Gcaud2124.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2124.t1
Unique NameGcaud2124.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1492
Homology
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IGA3_9FLOR (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA3_9FLOR)

HSP 1 Score: 1489 bits (3856), Expect = 0.000e+0
Identity = 818/1331 (61.46%), Postives = 1013/1331 (76.11%), Query Frame = 0
Query:    1 MPTEEAVRSPG-GDDHPDEQLPPASPKHVFDDEIEMQTQSV-------VDGASSQPADDDDDSPTSKH------EANPSQSQLDPAPTNTQPETEAPSXXXXXXXXXRDENDDA--EQDHAETVAQTSSYLFEKILEKPARAPGLVSAWMSHVSINGPEAMASLVSLVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLAKDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIRALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQNAKSTKNRGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSDRVYRTMFICRYRDISADVRSLSISALGGWIIMFPEQFLDDTHNKYIGWLLSDKDAGVRKTSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIRLLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEIRRAAGEFLATLVTMDIDDVGASVTKPKRAYRKRGGRRSSSGPFNTLLREIPPVERAKDDIRELLYAMARKEDDPVEEVLAVDSTWDHLPALRCWQAFEELLCENHESSXXXXXXEALSEAEKGMLCKMLLASAAEASGNGDPNRAKIIEKGEYADPETPSVLLSKQFLPQLPGLLSQYQSDSTAVSALIQLPLHFTMSTFDQQGQDSHFSALLERIIGVLLKHTGSEDVTAACAKTLRYFLSDQNPLKKTTSTSLQLCCQRATKELSLQVRADLSKSEPDNIAALVSQVRVLAELVDTGLTTYEAVKEVLLFQENNLESSELGPLVTMDTVRVACAFAVWSLSRIKSRIASKGSSETPLEDVLDLEEVKEYRKHGADVVDVLQRICVNSSMAIPVRLISARCILIILTLCRGIEKNTVMMIIRERTDPGTSGGA-PDLDILSLKDSVPSLVKVMRSIVFALVECELDQHRSRSSRRSSNISTPDEGDCRDFFACLVQASLQSLLSRSISHLPLFGMLLKGEREERGSESHEYTTSHICRDYLQQRQIRRTALTQDIIRALGEVFALECTKEEHQNIIRELAESCVSFKYRRDLKAKASTELLQALIDHCTSSATEEDFVRRLQLLSLASYAVVNCVSQEDGKMAKEQISAIDPHLAKHKDAVNEDLMKMFDLCRSSITAVADGKTPDLPAFSKLIDRPTSNRGISSRRRKRRIHTPKAHTPPPEPVTVRKSSRARKKVDYARMEIYESDEDXXXXEVSS-EQGKEDASPSEPTVADVARNMMEYENSPIAVRKRASREVPSADLSPAKRRRRNLNDALEKEMTDPAERSE 1313
            MP EE   SPG GD   D+Q  P+SPKHVFDD++EMQ+ SV        DG+ S     +    T+        E N       P P +T P +   +             DD   EQ + ++  Q S  LF+ +L KP+ +PGLV+AWMSHVSINGPEAMA++VSLVISAARPVPF+ +QLVTS+MIIAN+P E V+++CQ++AVDAPE+VVVLAKDT SR+VRR YED WRR+AAEAPDIVLYHTDCF+TLIPWL++MSSS IRALRVSA +AAYRLVDGFIEV +QLRK+L+SIQRQLNTEKRRSGI+ R+ +A+  K R           XXXXXXXXXXXXXXXXXXXXX ELSDRVYR++FI RYRDI ADVRS+S+SALGGWI+MFP+QFLDDTHNKYIGWLLSDKDA VRKTSL+VLHRMLKKK+YFANFETFLQRF DRI +MA DK+D VA TAIRLLNFLLPHN+N KLLRP+ CESIC IAL D HT++RRAAGEFL T+VTMDIDDV +S +K  R  RKR G+R+S+GPFNTLLREIPPVERA++DIRELL+A+ RK +D V+  LAVD+ WD+LP+LRCWQAFEELL E+ +        EALS++EKG+LC+MLLASAAEASGNGDP RA+I+EKGEY+DPETP  LLSK FLP LP LLSQYQSD   +S L+QLP HFTM+TF+QQGQD HFSA+LERIIGVL+KHTGSE+V++ACA+TLR FLS+QNPLKK T TSLQLCCQR +K+L+LQ+R DL+K+EPDN+AAL+SQ+R+L ELVD+  +TYE VKEVL FQE N + S L   VT+D  R ACAFAVWSLS+I+SR+ + GSS+T  E +++LEEV+EYR  GADV+D+LQRIC   S+ + VRL+ +RCILI+LTLCRGIEKN  MMI+R+RT+   +  A PDLD+LSLK+++P LV + RS+V  LVE EL     R S R+   +   E + RDFFA LVQASLQSLLSR ISHLPLFG+L+K  R+E  +ES+EYT+  +CRDYLQQRQIR  AL++DI+ AL EV  L+C K+E Q+IIRELA+ CVSF++RRDLKAK S +LL AL DHC  ++   DFV +L +LS +S+A+++  SQED K     +  ID    K+ +A++++L+ +FD   SS+ A+ADG+ P+LP   +  +RP S RG  S+R      +P +HTPPPEP  VRKSSR + +VDYARME Y  D++    E    EQ  ED   +  T ADVARNMMEY+NSP+A+RKRA+REVP A  +P KR RR+ N +  +E +   +R E
Sbjct:    1 MPPEERPSSPGPGDGSDDDQ--PSSPKHVFDDDVEMQSISVNPTHPQDSDGSPSTVPQGEGGQTTANQTNMQDAEQNQHSKNSTPLPAHTDPSSSHETAGDPPRRVVEPSQDDQALEQPNQDSSVQ-SPLLFDTMLHKPSSSPGLVTAWMSHVSINGPEAMAAIVSLVISAARPVPFSREQLVTSDMIIANEPQEIVRDLCQVLAVDAPEKVVVLAKDTPSRRVRRTYEDFWRRVAAEAPDIVLYHTDCFETLIPWLESMSSSPIRALRVSASLAAYRLVDGFIEVGTQLRKHLASIQRQLNTEKRRSGISQRNDSARGAKKRAAQGKDKKKELXXXXXXXXXXXXXXXXXXXXXXELSDRVYRSIFIGRYRDIYADVRSMSLSALGGWIMMFPDQFLDDTHNKYIGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETFLQRFCDRIIDMACDKDDTVAATAIRLLNFLLPHNSNDKLLRPAQCESICDIALEDHHTDVRRAAGEFLTTMVTMDIDDVPSSASKRSRVQRKRNGKRTSTGPFNTLLREIPPVERAREDIRELLFAIVRKGEDGVDAALAVDAVWDYLPSLRCWQAFEELLLEDQQPDTASQDGEALSDSEKGVLCEMLLASAAEASGNGDPMRARIVEKGEYSDPETPGTLLSKHFLPLLPRLLSQYQSDPKTISTLVQLPRHFTMTTFEQQGQDGHFSAMLERIIGVLVKHTGSEEVSSACAETLRNFLSEQNPLKKATCTSLQLCCQRVSKDLALQIRTDLAKAEPDNVAALMSQLRILTELVDSDSSTYEVVKEVLEFQERNGDLSGLNDHVTIDASRSACAFAVWSLSKIRSRLITTGSSQTSHEKIMELEEVQEYRNQGADVIDILQRICACDSVPLAVRLLCSRCILIVLTLCRGIEKNMSMMILRKRTESDNASPADPDLDLLSLKETIPQLVDMTRSVVTTLVEYELKLSSPRGSGRNRGQAGLQEREVRDFFASLVQASLQSLLSRHISHLPLFGVLIK-PRKEAKAESNEYTSFRVCRDYLQQRQIRGNALSRDIVGALHEVLKLQCDKKERQSIIRELADICVSFRHRRDLKAKGSIDLLHALFDHCVEASDATDFVGKLFVLSSSSFALISHFSQEDAKGMMGSMKTIDDLRNKYAEALDDELIDLFDHFHSSLEAIADGRPPELPPMMRASERPRSQRGPRSKRXXXXXTSPSSHTPPPEPSNVRKSSRQKARVDYARMENYSGDDNEDGDEEGILEQDSEDIKTTATTAADVARNMMEYQNSPVAIRKRANREVPDASPNPPKRTRRSNNSSNNRETSPKLQRPE 1327          
BLAST of Gcaud2124.t1 vs. uniprot
Match: R7QBF1_CHOCR (SCD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBF1_CHOCR)

HSP 1 Score: 684 bits (1766), Expect = 5.810e-217
Identity = 416/1157 (35.96%), Postives = 649/1157 (56.09%), Query Frame = 0
Query:  101 EQDHAETVAQTSSYLFEKILEKPARAPGLVSAWMSHVSINGPEAMASLVSLVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLAKDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIRALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQNAKSTKNRGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSDRVYRTMFICRYRDISADVRSLSISALGGWIIMFPEQFLDDTHNKYIGWLLSDKDAGVRKTSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIRLLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEIRRAAGEFLATLVTMDIDDVGAS--VTKPKRAYRKRGGRRSSSGPFNTLLREIPPVERAKDDIRELLYAMARKEDDPVEEVLAVDSTWDHLPALRCWQAFEELLCENHESSXXXXXXEALSEA----------EKGMLCKMLLASAAEASGNGDPNRAKIIEKGEYADPETPSVLLSKQFLPQLPGLLSQYQSDSTAVSALIQLPLHFTMSTFDQQGQDSHFSALLERIIGVLLKHTGSEDVTAACAKTLRYFLSDQNPLKKTTSTSLQLCCQRATKELSLQVRADLSKSEPDNIAALVSQVRVLAELVDTGLTTYEAVKEVLLFQENNLESSELGPLVTMDTVRVACAFAVWSLSRIKSRIASKGSSETPLEDVLDLEEVKEYRKHGADVVDVLQRICVNSSMAIPVRLISARCILIILTLCRGIEKNTVMMIIRERTDPGTSGGAPDLDILSLKDSVPSLVKVMRSIVFALVECEL---DQHRSRSSRRSSNI-STPDEGDCRDFFACLVQASLQSLLSRSISHLPLFGMLLKGEREERGSE-SHEYTTSHICRDYLQQRQIRRTALTQDIIRALGEVFALECTKEEHQ-NIIRELAESCVSFKYRRDLKAKASTELLQALIDHCTSS-ATEEDFVRRLQLLSLASYAVVNCVSQEDGKMAKEQISAIDPHLAKHKDAVNEDLMKMFDLCRSSITAVADGKTPDLPAFSKLIDRPTS-NRGISSRRRKRRIHTPKAH--TPPPEPVTVRKSSRARKKVDYARMEIYESDED 1235
            E D  E +      LF K+   P+   GLV+ W++ V +NGP A+A ++SLV+  ARP+       +T +M++ANDP  SV  +  ++  D P  V    KD+ S+K+RRAYED WRR+ AE+  +VL+ TDCFDTLI WLDAM+++  RALR++AC+AA+RLVDG I+   +LRK LSS+QRQL TEKRR G+  +   A   K R                                  LS +V+ ++ + +YRD+SA++R +S++ALG WI+  P+ FLDD H KYIGWLLSDK+  VR+++L+VL RML+KKD++++ E FLQRF DRI EMA DK+D VAV AIRLL  L    +   +   +   SIC IAL +S T++RRAAGEFL+ ++T    +  +       +R   K+  + +S    N  L EIP ++R+ DDI++L+   +    D       VD+ WDHLPALRCW+A+ +L   +   +           A          +  + C++LLASA EASG+GDP R+ ++++GE    ETP    S +FLP+L  LL Q+Q+D  A+ AL+QLP+ F M   +++G + H + +L R++ ++ +HTGS  +   CA+TL++  SD +P K    T+LQ  C  A+K+LS+ VRAD+S +EP +I+A + +VRV++EL +  ++ Y +  +VL +Q  N  +S+L   +T D VR  CA   W L++I++R+ S  S       V D   VK+ R  GA+++D+L +IC ++S +I  R++  + +L  LTLC G+E                S G    D L  ++    +   ++    A++E EL   D +  R S   S       E + RD FA LVQASLQS LS  I+HLP+ G+L++ ++        +E++   +C+ Y QQRQ+++T   +    AL EV  +   K EH    +R L ++ ++ +     K  A+ +LL+ LI    +     ED  + +++L+ A +A++  ++  D ++    +  I   +         +++ +     S + + A  + PD+P   K + R T+  R  SSRRRKR      A+  +   +   VR+S R+ K++DYAR+   E +ED
Sbjct:   28 EDDQDEVLEPAEDDLFSKLAAAPSSVAGLVTEWLALVQVNGPAAVADVLSLVVRLARPIGCPPLAAITPQMVVANDPSSSVLRISHLLREDVPGPVPTAGKDSVSKKLRRAYEDFWRRLTAESSKVVLFDTDCFDTLISWLDAMTTAKSRALRMAACLAAFRLVDGLIDFGGRLRKELSSMQRQLATEKRRCGMAPKQPRAAGRKKRSKKGVDLPIALSKKGKDLTRKVDEMTAHNSELIALSSKVFDSILVLKYRDVSAEIRQISVTALGCWILSCPDHFLDDKHTKYIGWLLSDKEPVVRRSTLEVLSRMLRKKDFYSSLEMFLQRFCDRITEMARDKDDTVAVAAIRLLTTL----SGFDIFDENVKVSICHIALKESQTDVRRAAGEFLSRMITSTTSEKSSRKCADSTRRDLLKKKLKPASGDVQNPALLEIPALDRSMDDIQQLMAKCSGVVRDIRAVDQVVDAVWDHLPALRCWEAYMKLFKTDRNMTGERILSTTTPHAKGKEGSSGGEDHALTCEILLASAREASGHGDPQRSSVVQRGERDSIETPCTKFSAEFLPELSHLLVQFQADVRALCALVQLPMFFEMQYLEKEGIEVHLNDILSRLVDLISRHTGSLRLVKICAETLKFLSSDGSPCKNLAQTTLQRACSAASKDLSIHVRADISAAEPLSISAGLLRVRVMSELAEPNVSVYSSAVKVLQYQIQNSSTSKLTSDITTDAVRTGCAVIAWCLAKIRARLESDKSDHADYGLVDDA--VKDARDRGAELIDILAQICHSNSFSISCRMLCLQGLLTALTLCAGVESFY------------KSKGFSRPDFLGAREVSRDIADAVKVCTLAIIEFELAAVDSNLMRDSHDGSKAHGHQPEMEVRDCFASLVQASLQSALSAKIAHLPMLGLLVRAKKHLSSDPIPYEWSCIQLCKRYCQQRQVKKTIRIEQERMALREVADI---KTEHLFQPVRRLTDNILALREPGTGKEAAARDLLECLIGSVVACYGKAEDVCKEVRVLTEAGFAILPHLTVNDARVLLPMLQPITDTILSDYVRDAGEMVAILSNFISCLKSRAANEVPDIPKLHKPLSRDTNIRRKQSSRRRKRTAVDGAAYHSSSHVDLSNVRRSKRSMKRLDYARLSGLEGEED 1163          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3J5C7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C7_9FLOR)

HSP 1 Score: 647 bits (1670), Expect = 2.160e-210
Identity = 351/634 (55.36%), Postives = 462/634 (72.87%), Query Frame = 0
Query:  682 MSTFDQQGQDSHFSALLERIIGVLLKHTGSEDVTAACAKTLRYFLSDQNPLKKTTSTSLQLCCQRATKELSLQVRADLSKSEPDNIAALVSQVRVLAELVDTGLTTYEAVKEVLLFQENNLESSELGPLVTMDTVRVACAFAVWSLSRIKSRIASKGSSETPLEDVLDLEEVKEYRKHGADVVDVLQRICVNSSMAIPVRLISARCILIILTLCRGIEKNTVMMIIRERTDPGTSGGA-PDLDILSLKDSVPSLVKVMRSIVFALVECELDQHRSRSSRRSSNISTPDEGDCRDFFACLVQASLQSLLSRSISHLPLFGMLLKGEREERGSESHEYTTSHICRDYLQQRQIRRTALTQDIIRALGEVFALECTKEEHQNIIRELAESCVSFKYRRDLKAKASTELLQALIDHCTSSATEEDFVRRLQLLSLASYAVVNCVSQEDGKMAKEQISAIDPHLAKHKDAVNEDLMKMFDLCRSSITAVADGKTPDLPAFSKLIDRPTSNRGISSRRRKRRIHTPKAHTPPPEPVTVRKSSRARKKVDYARMEIYESDEDXXXXEVSS-EQGKEDASPSEPTVADVARNMMEYENSPIAVRKRASREVPSADLSPAKRRRRNLNDALEKEMTDPAERSE 1313
            M+TFDQQGQD HFSA+LERIIGVL+KHTGSE+V++ACA+TLR FLS+QNPLKK T TSLQLCCQR +K+L+LQ+R DL+K+EPDN+AAL+SQ+R+L ELVD+  +TY+ VKEVL FQE N + S L   VT+D  R ACAF+V + S+I+SR+ + GSS+T  E +++LEEV+EYR  GADV+D+LQRIC   S+ + VRL+ +RCILI+LTLC GIEKN  MMI+R+RT+   +  A PDLD LSLK+++P LV + RS+V  LVE EL     R S R+   +   E + RDFFA LVQASLQSLLSR ISHLPLFG+L+K  R+E  +ES+EYT+  +CRDYLQQRQI   AL++DI+ AL EV  L+C K+E Q+IIRELA+ CV F++RRDLKAK S +LL AL DHC  ++   DFV +L +LS +S+A+++  SQED K     +  ID    K+ +A++++L+ +FD   SS  A+ADG+ P+LP   +  +RP S RG  S+R      +P +HTPPPEP  V KSSR + +VDYARME Y SD++    E    EQ  ED   +  T ADVARNMMEY+NSP+A+RKRA+REVP A LSP KR RR+ N +  ++ +   +R E
Sbjct:    1 MTTFDQQGQDGHFSAMLERIIGVLVKHTGSEEVSSACAETLRNFLSEQNPLKKETCTSLQLCCQRVSKDLALQIRTDLAKAEPDNVAALMSQLRILTELVDSDSSTYKVVKEVLEFQERNGDLSGLNDHVTIDASRSACAFSVCTFSKIRSRLITTGSSQTSHEKIMELEEVQEYRNQGADVIDILQRICACDSVPLAVRLLCSRCILIVLTLCHGIEKNMSMMILRKRTESDNASPADPDLDFLSLKETIPQLVYMTRSVVTTLVEYELKLSSPRGSGRNRGQAGLQEREVRDFFASLVQASLQSLLSRHISHLPLFGVLIK-PRKEAKAESNEYTSFRVCRDYLQQRQICGNALSRDIVGALHEVLKLQCDKKERQSIIRELADICVLFRHRRDLKAKGSIDLLHALFDHCAEASDATDFVGKLFVLSSSSFALISHFSQEDAKGMMGSMKTIDHLRNKYAEALDDELIDLFDHFHSSFEAIADGRPPELPPMMRASERPRSQRGPRSKRXXXXXXSPTSHTPPPEPSNVIKSSRQKARVDYARMENYSSDDNEDGDEEGILEQDSEDIKTTATTAADVARNMMEYQNSPVAIRKRANREVPDASLSPPKRTRRSNNSSNNRKTSPKLQRPE 633          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IY21_9FLOR (Cohesin subunit SA-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY21_9FLOR)

HSP 1 Score: 584 bits (1505), Expect = 6.290e-192
Identity = 323/454 (71.15%), Postives = 385/454 (84.80%), Query Frame = 0
Query:  119 ILEKPARAPGLVSAWMSHVSINGPEAMASLVSLVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLAKDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIRALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQNAKSTKNRGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSDRVYRTMFICRYRDISADVRSLSISALGGWIIMFPEQFLDDTHNKYIGWLLSDKDAGVRKTSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIRLLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEIRRAAGEFLATLVTMDIDDVGASVTKPKRAYRKRGGRRSSSGPFNTLLREIPPVERAKDDIRELLYAMARKEDDPVEEVLAVDSTWDH 572
            +L KP+ +PGL +AWMSHVSINGPEAMA++VSLVISAARPVPF+ +QLVTS+MIIAN+P ESV+++CQ++AVDAPE+VVVLAK+T SR+VRR YED WRR+A+E PDIVLY TDCF+TLIPWL++MS S I+ LRVSA +AAY  VDGFI+V +QLRK L+SIQRQL TEKRRSGI+ R+ +A+  K R    XXXXXXXXXXXXXXXXXXXXXXXXXXXX ELSD+VYR++FI RYRD  A+VRS+S+SALGGWI+MFP+  LD+THNK IGWLLSDKDA VRKTSL+VLHRMLKKK+YFANFETFLQRF DRI +MA DK+D VA  AIR LNFLLPHN+N KLLRP+ CESIC IAL D H ++RRAAGE L T+VTMDIDDV +S +K  R  RKR G+R+ +GPFNT+LREIPPVERA + IRELL+A+ R  DD V+  L VD+ WD+
Sbjct:    1 MLHKPSSSPGLFTAWMSHVSINGPEAMAAIVSLVISAARPVPFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVVLAKNTPSRRVRRTYEDFWRRVASETPDIVLYDTDCFETLIPWLESMSGSPIQTLRVSATLAAYGRVDGFIKVGTQLRKQLASIQRQLYTEKRRSGISQRNDSARGAKKRAAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDKVYRSIFIGRYRDTYANVRSMSLSALGGWIMMFPDHVLDETHNKCIGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETFLQRFCDRIIDMACDKDDTVAANAIRFLNFLLPHNSNDKLLRPAQCESICDIALEDHHRDVRRAAGELLTTMVTMDIDDVPSSASKRSRVQRKRNGKRAYTGPFNTILREIPPVERAPEGIRELLFAIVRNGDDGVDAAL-VDAVWDY 453          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IQR7_9FLOR (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR7_9FLOR)

HSP 1 Score: 473 bits (1216), Expect = 6.460e-151
Identity = 266/367 (72.48%), Postives = 316/367 (86.10%), Query Frame = 0
Query:  119 ILEKPARAPGLVSAWMSHVSINGPEAMASLVSLVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLAKDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIRALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQNAKSTKNRGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSDRVYRTMFICRYRDISADVRSLSISALGGWIIMFPEQFLDDTHNKYIGWLLSDKDAGVRKTSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIRLLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEI 485
            +L KP+ +PGLV+AWMSHVSINGPEAMA+++SLVISAARPVPF+ +QLVT +MIIANDP ESV+++CQ++AVD PE+VVVLAK+T SR+VRR YED WRR+A+EAPD+VLY TDCF+TLIPWL++MS S IRALR+SA +AAYRLVDGFIEV +QLRK L+SIQRQLNTE+RRSGI+ R+ + +  K R    XXXXXXXXXXXXXXXXXXXXXXXXXXXX ELSD VYR+ FI RY DI A+VRS+S+ ALGGWI+MFP+QFLDDTHNKY GWLLSDKDA VRKTSL+VLHRMLKKK+YFANFET+LQRF  RI +MA +K+D VA TAIR +NFLLPHN+  KLLRP+    IC IAL D  T++
Sbjct:    1 MLHKPSSSPGLVTAWMSHVSINGPEAMAAIMSLVISAARPVPFSREQLVTLDMIIANDPQESVRDLCQVLAVDEPEKVVVLAKNTPSRRVRRTYEDFWRRVASEAPDVVLYDTDCFETLIPWLESMSGSPIRALRISASLAAYRLVDGFIEVGTQLRKQLASIQRQLNTERRRSGISQRNDSTRVAKKRAAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSDGVYRSTFIGRYHDIYANVRSMSLPALGGWIMMFPDQFLDDTHNKYTGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETYLQRFCHRIIDMACNKDDTVAATAIRSINFLLPHNSTDKLLRPAQIARICDIALEDHPTDV 367          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IWQ0_9FLOR (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWQ0_9FLOR)

HSP 1 Score: 422 bits (1085), Expect = 1.820e-132
Identity = 213/336 (63.39%), Postives = 270/336 (80.36%), Query Frame = 0
Query:  613 MLLASAAEASGNGDPNRAKIIEKGEYADPETPSVLLSKQFLPQLPGLLSQYQSDSTAVSALIQLPLHFTMSTFDQQGQDSHFSALLERIIGVLLKHTGSEDVTAACAKTLRYFLSDQNPLKKTTSTSLQLCCQRATKELSLQVRADLSKSEPDNIAALVSQVRVLAELVDTGLTTYEAVKEVLLFQENNLESSELGPLVTMDTVRVACAFAVWSLSRIKSRIASKGSSETPLEDVLDLEEVKEYRKHGADVVDVLQRICVNSSMAIPVRLISARCILIILTLCRGIEKNTVMMIIRERTDPGTSGGA-PDLDILSLKDSVPSLVKVMRSIVFALVE 947
            MLLASAAEAS NGDP RA+I+EKGEY+DP TP  LLSK FLP LP LLSQYQSD   +S L++LP HFTM+TF+QQ QD HFSA+L+RIIGV++ HTGSE+V++ACA+TLR FLS+QNPLKK T TSLQLCCQR +K+L+LQ R DLSK+EPDN+AAL+SQ+R+L ELVD+  +TYE VK+VL FQE N + S L   VT+D    ACAFAVWSLS+I+SR+ + GSS+T  E +++LEE++EYR  GADV+D+LQRIC   S+ + VRL  +RCILI+LTLCRGIEKN  MMI+R+RT+   +  A PDL++LSLK+++P LV + RS+V  L E
Sbjct:    1 MLLASAAEASRNGDPMRARIVEKGEYSDPRTPGTLLSKHFLPLLPRLLSQYQSDPKTISTLVELPRHFTMTTFEQQDQDGHFSAMLDRIIGVMVNHTGSEEVSSACAETLRNFLSEQNPLKKATCTSLQLCCQRVSKDLALQFRTDLSKAEPDNVAALMSQLRILTELVDSDSSTYEVVKDVLEFQERNGDLSGLNDHVTIDASLSACAFAVWSLSKIRSRLITTGSSQTSHEKIMELEELQEYRNQGADVIDILQRICACDSVPLAVRLFCSRCILIVLTLCRGIEKNMSMMILRKRTESDNASPADPDLNLLSLKETIPQLVDMTRSVVTTLFE 336          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3J680_9FLOR (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J680_9FLOR)

HSP 1 Score: 399 bits (1024), Expect = 7.840e-125
Identity = 192/266 (72.18%), Postives = 226/266 (84.96%), Query Frame = 0
Query:  376 MFPEQFLDDTHNKYIGWLLSDKDAGVRKTSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIRLLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEIRRAAGEFLATLVTMDIDDVGASVTKPKRAYRKRGGRRSSSGPFNTLLREIPPVERAKDDIRELLYAMARKEDDPVEEVLAVDSTWDHLPALRCWQAFEELLCENHESSXXXXXXEALSEAEKGMLCKMLLASAAEASGNGDPNRAKIIEKGEYADP 641
            MF +QFLDDTHNKYIGWLLSDKDA VRKTSL+VLHRMLKKK+YFANFETFLQRF DRI +MA DK+D VA TAIRLLNFLLPHN+N KLLRP+ CESIC IAL D HT++RRAAGEFL T+VTMDIDDV +S +K  R  RKR G+R+ +GPFNTLLREIPPVE A++DIR LL+A+ RK DD V+  LAVD+ WD+LP+LRCWQAFEELL E+ +        EALS++EKG+LC+M+LASAAEASGNGDP +A+I+EKGEY+DP
Sbjct:    1 MFRDQFLDDTHNKYIGWLLSDKDAVVRKTSLEVLHRMLKKKEYFANFETFLQRFCDRIIDMACDKDDTVAATAIRLLNFLLPHNSNDKLLRPAQCESICDIALEDHHTDVRRAAGEFLTTMVTMDIDDVPSSASKRSRVQRKRNGKRACTGPFNTLLREIPPVEGAREDIRALLFAIVRKGDDGVDAALAVDAVWDYLPSLRCWQAFEELLLEDQQPDTASQDGEALSDSEKGVLCEMILASAAEASGNGDPMQARIVEKGEYSDP 266          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IQS1_9FLOR (Sister-chromatid cohesion protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS1_9FLOR)

HSP 1 Score: 312 bits (800), Expect = 1.620e-93
Identity = 181/259 (69.88%), Postives = 218/259 (84.17%), Query Frame = 0
Query:  123 PARAPGLVSAWMSHVSINGPEAMASLVSLVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLAKDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIRALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQNAKSTKNRGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSDRVYRTMFICRYRDISADVRSLSISALGGWIIMFPEQF 381
            P+ +PG V+AWMSH SINGPEAM +++ L ISAARPV F+ +QLVTS+MIIAN+P ESV+++CQ++AVDAPE+VV+L K+T SR+VRR YE+ WR +A+EA DIVLY TDCF+TLIPWL++MSSS IRALRVSA +AAYRLVD FI+V +QLRK LSSIQRQLNTEKRRSGI+ R+ + +  K R           XXXXXXXXXXXXXXXXXXXXXTELSDRVYR+ FI RYRDI ADVRS+S+SALGGWI+MFP+QF
Sbjct:    2 PSSSPGFVTAWMSHGSINGPEAMTAILFLAISAARPVTFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVMLEKNTPSRRVRRTYEEFWRHVASEASDIVLYDTDCFETLIPWLESMSSSPIRALRVSASLAAYRLVDWFIKVGTQLRKQLSSIQRQLNTEKRRSGISQRNDSTRVAKKRAAQGKGKKKELXXXXXXXXXXXXXXXXXXXXXTELSDRVYRSTFIGRYRDIHADVRSMSLSALGGWIMMFPDQF 260          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IFY1_9FLOR (Cohesin subunit SA-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY1_9FLOR)

HSP 1 Score: 302 bits (774), Expect = 4.880e-90
Identity = 160/254 (62.99%), Postives = 195/254 (76.77%), Query Frame = 0
Query:  119 ILEKPARAPGLVSAWMSHVSINGPEAMASLVSLVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLAKDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIRALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQNAKSTKNRGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSDRVYRTMFICRYRDISADVRSLSISALGG 372
            +L KP+  PGL +A MSHVSING EAM+++V LVISAARPVPF+ +QLVTS+MIIAN+P ESV+++CQ++AVDAPE+VVVLAKDT SR+VRR YED WRR+AAEAPDIVLYHTDCF+TLI WL++M SS IRALR+SA  AAYRLVDGFIEV +QLRK L+SIQRQL+TEKR SGI+ R+ +A+  K R                                TELSDRVYR++FI R+RDI A+VRS+S+SALGG
Sbjct:    1 MLHKPSSPPGLFTACMSHVSINGLEAMSAIVFLVISAARPVPFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVVLAKDTPSRRVRRTYEDFWRRVAAEAPDIVLYHTDCFETLILWLESMCSSPIRALRLSASFAAYRLVDGFIEVGTQLRKRLASIQRQLSTEKRDSGISQRNDSARGAKKRPAQGKEKKKELSPKGKALANKVDELNAKNSEITELSDRVYRSIFIDRHRDIYAEVRSMSLSALGG 254          
BLAST of Gcaud2124.t1 vs. uniprot
Match: A0A2V3IFW1_9FLOR (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFW1_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 5.990e-89
Identity = 145/224 (64.73%), Postives = 173/224 (77.23%), Query Frame = 0
Query:  404 TSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIRLLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEIRRAAGEFLATLVTMDIDDVGASVTKPKRAYRKRGGRRSSSGPFNTLLREIPPVERAKDDIRELLYAMARKEDDPVEEVLAVDSTWDHLPALRCWQAFEELLCENHESSXXXXXXEALSEAEKGMLCKMLLASAAEASGNGDP 627
            TSL+VLH MLKKK+YFANFETFLQRF D I +MA DK+D VA TAIRLLNFLLPHN+N + LRP+ C SIC IA  + HT++RRAAGEFL  +VTMDIDDV +  +K     RKR GRR+S+GPFNT LR IPP++RA++DIRELL+A+ RK DD V+  LAVD+ WD LP+LRCW AFEELL E  +        EALS +EKG+ C MLLASAAEASGN +P
Sbjct:    2 TSLEVLHHMLKKKEYFANFETFLQRFCDHIIDMACDKDDTVAATAIRLLNFLLPHNSNDRFLRPAQCPSICDIAFENHHTDVRRAAGEFLTNMVTMDIDDVPSFASKQSHVQRKRNGRRTSTGPFNTFLRAIPPIQRAREDIRELLFAIVRKGDDRVDAALAVDAVWDSLPSLRCWHAFEELLLEEQQPDTASPDGEALSNSEKGLFCGMLLASAAEASGNLNP 225          
The following BLAST results are available for this feature:
BLAST of Gcaud2124.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGA3_9FLOR0.000e+061.46Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
R7QBF1_CHOCR5.810e-21735.96SCD domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3J5C7_9FLOR2.160e-21055.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY21_9FLOR6.290e-19271.15Cohesin subunit SA-2 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IQR7_9FLOR6.460e-15172.48Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IWQ0_9FLOR1.820e-13263.39Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3J680_9FLOR7.840e-12572.18Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IQS1_9FLOR1.620e-9369.88Sister-chromatid cohesion protein 3 n=1 Tax=Gracil... [more]
A0A2V3IFY1_9FLOR4.880e-9062.99Cohesin subunit SA-3 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IFW1_9FLOR5.990e-8964.73Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
NoneNo IPR availableCOILSCoilCoilcoord: 315..335
NoneNo IPR availableCOILSCoilCoilcoord: 538..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1388..1402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1229..1244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1213..1228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1175..1491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1433..1459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1273..1385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109
NoneNo IPR availablePANTHERPTHR11199:SF0LD34181P-RELATEDcoord: 44..830
IPR013721STAGPFAMPF08514STAGcoord: 200..296
e-value: 4.8E-15
score: 55.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 333..565
e-value: 3.2E-10
score: 42.2
IPR039662Cohesin subunit Scc3/SAPANTHERPTHR11199STROMAL ANTIGENcoord: 44..830
IPR020839Stromalin conservative domainPROSITEPS51425SCDcoord: 351..436
score: 27.439566
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 231..893

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_778_length_18212_cov_4.691463contigNODE_778_length_18212_cov_4.691463:1673..6148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2124.t1Gcaud2124.t1Gracilaria caudata M_176_S67 malemRNANODE_778_length_18212_cov_4.691463 1673..6148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2124.t1 ID=Gcaud2124.t1|Name=Gcaud2124.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1492bp
MPTEEAVRSPGGDDHPDEQLPPASPKHVFDDEIEMQTQSVVDGASSQPAD
DDDDSPTSKHEANPSQSQLDPAPTNTQPETEAPSQAPAQTSTPRDENDDA
EQDHAETVAQTSSYLFEKILEKPARAPGLVSAWMSHVSINGPEAMASLVS
LVISAARPVPFAHDQLVTSEMIIANDPPESVKEMCQIMAVDAPERVVVLA
KDTASRKVRRAYEDLWRRIAAEAPDIVLYHTDCFDTLIPWLDAMSSSLIR
ALRVSACIAAYRLVDGFIEVNSQLRKNLSSIQRQLNTEKRRSGINVRDQN
AKSTKNRGPSAKGKKKELSAKGKELVNKVDELTAKNIELTELSDRVYRTM
FICRYRDISADVRSLSISALGGWIIMFPEQFLDDTHNKYIGWLLSDKDAG
VRKTSLDVLHRMLKKKDYFANFETFLQRFSDRIFEMAWDKEDIVAVTAIR
LLNFLLPHNNNSKLLRPSHCESICAIALGDSHTEIRRAAGEFLATLVTMD
IDDVGASVTKPKRAYRKRGGRRSSSGPFNTLLREIPPVERAKDDIRELLY
AMARKEDDPVEEVLAVDSTWDHLPALRCWQAFEELLCENHESSSNNEEEE
ALSEAEKGMLCKMLLASAAEASGNGDPNRAKIIEKGEYADPETPSVLLSK
QFLPQLPGLLSQYQSDSTAVSALIQLPLHFTMSTFDQQGQDSHFSALLER
IIGVLLKHTGSEDVTAACAKTLRYFLSDQNPLKKTTSTSLQLCCQRATKE
LSLQVRADLSKSEPDNIAALVSQVRVLAELVDTGLTTYEAVKEVLLFQEN
NLESSELGPLVTMDTVRVACAFAVWSLSRIKSRIASKGSSETPLEDVLDL
EEVKEYRKHGADVVDVLQRICVNSSMAIPVRLISARCILIILTLCRGIEK
NTVMMIIRERTDPGTSGGAPDLDILSLKDSVPSLVKVMRSIVFALVECEL
DQHRSRSSRRSSNISTPDEGDCRDFFACLVQASLQSLLSRSISHLPLFGM
LLKGEREERGSESHEYTTSHICRDYLQQRQIRRTALTQDIIRALGEVFAL
ECTKEEHQNIIRELAESCVSFKYRRDLKAKASTELLQALIDHCTSSATEE
DFVRRLQLLSLASYAVVNCVSQEDGKMAKEQISAIDPHLAKHKDAVNEDL
MKMFDLCRSSITAVADGKTPDLPAFSKLIDRPTSNRGISSRRRKRRIHTP
KAHTPPPEPVTVRKSSRARKKVDYARMEIYESDEDDDDEEVSSEQGKEDA
SPSEPTVADVARNMMEYENSPIAVRKRASREVPSADLSPAKRRRRNLNDA
LEKEMTDPAERSEDQNHQSSTHKNSSTHHTEFDHVSQPDDGESSDQNSSE
KSHSQEVGKGEKVEESENNDEHSNESWERRSKRVSASKKAGQVAQSKGKQ
NGRRSGRNPKHGNLEGSSEADVASKVDGSEVVDENRSSSQQSLGKPGATV
NGSRTQVRSKETTEATEESEMKKSTPSSTGNVVRRRKLRRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013721STAG
IPR011989ARM-like
IPR039662Cohesin_Scc3/SA
IPR020839SCD
IPR016024ARM-type_fold