Gcaud178.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud178.t1
Unique NameGcaud178.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length366
Homology
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A2V3IHS7_9FLOR (Pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS7_9FLOR)

HSP 1 Score: 390 bits (1001), Expect = 2.200e-131
Identity = 193/318 (60.69%), Postives = 237/318 (74.53%), Query Frame = 0
Query:   36 QQPPAHSSAHTFQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
            QQ    S   TFQ +A + G R+DKLLA RF  RSRSY+QSLI  GHV IDG SPVSKS RV  G  + V LVPT  + PV AE + L++LYEDEH+ F+NK AGMV HPAPGNW GT+VNALA RY+S+REM   RAGIVHRLDKGTSG+++  KTQ A +KL  LFAAR ++KEYIAITV +   +GC+S  I++P+GR PT+R++M VLP   GGRSAK++VQ +A DA+  LH+ +V IETGRTHQIRVHLRHARAPVLGDELYGA D+N RF    +R +LH+W+L   HP TNE L  ++ LP DM +L+ R
Sbjct:   56 QQNIPQSQVETFQTTAEQTGTRIDKLLACRFKERSRSYIQSLISSGHVQIDGKSPVSKSHRVVPGCEIVVNLVPTEREQPVAAEEIPLEILYEDEHVVFVNKQAGMVVHPAPGNWSGTVVNALAHRYKSLREMNSSRAGIVHRLDKGTSGVLLAGKTQQACEKLSELFAARQLKKEYIAITVGNPAGKGCISRIIDEPVGRCPTDRIRMCVLPEHSGGRSAKSVVQVVASDARSLLHVVKVGIETGRTHQIRVHLRHARAPVLGDELYGAGDINHRFSTLASRPLLHAWKLSLRHPFTNEFLTVTSELPRDMRSLLKR 373          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A1X6NJH3_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJH3_PORUM)

HSP 1 Score: 314 bits (805), Expect = 3.330e-100
Identity = 179/365 (49.04%), Postives = 219/365 (60.00%), Query Frame = 0
Query:   42 SSAHTFQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLID--GLSPVS----KSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREM--------------GC-------------------------------QRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIARRM 355
            S   TF I A EAG R+DK+LA+RF  +SRSY Q+L+ DGHV +   G +P S    K+ ++  G+ V V L PT ++LP+  E + L VLYEDEH+  +NKPAG+V HPAPGNW GTLV+ALA RY+ I EM              GC                               +R G+VHRLDKGTSG+MV A T  AH  L A FAAR V K Y+AIT   A A GC S     PIGRHPT R KM+V+  + GGR A T+V+ +A DA G LH+ARV I TGRTHQIRVH   A+APVLGD LYG+ +VN RF A   R MLH+  L   HP+T ERL   APLP+DM  L+  R+
Sbjct:  123 SEVATFVIDAEEAGQRLDKVLAARFPGQSRSYYQALVADGHVTVTEGGGAPASAAPRKAAKLRAGDAVRVVLAPTAAELPLVPEDIPLDVLYEDEHMVAVNKPAGLVVHPAPGNWTGTLVHALAYRYKGILEMVEQPPXXXXXDGTAGCXXXXXXXXXXVAADDDGSGEWATPHAASLAAKRPGLVHRLDKGTSGVMVAALTPAAHRALVAAFAARRVDKTYVAITAGSAAAVGCASAEFASPIGRHPTERTKMAVVATADGGRPAHTLVENVASDAAGLLHVARVTIATGRTHQIRVHAAAAKAPVLGDGLYGSAEVNRRFHAAAPRPMLHAAALGLDHPVTGERLELHAPLPADMAHLLRSRI 487          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7S3EKN7_9RHOD (Pseudouridine synthase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKN7_9RHOD)

HSP 1 Score: 268 bits (686), Expect = 9.810e-84
Identity = 143/308 (46.43%), Postives = 190/308 (61.69%), Query Frame = 0
Query:   47 FQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARY-ESIREMGCQ--RAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLI 351
            F+IS  EA +R+DK+L +R+   SR+Y   LI    V +DG     K+ ++  G  V V    T     +    + L ++YEDEH+  +NK AGMV HPAPGNW GTLVNALA RY E   E+     R GIVHRLD+GTSG++++A+T  A   L   F  RAV+K Y+A+T  +  + G VS  + QPIGRH T R +M+++    GGR++ T+   IA DA     L  V +ETGRTHQIRVHL+H RAPVLGDE+YG    N R G  V R +LH++RL+  HP+T ERL   A  PSD+  +I
Sbjct:   56 FEISDKEADVRLDKVLTNRYEGFSRNYFGELITSNKVTVDGNVLAKKAAKLKEGSKVEVTFTETNDPSVIVPSDIPLNIIYEDEHILVLNKDAGMVVHPAPGNWDGTLVNALAFRYKEHFLEVHANEMRPGIVHRLDQGTSGVIIVARTPAATRNLQDQFRLRAVKKNYLAVTCRNPFSRGTVSMRVNQPIGRHSTRRTEMAIVSEENGGRASSTVFYHIASDASDMTSLLHVALETGRTHQIRVHLKHLRAPVLGDEVYGYETFNTRVGKHVKRPLLHAFRLEVDHPITGERLLFQAKPPSDVVKVI 363          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT)

HSP 1 Score: 252 bits (644), Expect = 1.600e-78
Identity = 151/310 (48.71%), Postives = 198/310 (63.87%), Query Frame = 0
Query:   46 TFQISAAEAGIRVDKLLASRFSS-RSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESI-REMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
            T  I+  EAG R+DK+LA+RF   RSR+Y QSLIRD +VL++G SP+ K  +   G+ V +  V T  ++ VT E + L VLYEDE +  +NKP+GMV HPAPGNW GT VNAL    + +  +    R GIVHRLDK TSG++V AKT  A  +L  +FA+R V KEY+AI + D   EG     I  PIGRHP  R +M+VL    GGR+A+TI +T+A D  G L L  + + TGRTHQIRVH++H   PVLGD  YG    N +F   V R +LH+ +++FTHP+T   +   A +PSDM T I R
Sbjct:    8 TIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNG-SPIKKQVKPQVGDEVEILFVLT-PEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCKQLPSDSQHLRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDP-GEG----EINLPIGRHPKQRQRMTVL--DSGGRNARTIFRTLASD--GTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK--VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQR 304          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.300e-76
Identity = 143/313 (45.69%), Postives = 189/313 (60.38%), Query Frame = 0
Query:   47 FQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYE------SIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDA-QGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGA-GVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLI 351
            F+   A+AG R+D  L S+   +SR+Y   L   G V ++G S V KS +VT G+ ++VR + T ++L +  E + L V++ED  L  I KP GMV HPAPGNW GT VNAL           S+ E G  R G+VHRLDKGTSG+++ AKT +   +L  LF  R V+K Y+A+     CA       I+ PIGRH TNR KM  +P  Q G  A+  +  +   A  G L +A VRIETGRTHQIRVHL+H R P++GDELYG  D N R    G++R +LH+ RL+FTHP T   L   APLP DM +++
Sbjct:   56 FEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLAT-AELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVSLGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAV-----CAGNPGDDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIV 362          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA)

HSP 1 Score: 248 bits (632), Expect = 1.730e-76
Identity = 148/311 (47.59%), Postives = 199/311 (63.99%), Query Frame = 0
Query:   45 HTFQISAAEAGIRVDKLLASRFSSR-SRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARY-ESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
            +TF +S +EAG R+DKLL+ R+  + SRSY Q LIR+  VL++G  PV K  R   G+ V V    T  ++ +  E++ L+VLYED+HL  INK AGMV HPAPGNW GT VNAL     +S +     R GIVHRLDK TSG +V AK      +L  LF+ R + KEYIA+ V +   +G    T++ PIGRHP +R +M+V+    GGR A T   T+AH  +  L + ++ +ETGRTHQIRVHLRH   P+LGD +YG   +N ++ A  +R MLH++RL+F HP+T E+L   AP+P DM   IAR
Sbjct:   22 NTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNG-RPVKKQVRPESGDEVEVEFALT-PEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEASLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNP-GDG----TVDVPIGRHPVHRKQMAVI--ESGGRHAVTHYSTLAHKDR--LSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSA--SRQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIAR 319          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 244 bits (623), Expect = 4.290e-74
Identity = 142/310 (45.81%), Postives = 193/310 (62.26%), Query Frame = 0
Query:   57 RVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALA----ARYESIREMG---CQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGG----RSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGA--GVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
            R+D  L+  F  +SRSY  SL + G V + G + V KS+++  G+ V+V  +PT +++    E + L +LYEDEHL  + KP GMV HPAPG+W GT  NALA    +R E  R  G     R GIVHRLDKGTSG+++ +K    H KL  +FA+R ++K Y+A+ V +   +      IE  I RHP NR KM V+  +Q G    R+A T+V  ++ D+Q  L LARV+IETGRTHQIRVHL H R PVLGDELYG  D N R     G+ R +LH+++L+  HP+T E L   AP+P DM  ++A+
Sbjct:   79 RLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRA-VKKSEKLRAGQEVSVAFLPT-AEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQD----VKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQ--LSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAK 380          
BLAST of Gcaud178.t1 vs. uniprot
Match: UPI001A920A04 (RluA family pseudouridine synthase n=1 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI001A920A04)

HSP 1 Score: 240 bits (613), Expect = 2.250e-73
Identity = 140/314 (44.59%), Postives = 189/314 (60.19%), Query Frame = 0
Query:   35 LQQPPAHSSAHTFQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQ-GGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDM 347
            L +P A +    F I AA+ G R+D+ LA      SRSYLQ LI  G V + G +    +QRV  GE   + L PT        E + L V++EDEHL  I+KPAG+V HPAPGNW GTL+N L  R    R +   RAGIVHRLDK TSG+MV+A+T++A D+L A+ AAR V ++Y+A+       +G V   ++ PIGR P NRL+M+V+ L +  G+ A T+ + +   A+G   L    +ETGRTHQIRVHL H   P+  D LYG   V     AG+ R  LH++RL F HP+T + L   AP+P+D+
Sbjct:    9 LDEPGAEAETRPFAIEAADHGERLDRALARLVPEFSRSYLQQLIESGAVRLRGATVTKAAQRVKAGEAGDIVLRPTPQSQAFQPEAMPLAVVHEDEHLLVIDKPAGLVVHPAPGNWSGTLLNGLLGRDAQARLL--PRAGIVHRLDKDTSGLMVVARTRMAMDRLVAMIAAREVSRQYLALAHR--AWQGPVQRRVDAPIGRDPRNRLRMAVVDLDRHSGKPAATVFRLLEQGAEGCGVLC--MLETGRTHQIRVHLAHIGHPIASDPLYGGAQV-----AGLARQGLHAFRLAFAHPVTGQSLAFHAPMPADL 311          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT)

HSP 1 Score: 238 bits (607), Expect = 5.160e-73
Identity = 135/300 (45.00%), Postives = 192/300 (64.00%), Query Frame = 0
Query:   53 EAGIRVDKLLASRFSS-RSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYE----SIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDM 347
            EAG R+DK+LA RF   +SR+Y Q LI +GHVL++GLS   K  + T G+ + V  V T  ++ ++ E + L +++EDEH+  INKP GMV HPA GNW GT VNAL    +    S+ E    R GIVHRLDK TSG+++ AKT LAH +L A+F+ R + KEY+A+     C     + TI  PIGRHP +R  MSV+   + G+ A + ++ +  + +  + L RV +ETGRTHQIRVH +H   P+LGD +YG+   N  +G  ++R +LH+ RLQF HP+ N  +  +AP+PSD+
Sbjct:   13 EAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLS-AKKRIKPTAGDEIQVNFVLT-PEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQLGLSLPESSPLRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAV-----CLGNPGNLTISAPIGRHPVHRKLMSVV---ETGKPAISHLKAL--EVKEKISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREYG--IHRQLLHAHRLQFMHPIHNTPVELTAPIPSDL 298          
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A0H5E3K8_9BACT (Pseudouridine synthase n=1 Tax=Estrella lausannensis TaxID=483423 RepID=A0A0H5E3K8_9BACT)

HSP 1 Score: 238 bits (607), Expect = 8.680e-73
Identity = 140/303 (46.20%), Postives = 196/303 (64.69%), Query Frame = 0
Query:   49 ISAAEAGIRVDKLLASRFSS-RSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREMGCQ---RAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDM 347
            I+ +EAG R+DK+LA RF   +SR+Y Q L ++G V ++GL PV K  R   G+ V V+ + T  +L + AE++ L++LYEDE L  I+KP GMV HPAPGNW GT+VNAL      ++E   Q   R GIVHRLDK TSG+++ AK+   H KL  LF++R V KEY+A+     C        I++PIGR P +R +M VL   +GG+ A T  +T+A D Q  + L ++ ++TGRTHQIRVH++   APVLGD LYG+  VN ++ A   R +LH++RL F HP+T + +   APLP D+
Sbjct:   15 IAESEAGERLDKILAGRFKDVKSRTYFQYLFQEGKVSVNGL-PVKKQYRPRTGDLVEVQFILT-PELNLAAENIPLRILYEDESLIAIDKPPGMVVHPAPGNWSGTVVNALLFHCTRLKEEFQQEHIRPGIVHRLDKETSGVLLAAKSHSMHGKLVDLFSSRQVYKEYLAV-----CLGNPGRGIIDKPIGRDPYHRKQMKVL--DEGGKRAVTEFETLATDGQ--VSLVKIILKTGRTHQIRVHMQSKNAPVLGDSLYGSIAVNKKWKA--ERQLLHAYRLSFLHPMTKKPITFQAPLPPDL 304          
The following BLAST results are available for this feature:
BLAST of Gcaud178.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHS7_9FLOR2.200e-13160.69Pseudouridine synthase n=1 Tax=Gracilariopsis chor... [more]
A0A1X6NJH3_PORUM3.330e-10049.04Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A7S3EKN7_9RHOD9.810e-8446.43Pseudouridine synthase n=2 Tax=Rhodosorus marinus ... [more]
A0A7X5TFN1_9BACT1.600e-7848.71Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A836CH15_9STRA1.300e-7645.69Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A212KRQ0_9CHLA1.730e-7647.59Pseudouridine synthase n=1 Tax=Chlamydiales bacter... [more]
A0A7S3XXK7_HETAK4.290e-7445.81Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
UPI001A920A042.250e-7344.59RluA family pseudouridine synthase n=1 Tax=Ramliba... [more]
A0A7W1U2J2_9BACT5.160e-7345.00Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A0H5E3K8_9BACT8.680e-7346.20Pseudouridine synthase n=1 Tax=Estrella lausannens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 56..115
e-value: 9.8E-4
score: 28.4
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 56..136
e-value: 1.67625E-5
score: 40.3106
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 131..292
e-value: 2.8E-29
score: 102.3
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 132..328
e-value: 1.95975E-60
score: 191.012
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 123..356
e-value: 1.3E-66
score: 226.3
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 46..351
NoneNo IPR availablePANTHERPTHR21600:SF57RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Dcoord: 46..351
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePROSITEPS50889S4coord: 56..121
score: 11.624817
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 56..144
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 43..110
e-value: 2.2E-15
score: 57.8
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 53..351
e-value: 1.3E-76
score: 255.7
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 176..190
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 118..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_733_length_18975_cov_3.965368contigNODE_733_length_18975_cov_3.965368:15588..16685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud178.t1Gcaud178.t1Gracilaria caudata M_176_S67 malemRNANODE_733_length_18975_cov_3.965368 15588..16685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud178.t1 ID=Gcaud178.t1|Name=Gcaud178.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=366bp
MRAPRSAFLTATALRAPSLSTQPAHRRLCTAPHALQQPPAHSSAHTFQIS
AAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCG
ETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNW
QGTLVNALAARYESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLG
ALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLS
QGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGD
ELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTL
IARRMGADALADVHH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006145PsdUridine_synth_RsuA/RluA
IPR036986S4_RNA-bd_sf
IPR006225PsdUridine_synth_RluC/D
IPR006224PsdUridine_synth_RluC/D_CS
IPR020103PsdUridine_synth_cat_dom_sf