Gcaud7620.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7620.t1
Unique NameGcaud7620.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length362
Homology
BLAST of Gcaud7620.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 268 bits (685), Expect = 6.650e-84
Identity = 144/360 (40.00%), Postives = 208/360 (57.78%), Query Frame = 0
Query:    1 MVLVPLKSQYVSLIISFFSLFAELALLHATLKFNGYFECRGLRKGDEVSVSRHQRRVGVFSILALLAFLALEIITSFFSDPTVRKTLVYQRCVAVDGLDRRDGSNGVRIEEDFVSMRCNNFRDQNILYRAGNYSFEEERVRCSPTDLVELKTEPVFEYLLDGARRPSAQEPNPNPLLHCTDGFCVVVATGTPSLMESQNGTLLKIAQIFEESSLEALRESRPPMRYIETIVFF--DFSGLQPVFAKRALDPNSRRIPDPVELVRRIYLGSETTVCPFEKNLGDATSIPLALVIVISVIWLLSFLTCISSLFISARIFYDISNPIHWAKHTRHKVDEMIEGDPVISTIDEGGRRVVQVSES 358
            MVL+PLKSQYVSLI +  SL  EL+LL A L+ N Y EC  L+KG  VSV+RHQ R     ++   AF A+E++ SF+SDP V+ T   Q CVAV+ L RR G  G  +EE  + + C    + NI  R GNYS E  +V C+ +  +    EP     +  A   S++ P P+PLL C DGFCVV+ T   S   S + T +  + +F    +  L+    P++++ T +F   + + L P FA+R L      + DP EL R ++LGSE   C F++   +AT +P  +++ +S +W++S      +L +S R+FYDISNP+HWAK T  + DE + GDP +S + E G  V+ VS S
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPIGTAAAVSSENPFPDPLLKCADGFCVVIQTA--SYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRT-SEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLENGHHVMYVSGS 357          
BLAST of Gcaud7620.t1 vs. uniprot
Match: A0A2V3IT05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 227 bits (579), Expect = 1.550e-67
Identity = 138/371 (37.20%), Postives = 204/371 (54.99%), Query Frame = 0
Query:    1 MVLVPLKSQYVSLIISFFSLFAELALLHATLKFNGYFECRGLRKGDEVSVSRHQRRVGVFSILALLAFLALEIITSFFSDPTVRKTLVYQRCVAVDGLDRRDGSNGVRIEEDFVSMRCNNFRDQNILYRAGNYSFE---EERVRCSPTDLVELKTEPVFEYLLDGARRPSAQEPN-------PNPLLH---CTDGFCVVVATGTPSLMESQNGTLLKIAQIFEESSLEALRESRPPMRYIETIVFFDFSGLQPVFAKRALDPNSRRIPDPVELVRRIYLGSETTVCPFEKNLGDATSIPLALVIVISVIWLLSFLTCISSLFISARIFYDISNPIHWAKHTRHKVDEMIEGDPVISTIDEGGRRVVQVSES 358
            MV +PLKSQ+VSLI++  S  AEL L  A L FN Y EC  LRKG +VSV  H+ R    ++LA++ F+ LE+I SFFSDP +        C+AVD +D R+G  G   +EDF+ +RC   +    L RAGN+S     + RVRC    L E   E   ++ L    R    + +       P P +     T+  C  V    P+ +   N   + ++    ES +  L   +  + ++ET V ++ SGL   FA+R L    + + DP+E+ +R+++G E   C FE    D T++PL LV  I   W+LSFLT  S+L +   IFYD+S+P+HWA+ T   +DE I G+PV++++ E G R++ VS S
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTN---VYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGNPVVTSVYEHGERLMYVSGS 368          
BLAST of Gcaud7620.t1 vs. uniprot
Match: A0A2V3J5C2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 2.760e-46
Identity = 116/369 (31.44%), Postives = 177/369 (47.97%), Query Frame = 0
Query:    1 MVLVPLKSQYVSLIISFFSLFAELALLHATLKFNGYFECRGLRKGDEVSVSRHQRRVGVFSILALLAFLALEIITSFFSDPTVRKTLVYQRCVAVDGLDRRDGSNGVRIEEDFVSMRCNNFRDQNILYRAGNYSF-----------EEERVRCSPTDLVELKTEPVFEYLLDGARRPSAQEPNPNPLLHCTDGFCVVVATGTPSLMESQNGTLLKIAQIFEESSLEALRESRPPMRYIETIVFFDFSGLQPVFAKRALDPNSRRIPDPVELVRRIYLGSETTVCPFEKNLGDATSIPLALVIVISVIWLLSFLTCISSLFISARIFYDISNPIHWAKHTRHKVDEMIEGDPVISTIDEGGRRVVQVSES 358
            MVL+PLKSQY SLI++  S  AELALL A L FN Y ECR L+ G +V+V  H+ R    ++ A LAF+ LE+ +SF+SDP  +  LV + C ++D L  + G   +  +   V ++C           AGN S            ++E   C   +++         Y  +  R P   EP P+          VV   GT  +   ++G  +          +  +      +   +T + ++ +GL+  FA RA+D  S+ + D   L R ++ GS  T C F K   DAT +    +  I + W LS    + S  I  RIFYD+S+P+HWA+ T    D     +PV++T+ E G R + V+ S
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVL---------YTANVERAPD--EPVPDEY--------VVGCVGTSCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNF-KTFSDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALLVTRS 349          
BLAST of Gcaud7620.t1 vs. uniprot
Match: A0A2V3ISI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 3.530e-44
Identity = 112/358 (31.28%), Postives = 178/358 (49.72%), Query Frame = 0
Query:    1 MVLVPLKSQYVSLIISFFSLFAELALLHATLKFNGYFECRGLRKGDEVSVSRHQRRVGVFSILALLAFLALEIITSFFSDPTVRKTLVYQRCVAVDGLDRRDGSNGVRIEEDFVSMRCNNFRDQNILYRAGNYSFEEERVRCSPTDLVELKTEPVFEYLLDGARRPSAQEPNPNPLLHCTDGFCVVVATGTPSLMESQNGTLLKIAQIFEESSLEALRESRPPMRYIETIVFFDFSGLQPVFAKRALDPNSRRIPDPVELVRRIYLGSETTVCPFEKNLGDATSIPLALVIVISVIWLLSFLTCISSLFISARIFYDISNPIHWAKHTRHKVDEMIEGDPVISTIDEGGRRVVQVSES 358
            MVL+PLKSQY SLI +  S  AELALL A L +N Y ECR L  G  V+V  H+ R    ++ A LAF+ LE+  SFFSDP +++  V + C+++D L  R G   + +    V + C       +   AGN S + E ++C              ++L       S  EP P+   H  +  C++            NG+ +   +I  ++ L  + ++   +R  +T V+++ +G++    +R++      + D   L R ++ G+E T C F+     AT+I    +  I+V W LS    + SL I  R+FYD+S+P+ WA+ T    D     +PV++T  E G R V V+ S
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNISDDGE-IKCGD------------DFLFSADIHHSPNEPVPDE--HTME--CILDGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDV-FSPATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTRFVLVTRS 340          
BLAST of Gcaud7620.t1 vs. uniprot
Match: A0A2V3IUG0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG0_9FLOR)

HSP 1 Score: 80.9 bits (198), Expect = 2.850e-13
Identity = 81/359 (22.56%), Postives = 157/359 (43.73%), Query Frame = 0
Query:    3 LVPLKSQYVSLIISFFSLFAELALLHATLKFNGYFECRGLRKGDEVSVSRHQRRVGVFSILALLAFLALEIITSFFSDPTVRKTLVYQRCVAVDGLDR---RDGSNGVRIEEDFVSMRCNNFRDQNILYRAGNYSFEEERVRCSPTDLVELKTEPVFEYLLDGARRPSAQEPNPNPLLHCTDGFCVVVATGTPSLMESQNGTLLKIAQIFEESSLEALRESRPPMRYIETIVFFDFSGLQPVFAKRALDPNSRRIPDPVELVRRIYLGSETTVCPFEKNLGDATSIPLALVIVISVIWLLSFLTCISSLFISARIFYDISNPIHWAKHTRHKVDEMIEGDP------VISTIDEGGRRV 352
            ++PL + Y  L+ +  +   E+  + AT    G  EC  L     V ++ H+R   V  ++A++ F+ALE++ S F+ P        Q C  V+  +     + S+  R+ E+ V   C      NI+  +     E+       T  V+   E +F+Y  D        E +      C + FC +V+         ++GT + +++    +S ++   ++   ++  T + F+      + A + L    + + D +++ RR+ + S+   C F  +  + + +P  L+ +I  +W       I +  +   +FYDI NP HWA  T     ++I+GD       + ST  +G RR+
Sbjct:   17 IIPLPTLYTQLMFTAINAITEIGCVSATFVLIGLAECYALTTHRRVRLASHRRYHRVVQVVAMITFIALEVLISTFTKPHTHHIESKQNCTQVNRTENFLALNDSDERRMSEEMVLYSCLRTNSSNIINISTGVKSED-------TGAVQCNQEWIFQYENDRTDHEQFSERD-EVGKQCNEQFCTLVSL-------DRSGTRMFLSKPVPRASFDS-DNNKIDGKW--TNLNFNVQIDVKIMATKVLGLYEQGVFDELDVRRRLLVQSKKQECQFSSDRKEHSVLPFWLLGLIISMWGTCAFLFILTRVLKRGVFYDIDNPSHWACITDW---QLIQGDRRKHSAFLRSTTVDGVRRI 354          
The following BLAST results are available for this feature:
BLAST of Gcaud7620.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5A0_9FLOR6.650e-8440.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT05_9FLOR1.550e-6737.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C2_9FLOR2.760e-4631.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI7_9FLOR3.530e-4431.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUG0_9FLOR2.850e-1322.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 311..361
NoneNo IPR availableTMHMMTMhelixcoord: 288..310
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1187_length_12868_cov_4.471237contigNODE_1187_length_12868_cov_4.471237:6960..8045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7620.t1Gcaud7620.t1Gracilaria caudata M_176_S67 malemRNANODE_1187_length_12868_cov_4.471237 6960..8045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7620.t1 ID=Gcaud7620.t1|Name=Gcaud7620.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=362bp
MVLVPLKSQYVSLIISFFSLFAELALLHATLKFNGYFECRGLRKGDEVSV
SRHQRRVGVFSILALLAFLALEIITSFFSDPTVRKTLVYQRCVAVDGLDR
RDGSNGVRIEEDFVSMRCNNFRDQNILYRAGNYSFEEERVRCSPTDLVEL
KTEPVFEYLLDGARRPSAQEPNPNPLLHCTDGFCVVVATGTPSLMESQNG
TLLKIAQIFEESSLEALRESRPPMRYIETIVFFDFSGLQPVFAKRALDPN
SRRIPDPVELVRRIYLGSETTVCPFEKNLGDATSIPLALVIVISVIWLLS
FLTCISSLFISARIFYDISNPIHWAKHTRHKVDEMIEGDPVISTIDEGGR
RVVQVSESQRK*
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