Gcaud178.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A2V3IHS7_9FLOR (Pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHS7_9FLOR) HSP 1 Score: 390 bits (1001), Expect = 2.200e-131 Identity = 193/318 (60.69%), Postives = 237/318 (74.53%), Query Frame = 0
Query: 36 QQPPAHSSAHTFQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
QQ S TFQ +A + G R+DKLLA RF RSRSY+QSLI GHV IDG SPVSKS RV G + V LVPT + PV AE + L++LYEDEH+ F+NK AGMV HPAPGNW GT+VNALA RY+S+REM RAGIVHRLDKGTSG+++ KTQ A +KL LFAAR ++KEYIAITV + +GC+S I++P+GR PT+R++M VLP GGRSAK++VQ +A DA+ LH+ +V IETGRTHQIRVHLRHARAPVLGDELYGA D+N RF +R +LH+W+L HP TNE L ++ LP DM +L+ R
Sbjct: 56 QQNIPQSQVETFQTTAEQTGTRIDKLLACRFKERSRSYIQSLISSGHVQIDGKSPVSKSHRVVPGCEIVVNLVPTEREQPVAAEEIPLEILYEDEHVVFVNKQAGMVVHPAPGNWSGTVVNALAHRYKSLREMNSSRAGIVHRLDKGTSGVLLAGKTQQACEKLSELFAARQLKKEYIAITVGNPAGKGCISRIIDEPVGRCPTDRIRMCVLPEHSGGRSAKSVVQVVASDARSLLHVVKVGIETGRTHQIRVHLRHARAPVLGDELYGAGDINHRFSTLASRPLLHAWKLSLRHPFTNEFLTVTSELPRDMRSLLKR 373
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A1X6NJH3_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJH3_PORUM) HSP 1 Score: 314 bits (805), Expect = 3.330e-100 Identity = 179/365 (49.04%), Postives = 219/365 (60.00%), Query Frame = 0
Query: 42 SSAHTFQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLID--GLSPVS----KSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREM--------------GC-------------------------------QRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIARRM 355
S TF I A EAG R+DK+LA+RF +SRSY Q+L+ DGHV + G +P S K+ ++ G+ V V L PT ++LP+ E + L VLYEDEH+ +NKPAG+V HPAPGNW GTLV+ALA RY+ I EM GC +R G+VHRLDKGTSG+MV A T AH L A FAAR V K Y+AIT A A GC S PIGRHPT R KM+V+ + GGR A T+V+ +A DA G LH+ARV I TGRTHQIRVH A+APVLGD LYG+ +VN RF A R MLH+ L HP+T ERL APLP+DM L+ R+
Sbjct: 123 SEVATFVIDAEEAGQRLDKVLAARFPGQSRSYYQALVADGHVTVTEGGGAPASAAPRKAAKLRAGDAVRVVLAPTAAELPLVPEDIPLDVLYEDEHMVAVNKPAGLVVHPAPGNWTGTLVHALAYRYKGILEMVEQPPXXXXXDGTAGCXXXXXXXXXXVAADDDGSGEWATPHAASLAAKRPGLVHRLDKGTSGVMVAALTPAAHRALVAAFAARRVDKTYVAITAGSAAAVGCASAEFASPIGRHPTERTKMAVVATADGGRPAHTLVENVASDAAGLLHVARVTIATGRTHQIRVHAAAAKAPVLGDGLYGSAEVNRRFHAAAPRPMLHAAALGLDHPVTGERLELHAPLPADMAHLLRSRI 487
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7S3EKN7_9RHOD (Pseudouridine synthase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKN7_9RHOD) HSP 1 Score: 268 bits (686), Expect = 9.810e-84 Identity = 143/308 (46.43%), Postives = 190/308 (61.69%), Query Frame = 0
Query: 47 FQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARY-ESIREMGCQ--RAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLI 351
F+IS EA +R+DK+L +R+ SR+Y LI V +DG K+ ++ G V V T + + L ++YEDEH+ +NK AGMV HPAPGNW GTLVNALA RY E E+ R GIVHRLD+GTSG++++A+T A L F RAV+K Y+A+T + + G VS + QPIGRH T R +M+++ GGR++ T+ IA DA L V +ETGRTHQIRVHL+H RAPVLGDE+YG N R G V R +LH++RL+ HP+T ERL A PSD+ +I
Sbjct: 56 FEISDKEADVRLDKVLTNRYEGFSRNYFGELITSNKVTVDGNVLAKKAAKLKEGSKVEVTFTETNDPSVIVPSDIPLNIIYEDEHILVLNKDAGMVVHPAPGNWDGTLVNALAFRYKEHFLEVHANEMRPGIVHRLDQGTSGVIIVARTPAATRNLQDQFRLRAVKKNYLAVTCRNPFSRGTVSMRVNQPIGRHSTRRTEMAIVSEENGGRASSTVFYHIASDASDMTSLLHVALETGRTHQIRVHLKHLRAPVLGDEVYGYETFNTRVGKHVKRPLLHAFRLEVDHPITGERLLFQAKPPSDVVKVI 363
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT) HSP 1 Score: 252 bits (644), Expect = 1.600e-78 Identity = 151/310 (48.71%), Postives = 198/310 (63.87%), Query Frame = 0
Query: 46 TFQISAAEAGIRVDKLLASRFSS-RSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESI-REMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
T I+ EAG R+DK+LA+RF RSR+Y QSLIRD +VL++G SP+ K + G+ V + V T ++ VT E + L VLYEDE + +NKP+GMV HPAPGNW GT VNAL + + + R GIVHRLDK TSG++V AKT A +L +FA+R V KEY+AI + D EG I PIGRHP R +M+VL GGR+A+TI +T+A D G L L + + TGRTHQIRVH++H PVLGD YG N +F V R +LH+ +++FTHP+T + A +PSDM T I R
Sbjct: 8 TIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNG-SPIKKQVKPQVGDEVEILFVLT-PEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCKQLPSDSQHLRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDP-GEG----EINLPIGRHPKQRQRMTVL--DSGGRNARTIFRTLASD--GTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK--VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQR 304
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.300e-76 Identity = 143/313 (45.69%), Postives = 189/313 (60.38%), Query Frame = 0
Query: 47 FQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYE------SIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDA-QGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGA-GVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLI 351
F+ A+AG R+D L S+ +SR+Y L G V ++G S V KS +VT G+ ++VR + T ++L + E + L V++ED L I KP GMV HPAPGNW GT VNAL S+ E G R G+VHRLDKGTSG+++ AKT + +L LF R V+K Y+A+ CA I+ PIGRH TNR KM +P Q G A+ + + A G L +A VRIETGRTHQIRVHL+H R P++GDELYG D N R G++R +LH+ RL+FTHP T L APLP DM +++
Sbjct: 56 FEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLAT-AELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVSLGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAV-----CAGNPGDDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIV 362
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA) HSP 1 Score: 248 bits (632), Expect = 1.730e-76 Identity = 148/311 (47.59%), Postives = 199/311 (63.99%), Query Frame = 0
Query: 45 HTFQISAAEAGIRVDKLLASRFSSR-SRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARY-ESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
+TF +S +EAG R+DKLL+ R+ + SRSY Q LIR+ VL++G PV K R G+ V V T ++ + E++ L+VLYED+HL INK AGMV HPAPGNW GT VNAL +S + R GIVHRLDK TSG +V AK +L LF+ R + KEYIA+ V + +G T++ PIGRHP +R +M+V+ GGR A T T+AH + L + ++ +ETGRTHQIRVHLRH P+LGD +YG +N ++ A +R MLH++RL+F HP+T E+L AP+P DM IAR
Sbjct: 22 NTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNG-RPVKKQVRPESGDEVEVEFALT-PEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEASLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNP-GDG----TVDVPIGRHPVHRKQMAVI--ESGGRHAVTHYSTLAHKDR--LSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSA--SRQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIAR 319
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK) HSP 1 Score: 244 bits (623), Expect = 4.290e-74 Identity = 142/310 (45.81%), Postives = 193/310 (62.26%), Query Frame = 0
Query: 57 RVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALA----ARYESIREMG---CQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGG----RSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGA--GVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDMHTLIAR 353
R+D L+ F +SRSY SL + G V + G + V KS+++ G+ V+V +PT +++ E + L +LYEDEHL + KP GMV HPAPG+W GT NALA +R E R G R GIVHRLDKGTSG+++ +K H KL +FA+R ++K Y+A+ V + + IE I RHP NR KM V+ +Q G R+A T+V ++ D+Q L LARV+IETGRTHQIRVHL H R PVLGDELYG D N R G+ R +LH+++L+ HP+T E L AP+P DM ++A+
Sbjct: 79 RLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRA-VKKSEKLRAGQEVSVAFLPT-AEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQD----VKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQ--LSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAK 380
BLAST of Gcaud178.t1 vs. uniprot
Match: UPI001A920A04 (RluA family pseudouridine synthase n=1 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI001A920A04) HSP 1 Score: 240 bits (613), Expect = 2.250e-73 Identity = 140/314 (44.59%), Postives = 189/314 (60.19%), Query Frame = 0
Query: 35 LQQPPAHSSAHTFQISAAEAGIRVDKLLASRFSSRSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQ-GGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDM 347
L +P A + F I AA+ G R+D+ LA SRSYLQ LI G V + G + +QRV GE + L PT E + L V++EDEHL I+KPAG+V HPAPGNW GTL+N L R R + RAGIVHRLDK TSG+MV+A+T++A D+L A+ AAR V ++Y+A+ +G V ++ PIGR P NRL+M+V+ L + G+ A T+ + + A+G L +ETGRTHQIRVHL H P+ D LYG V AG+ R LH++RL F HP+T + L AP+P+D+
Sbjct: 9 LDEPGAEAETRPFAIEAADHGERLDRALARLVPEFSRSYLQQLIESGAVRLRGATVTKAAQRVKAGEAGDIVLRPTPQSQAFQPEAMPLAVVHEDEHLLVIDKPAGLVVHPAPGNWSGTLLNGLLGRDAQARLL--PRAGIVHRLDKDTSGLMVVARTRMAMDRLVAMIAAREVSRQYLALAHR--AWQGPVQRRVDAPIGRDPRNRLRMAVVDLDRHSGKPAATVFRLLEQGAEGCGVLC--MLETGRTHQIRVHLAHIGHPIASDPLYGGAQV-----AGLARQGLHAFRLAFAHPVTGQSLAFHAPMPADL 311
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT) HSP 1 Score: 238 bits (607), Expect = 5.160e-73 Identity = 135/300 (45.00%), Postives = 192/300 (64.00%), Query Frame = 0
Query: 53 EAGIRVDKLLASRFSS-RSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYE----SIREMGCQRAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDM 347
EAG R+DK+LA RF +SR+Y Q LI +GHVL++GLS K + T G+ + V V T ++ ++ E + L +++EDEH+ INKP GMV HPA GNW GT VNAL + S+ E R GIVHRLDK TSG+++ AKT LAH +L A+F+ R + KEY+A+ C + TI PIGRHP +R MSV+ + G+ A + ++ + + + + L RV +ETGRTHQIRVH +H P+LGD +YG+ N +G ++R +LH+ RLQF HP+ N + +AP+PSD+
Sbjct: 13 EAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLS-AKKRIKPTAGDEIQVNFVLT-PEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQLGLSLPESSPLRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAV-----CLGNPGNLTISAPIGRHPVHRKLMSVV---ETGKPAISHLKAL--EVKEKISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREYG--IHRQLLHAHRLQFMHPIHNTPVELTAPIPSDL 298
BLAST of Gcaud178.t1 vs. uniprot
Match: A0A0H5E3K8_9BACT (Pseudouridine synthase n=1 Tax=Estrella lausannensis TaxID=483423 RepID=A0A0H5E3K8_9BACT) HSP 1 Score: 238 bits (607), Expect = 8.680e-73 Identity = 140/303 (46.20%), Postives = 196/303 (64.69%), Query Frame = 0
Query: 49 ISAAEAGIRVDKLLASRFSS-RSRSYLQSLIRDGHVLIDGLSPVSKSQRVTCGETVAVRLVPTYSDLPVTAEHVALQVLYEDEHLAFINKPAGMVTHPAPGNWQGTLVNALAARYESIREMGCQ---RAGIVHRLDKGTSGIMVIAKTQLAHDKLGALFAARAVQKEYIAITVNDACAEGCVSTTIEQPIGRHPTNRLKMSVLPLSQGGRSAKTIVQTIAHDAQGFLHLARVRIETGRTHQIRVHLRHARAPVLGDELYGATDVNARFGAGVNRAMLHSWRLQFTHPLTNERLCKSAPLPSDM 347
I+ +EAG R+DK+LA RF +SR+Y Q L ++G V ++GL PV K R G+ V V+ + T +L + AE++ L++LYEDE L I+KP GMV HPAPGNW GT+VNAL ++E Q R GIVHRLDK TSG+++ AK+ H KL LF++R V KEY+A+ C I++PIGR P +R +M VL +GG+ A T +T+A D Q + L ++ ++TGRTHQIRVH++ APVLGD LYG+ VN ++ A R +LH++RL F HP+T + + APLP D+
Sbjct: 15 IAESEAGERLDKILAGRFKDVKSRTYFQYLFQEGKVSVNGL-PVKKQYRPRTGDLVEVQFILT-PELNLAAENIPLRILYEDESLIAIDKPPGMVVHPAPGNWSGTVVNALLFHCTRLKEEFQQEHIRPGIVHRLDKETSGVLLAAKSHSMHGKLVDLFSSRQVYKEYLAV-----CLGNPGRGIIDKPIGRDPYHRKQMKVL--DEGGKRAVTEFETLATDGQ--VSLVKIILKTGRTHQIRVHMQSKNAPVLGDSLYGSIAVNKKWKA--ERQLLHAYRLSFLHPMTKKPITFQAPLPPDL 304 The following BLAST results are available for this feature:
BLAST of Gcaud178.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud178.t1 ID=Gcaud178.t1|Name=Gcaud178.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=366bpback to top |