Gcaud3009.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A2V3J103_9FLOR (Putative RNA-binding protein RbpE n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J103_9FLOR) HSP 1 Score: 329 bits (844), Expect = 1.250e-110 Identity = 169/278 (60.79%), Postives = 210/278 (75.54%), Query Frame = 0
Query: 1 MMAFLSGPPSIPLNTPGRQARSVCKCRPPVPRPARVVFSALIDEKKALSEPDSESVTGSVSPKTDEEGLLQPRAFTDNNDAAQPPSVSAPNEPRRYISRPRFQPDPEATYYTKCSKCSAAYELDPTVLGNGRRVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRR--RDRQPN-SRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRNS 275
MMAFLSGPP IP N PGR ARSVC RPPVPRP RV FSALIDE K LSEP + +T + +E + A+P + +PRR+ S PRF PDP A YYTKC+KCSAAYELDP VLGNGRRVACSVC NEWFQKP+RLF +RE+EQF++YPMD+K E+L++NQQN R R RR RDR+P ++ FSVFIGNLP+SV++QEL+E+I+++V PKR++IV D DG S+G+AFADV S EEV+Q+V +L +T + GRTIAVRPG++NS
Sbjct: 1 MMAFLSGPPLIPYNVPGRTARSVCSYRPPVPRPPRVFFSALIDESKPLSEPPRDLLTEPLHRDLPKESEPDSALPPEQRSVARPSRPTHSRDPRRFESPPRFTPDPNAVYYTKCAKCSAAYELDPLVLGNGRRVACSVCSNEWFQKPDRLFKMRETEQFSEYPMDRKAELLERNQQN-RARGGRRRDTRDRRPTYTKTFSVFIGNLPYSVTEQELTELISSVVKPKRISIVTDQDGNSKGFAFADVQSEEEVDQIVRSLDATRIAGRTIAVRPGKKNS 277
BLAST of Gcaud3009.t1 vs. uniprot
Match: R7QQ59_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ59_CHOCR) HSP 1 Score: 189 bits (481), Expect = 1.580e-55 Identity = 125/303 (41.25%), Postives = 166/303 (54.79%), Query Frame = 0
Query: 1 MMAFLSGPPSIPLNTPGRQARSVCKCRP-PVPRPARVVFSALIDEKKALSEPDSESVTGSVSPKTDEEGLLQPRAFTDNNDAAQPPSVSAPNEPR-----RYISRPRFQPDPEATYYTKCSKCSAAYELDPTVLG-NGRRVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQ----------NQRG-RNAGRRRD--------RQPNSRAFS---VFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRN 274
M AFL P + L+ G + +C RP P +PARV SA IDE P ++S+ P + A P + PR R RP F PDP ATY+TKC C AAY+LDP G G++VACSVCGN+WFQ+ +RL TLR+ +QF +YP+D+KDE++++ QQ N G R G RRD R+ NSR FS +FIGNLPF+ Q++L ++ +V RVAI+ D GRS+G+AFADV S E V+ V+ L + GR I VR GR+N
Sbjct: 1 MTAFLPTPGAPILSGRGTRGAQICSRRPAPSRQPARVYVSAAIDEA-----PPNDSIPVPRPPPQ------RXXXXXXXXXXAPTPYIYRGERPRPSGDYRGAPRPAFIPDPTATYFTKCGSCQAAYKLDPDFPGPRGKKVACSVCGNQWFQRADRLMTLRQGDQFKEYPVDQKDELMEKQQQLRMERFRARSNDGGDRRGGYRRDGPREGQGARRSNSRNFSPHSLFIGNLPFNTEQEDLERVVGQVVEFTRVAIIRDPTGRSKGFAFADVKSEEAVQMAVSKLDGKELGGRAITVREGRKN 292
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A6H5K2C5_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2C5_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.380e-25 Identity = 59/165 (35.76%), Postives = 86/165 (52.12%), Query Frame = 0
Query: 111 YTKCSKCSAAYELDPTVLGNGRRVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRNS 275
Y KC KC A Y ++ VLG GR + CSVCGN WFQ ER TL E+ D+ D+ + N F++F+GN+PFSVS+++L I N K A+V D +G SRGY + + E+ + + AL+ ++GR++ V+ G NS
Sbjct: 145 YVKCGKCQACYPMELDVLGRGRIIECSVCGNRWFQTAERALTLTENFLMKDWTEDR----------------VAATAEAAKNFAGFNLFVGNIPFSVSEKDLGAIFGNFGEVKSTALVTDENGDSRGYGSVKMGTEEDGRKAIKALNGIEIQGRSMLVKVGASNS 293
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A7S3AAQ8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAQ8_9RHOD) HSP 1 Score: 109 bits (272), Expect = 5.710e-25 Identity = 60/173 (34.68%), Postives = 107/173 (61.85%), Query Frame = 0
Query: 105 DPEATYYTKCSKCSAAYELDPTVLG-NGRRVACSVCGNEWFQKPERLFTLRES-EQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRNS 275
DP+ YY++CSKC A YEL P VLG +G +V CSVC N+W+Q+ ++L L + ++ D+P ++ E +++ ++ G N G R P+ + ++ F+GNL F+ +++EL +++ + + VV+ DGRS+G+AF D + E++ + ++ L + GR I + GR +S
Sbjct: 87 DPDVVYYSQCSKCKAVYELRPKVLGLDGSKVQCSVCKNQWYQRRDKLMELDPAVDELEDFPESER-ERFKRSSPSRGGYNGGGR----PSGQFYTAFVGNLSFNTTREELYDLVKDRDVVR--CHVVEKDGRSKGFAFIDFRTKEQLNKAMDELDGYELGGRQIIFKEGRNSS 252
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A8J2SPH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPH7_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.080e-24 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 105 DPEATYYTKCSKCSAAYELDPTVLGNGR--RVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSR-AFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRN 274
D + + C C A Y +D +LG G +V C VCGN WFQ R+ TL + + +Y +K E + ++Q R + A DR P R A ++F+ NLPF S ++ + A + +V+D DGRSRGY F ++ + E+L++ H + V GR + VRPG+++
Sbjct: 95 DEDVQHIITCGSCKAVYAIDKDILGKGAGAKVQCEVCGNVWFQATARVNTLFDGFELKEYDAEKAQEAI--DKQKARAKEAA---DRPPRKRGAATLFVANLPFRYSDDDVVALFAEVAPITSAQVVMDDDGRSRGYGFVEIEVAADAERLISEFHGSDVGGRDLIVRPGKQS 262
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A7S0G725_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G725_9RHOD) HSP 1 Score: 106 bits (265), Expect = 5.820e-24 Identity = 61/173 (35.26%), Postives = 101/173 (58.38%), Query Frame = 0
Query: 105 DPEATYYTKCSKCSAAYELDPTVLG-NGRRVACSVCGNEWFQKPERLFTLRES-EQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRNS 275
DP YY++CSKC A YEL P VLG G +V CSVC N+W+Q+ ++L L + E+ D+P ++++ + + RG GR + ++ F+GNL FS ++ EL +++ + + VV+ DGRS+G+AF D + E++ + ++ L + GR I V+ GR +S
Sbjct: 88 DPNVVYYSQCSKCGAVYELRPKVLGLEGSKVQCSVCKNQWYQRRDKLMELDPAVEELEDFPESEREKFKRSSPH--RGGYNGRH-----GGQFYTAFVGNLSFSTTRDELYDLVKDRDVVR--CHVVEKDGRSKGFAFVDFRTKEQLTKAMDELDGQELGGRQIIVKEGRNSS 251
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A835YSE2_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE2_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.820e-23 Identity = 59/162 (36.42%), Postives = 86/162 (53.09%), Query Frame = 0
Query: 111 YTKCSKCSAAYELDPTVLGN-GRRVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPG 271
Y KC CSA Y +DP +LG GRRV CSVC + WFQ ER+F L D+P +K I +Q G AG ++F+GNLPFS +++LS++ A+ I+ D RS+GY F ++ + + + ++ LH+ + GR I VR G
Sbjct: 5 YIKCGSCSAVYTIDPQMLGERGRRVQCSVCDHSWFQASERVFRLGNGFSMKDFPEEKLAAIKANIEQ---GLTAGGAPKGNGRKGEMTMFVGNLPFSFGEKDLSDLFADHGEVVSAVIIKDNMDRSKGYGFVEMLNKAQGQAAMDTLHNYQINGRPITVRDG 163
BLAST of Gcaud3009.t1 vs. uniprot
Match: R1FCJ1_EMIHU (RRM domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FCJ1_EMIHU) HSP 1 Score: 99.8 bits (247), Expect = 1.440e-21 Identity = 58/161 (36.02%), Postives = 85/161 (52.80%), Query Frame = 0
Query: 114 CSKCSAAYELDPTVLGNG--RRVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGR 272
CS C A+Y ++ LG G +RV CS C +EWFQ RL L E + +YP + KD + AG+ + + AF ++GNLPF V ++EL+++ V ++ D DGRSRG+AF ++ EE V AL+ ++GR I V GR
Sbjct: 51 CSNCKASYSVEEDALGPGAGKRVRCSNCDHEWFQSVARLARLPEDMELVEYPQEMKDRMA-----------AGKPAEARA---AFRAYVGNLPFGVVEEELADLFGEYGNVVHVNVMTDEDGRSRGFAFVNMEIAEEGAAAVEALNGHMLQGRAINVSEGR 197
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A7S3TR26_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TR26_EMIHU) HSP 1 Score: 95.5 bits (236), Expect = 3.240e-20 Identity = 54/166 (32.53%), Postives = 89/166 (53.61%), Query Frame = 0
Query: 111 YTKCSKCSAAYELDPTVLGNGRRVAC--SVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPGRRN 274
+ C++C A +E+D GR+V C + C +EWFQ +RL TL + +YP + KD I G++A +P R F++F+GNL +SV++ +L E+ I + +V I+ D DGR RG+ F ++ + V L ++GR+I V G++N
Sbjct: 36 FVTCARCKATFEVDEADFATGRQVRCGGTGCDHEWFQTADRLQTLPNGMELVEYPQEMKDRIAA-------GKSA------EPVGR-FNIFVGNLAYSVAEDDLREVFEGIGSVAKVIIMTDDDGRPRGFGFVNMEEEAAGARAVKELDGYELQGRSITVSEGKQN 187
BLAST of Gcaud3009.t1 vs. uniprot
Match: A0A7S1TD30_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD30_9RHOD) HSP 1 Score: 95.5 bits (236), Expect = 1.140e-19 Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 0
Query: 109 TYYTKCSKCSAAYELDPTVLGN-GRRVACSVCGNEWFQKPERLFTLRESEQFTDYPMDKKDEILQQNQQNQRGRNAGRRRDRQPNSRAFSVFIGNLPFSVSQQELSEIIANIVTPKRVAIVVDADGRSRGYAFADVNSNEEVEQLVNALHSTSVKGRTIAVRPG 271
T YT+C +C + + + LG+ GR+V C VC + WFQ RL L E E D ++D +++ + R R A F++F+GNLPFSVS+ +L I + +RV I +GRSRG+AF DV S E+++ + + V GR ++VR G
Sbjct: 99 TTYTECVRCGSKFAVSDRELGDKGRKVQCGVCKHVWFQHTNRLSELAEGESLRDMTPAEQDIAIERTKT--RSRRATSDAGASEGGSQFTLFVGNLPFSVSEDDLRVIFSQHCKVQRVHIAT-TEGRSRGFAFVDVASEEDMKLAIEKVSGMDVGGREVSVRQG 259 The following BLAST results are available for this feature:
BLAST of Gcaud3009.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud3009.t1 ID=Gcaud3009.t1|Name=Gcaud3009.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=276bpback to top |