Gcaud788.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud788.t1
Unique Name	Gcaud788.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	233

Homology

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A2V3IJ55_9FLOR (Adenosylhomocysteinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ55_9FLOR)

HSP 1 Score: 379 bits (972), Expect = 5.340e-128
Identity = 181/230 (78.70%), Postives = 204/230 (88.70%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLTVPANS 231
            KSKIENIYGIKHSV  GL CALD+M+ GKTVLICGFGDVGMGCA+AMKAAGARC+VAE DPVRAL+A MEG++VTT+E  +SEVDMFITATG+SGVIR+EHMLKMKKN VVGNMGHF+REID+ESLRKYPGT  +EVKPNV RW F+DGH IT+LAEG+LLNLICGTGNPS VMSIAFTLQVLTQ +LW+ RN  ++ PTVCVPPR ID QAALYHLPCI  +LTV  N+
Sbjct:  232 KSKIENIYGIKHSVLNGLLCALDVMLAGKTVLICGFGDVGMGCAMAMKAAGARCLVAETDPVRALMAGMEGYQVTTIETVLSEVDMFITATGDSGVIRMEHMLKMKKNAVVGNMGHFNREIDMESLRKYPGTKAIEVKPNVQRWTFQDGHSITLLAEGRLLNLICGTGNPSLVMSIAFTLQVLTQAHLWKNRNLAQTLPTVCVPPRKIDTQAALYHLPCIGAELTVSTNN 461

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A2V3IY50_9FLOR (Adenosylhomocysteinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY50_9FLOR)

HSP 1 Score: 289 bits (739), Expect = 3.050e-96
Identity = 138/206 (66.99%), Postives = 164/206 (79.61%), Query Frame = 0

Query:   26 MVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLTVPANS 231
            M+ G TVL CGFGDVGMG A+AMK   ARC+  E +PVRAL+A +E ++V TME  + EVD+FITATG   VIRVEHMLK+K N +VGNMGHF+R+IDLES RKYP T  +EVKPN+HRWVF+D H ITILAEG+LLN+ICG  NP  V+SIAF LQVLTQ++LW+ RN  ++ PTVCVPPR ID  AALYHLPCID DLTV  N+
Sbjct:    1 MIAGNTVLFCGFGDVGMGFAIAMKEVKARCLATETEPVRALMAGIEEYQVATMETVLPEVDIFITATGICRVIRVEHMLKIKNNDIVGNMGHFNRKIDLESFRKYPRTKPIEVKPNIHRWVFQDEHSITILAEGRLLNVICGAANPRLVISIAFMLQVLTQVHLWKNRNFAQTLPTVCVPPRTIDTLAALYHLPCIDPDLTVSTNN 206

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A2V3IJJ2_9FLOR (Adenosylhomocysteinase 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJJ2_9FLOR)

HSP 1 Score: 280 bits (716), Expect = 5.020e-93
Identity = 133/193 (68.91%), Postives = 159/193 (82.38%), Query Frame = 0

Query:   26 MVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHL 218
            M+ G TVL CG GDVGMGCA+AM  A ARC+VAE DPV+ L+A +EG++V T+E  + EVD+FITATG+  VIRVEHMLKMK N VVGNMGHF+REIDLESLRKYPG   +EVKP++HRWVF+DGH ITI+AEG+L NLICGT NP  V+ IAFTLQVLTQ++LW+ RNS ++ PTVCV PR I+  AALYHL
Sbjct:    1 MLAGNTVLFCGLGDVGMGCAIAMNTAKARCLVAETDPVQVLMAGIEGYQVATIETVLPEVDIFITATGSCVVIRVEHMLKMKNNAVVGNMGHFNREIDLESLRKYPGIKPIEVKPHIHRWVFQDGHSITIVAEGRLRNLICGTANPRLVIIIAFTLQVLTQVHLWKNRNSAQTLPTVCVSPRTIETLAALYHL 193

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BLAST of Gcaud788.t1 vs. uniprot
Match: R7QHD1_CHOCR (Adenosylhomocysteinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHD1_CHOCR)

HSP 1 Score: 268 bits (686), Expect = 1.500e-84
Identity = 127/225 (56.44%), Postives = 163/225 (72.44%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLT 226
            KSK +N+YG +HS+  G+  A D+M+ GKT++ICG+GDVG G A AMKAAGARC+VAEIDP+ AL A MEGF+V T++  V E+D+ IT TGN G++ V+HM KMK N +VGN+GHFD EID+  L  Y G   +EVKP VHRWVF DGH I +LAEG+LLNL C TG+PSFVMS +FT Q L Q+ LWE R+S K    V + P+ +D + A  HL  ++  LT
Sbjct:  242 KSKFDNVYGCRHSLPDGIMRATDVMLAGKTIMICGYGDVGKGSAQAMKAAGARCLVAEIDPICALQATMEGFQVATLDDYVKEIDIIITTTGNKGIVTVDHMAKMKNNAIVGNIGHFDNEIDIAGLESYKGIKKIEVKPQVHRWVFPDGHGIIMLAEGRLLNLGCATGHPSFVMSCSFTNQTLAQVELWENRSSGKYENNVYILPKVLDEKVARLHLKHLNAKLT 466

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A2V3IRZ2_9FLOR (Adenosylhomocysteinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ2_9FLOR)

HSP 1 Score: 263 bits (672), Expect = 1.880e-82
Identity = 127/225 (56.44%), Postives = 163/225 (72.44%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLT 226
            KSK +N+YG +HS+  G+  A D+M+ GKTV+ICG+GDVG G A AMKAAGARC+VAEIDP+ AL A MEGF+V  +E  +SEVD+ ITATGN  ++ ++HM KMK N +VGN+GHFD EID+  L  Y G   VE+KP VHRW F DGH I +LAEG+LLNL C TG+PSFVMS +FT Q+L Q+ LWE R+S K    V + P+ +D + A  HL  ++  LT
Sbjct:  242 KSKFDNVYGCRHSLPDGIMRATDVMLAGKTVMICGYGDVGKGSAHAMKAAGARCLVAEIDPICALQATMEGFQVARLEDVLSEVDIVITATGNKDIVLLKHMEKMKNNAIVGNIGHFDNEIDIAGLEAYDGIKKVEIKPQVHRWQFPDGHGIIMLAEGRLLNLGCATGHPSFVMSCSFTNQILAQVELWENRSSGKYENNVYILPKVLDEKVARLHLKHLNAKLT 466

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A7S1ERC1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERC1_9RHOD)

HSP 1 Score: 251 bits (641), Expect = 1.990e-80
Identity = 122/234 (52.14%), Postives = 161/234 (68.80%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLT--VPANSSF 233
            KSK +N+YG +HS+  G+  A D+M+ GKTVLICG+GDVG G A +MKAAGARC+V+EIDP+ AL A MEGF+V  +E  + +VD+ IT TGN  ++  + M +MK N +VGN+GHFD EID+  L  YPG   + +KP V R+VF DGH + +LAEG+LLNL C TG+PSFVMS +FT Q L Q+ LWE RNS K    V V P+ +D + A  HL  +   LT   PA + +
Sbjct:   34 KSKFDNVYGCRHSLPDGIMRATDVMLAGKTVLICGYGDVGKGSAQSMKAAGARCMVSEIDPICALQACMEGFQVVPLEDVIDQVDIVITTTGNKDIVMAKDMARMKNNAIVGNIGHFDNEIDMAGLESYPGIKRINIKPQVDRYVFPDGHGVIVLAEGRLLNLGCATGHPSFVMSCSFTNQTLAQVELWENRNSGKYENNVYVLPKVLDEKVARLHLGKLGAKLTELTPAQAEY 267

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A2V3IF33_9FLOR (Adenosylhomocysteinase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF33_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 2.190e-78
Identity = 115/170 (67.65%), Postives = 138/170 (81.18%), Query Frame = 0

Query:   26 MVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNS 195
            M+ G  VL CGF DVGMGCA+AM AA ARC+ AE DPVR L+A +EG++V T+E  + EVD+ ITATG+ GVIRVEHMLKMK N VVGNMGHF+REIDLESLRKYPG   +EVKP +HRWVF+ GH ITILAEG+L N+IC T NP   +SIAFTLQV+T+++LW+ RNS
Sbjct:    1 MLAGNAVLFCGFSDVGMGCAIAMNAAKARCLTAETDPVRGLMAGIEGYQVATIETVLPEVDILITATGSCGVIRVEHMLKMKNNAVVGNMGHFNREIDLESLRKYPGIKNIEVKPYIHRWVFQVGHSITILAEGRLRNVICRTANPRLFLSIAFTLQVMTKVHLWKNRNS 170

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A7S3D6E4_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D6E4_9EUKA)

HSP 1 Score: 246 bits (628), Expect = 2.310e-78
Identity = 121/229 (52.84%), Postives = 156/229 (68.12%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLTVPAN 230
            KSK +N+YG +HS+  G+  A D+M+ GK V+ICGFGDVG GCA AMKAAGAR  V EIDP+ AL A MEG+ V T++    ++D+ ITATGN  ++   HM KMK N +VGN+GHFD EID+  +R   G   VE+KP VHR+VF DGH + +LAEG+LLNL C TG+PSFVMS +FT Q + Q+ LW ER S K    V V P+ +D + A  HL  +   LT  +N
Sbjct:   41 KSKFDNVYGCRHSLPDGIMRATDVMIAGKRVVICGFGDVGKGCAQAMKAAGARVAVTEIDPICALQALMEGYDVVTLDDVCDKIDIVITATGNKDIVMARHMEKMKNNCIVGNIGHFDNEIDVAGVRAIAGIKEVEIKPQVHRFVFPDGHGVILLAEGRLLNLGCATGHPSFVMSSSFTNQTIAQLELWNERTSGKYEKKVYVLPKHLDEKVARLHLDQLGAKLTSLSN 269

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BLAST of Gcaud788.t1 vs. uniprot
Match: A0A7S0L430_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L430_9EUKA)

HSP 1 Score: 243 bits (620), Expect = 1.310e-77
Identity = 116/225 (51.56%), Postives = 158/225 (70.22%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLT 226
            KSK +N+YG +HS+  G+  A D+M+ GK  ++ G+GDVG GCA A+KAAG+R  VAE+DP+ AL A MEGF VTT+   + ++D+ ITATGN G++ VE M KMK N ++GN+GHFD EID+  L K+PG     +KP V R++F DGH + ILAEG+LLNL C TG+PSFVMS +FT QV+ Q+ LW+E++S K    V V P+ +D + A  HL  +   LT
Sbjct:    8 KSKFDNVYGCRHSLPDGIMRATDVMLAGKYAMVVGYGDVGKGCAQALKAAGSRVAVAEVDPICALQAAMEGFEVTTLADVIDKIDIVITATGNKGIVMVEDMAKMKNNAIIGNIGHFDNEIDMAGLEKFPGIKRQNIKPQVDRFIFPDGHGVIILAEGRLLNLGCATGHPSFVMSCSFTNQVVAQMELWKEKDSGKYENKVYVLPKHLDEKVARLHLGKLGAKLT 232

[Close]

BLAST of Gcaud788.t1 vs. uniprot
Match: A0A6T5W2I7_9RHOD (Adenosylhomocysteinase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W2I7_9RHOD)

HSP 1 Score: 248 bits (633), Expect = 1.210e-76
Identity = 121/225 (53.78%), Postives = 157/225 (69.78%), Query Frame = 0

Query:    2 KSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKAAGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRVEHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDGHCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSPTVCVPPRAIDAQAALYHLPCIDVDLT 226
            KSK +N+YG +HS+  G+  A D+M+ GKTVLICG+GDVG G A +MKAAGAR ++AEIDP+ AL A MEG+ VTT+E  + +VD+ IT TGN  ++  + M +MK N +VGN+GHFD EID+  L KY G   + +KP V R+VF DGH I +LAEG+LLNL C TG+PSFVMS +FT Q L Q+ LWE RNS K    V V P+ +D + A  HL  +   LT
Sbjct:  239 KSKFDNVYGCRHSLPDGIMRATDVMLAGKTVLICGYGDVGKGSAQSMKAAGARTLIAEIDPICALQACMEGYEVTTLEDVIEKVDIVITTTGNKDIVMAKDMARMKNNAIVGNIGHFDNEIDMAGLEKYEGIKRINIKPQVDRFVFPDGHGIIVLAEGRLLNLGCATGHPSFVMSCSFTNQTLAQVELWENRNSGKYENNVYVLPKILDEKVARLHLGKLGAKLT 463

The following BLAST results are available for this feature:

BLAST of Gcaud788.t1 vs. uniprot

BLAST of Gcaud788.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IJ55_9FLOR	5.340e-128	78.70	Adenosylhomocysteinase n=1 Tax=Gracilariopsis chor...	[more]
A0A2V3IY50_9FLOR	3.050e-96	66.99	Adenosylhomocysteinase n=1 Tax=Gracilariopsis chor...	[more]
A0A2V3IJJ2_9FLOR	5.020e-93	68.91	Adenosylhomocysteinase 2 n=1 Tax=Gracilariopsis ch...	[more]
R7QHD1_CHOCR	1.500e-84	56.44	Adenosylhomocysteinase n=1 Tax=Chondrus crispus Ta...	[more]
A0A2V3IRZ2_9FLOR	1.880e-82	56.44	Adenosylhomocysteinase n=1 Tax=Gracilariopsis chor...	[more]
A0A7S1ERC1_9RHOD	1.990e-80	52.14	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]
A0A2V3IF33_9FLOR	2.190e-78	67.65	Adenosylhomocysteinase 1 n=1 Tax=Gracilariopsis ch...	[more]
A0A7S3D6E4_9EUKA	2.310e-78	52.84	Hypothetical protein n=1 Tax=Palpitomonas bilix Ta...	[more]
A0A7S0L430_9EUKA	1.310e-77	51.56	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A6T5W2I7_9RHOD	1.210e-76	53.78	Adenosylhomocysteinase n=1 Tax=Erythrolobus austra...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015878	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	SMART	SM00997	AdoHcyase_NAD_2	coord: 7..169 e-value: 2.1E-80 score: 283.1
IPR015878	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	PFAM	PF00670	AdoHcyase_NAD	coord: 7..169 e-value: 3.8E-62 score: 209.2
IPR000043	Adenosylhomocysteinase-like	SMART	SM00996	AdoHcyase_2	coord: 1..233 e-value: 1.2E-13 score: 61.4
IPR000043	Adenosylhomocysteinase-like	PFAM	PF05221	AdoHcyase	coord: 170..226 e-value: 4.5E-11 score: 42.7
IPR000043	Adenosylhomocysteinase-like	PANTHER	PTHR23420	ADENOSYLHOMOCYSTEINASE	coord: 1..226
IPR042172	Adenosylhomocysteinase-like superfamily	GENE3D	3.40.50.1480		coord: 168..223 e-value: 1.0E-7 score: 33.3
None	No IPR available	GENE3D	3.40.50.720		coord: 9..167 e-value: 1.1E-59 score: 202.9
None	No IPR available	PANTHER	PTHR23420:SF0	ADENOSYLHOMOCYSTEINASE	coord: 1..226
None	No IPR available	SUPERFAMILY	52283	Formate/glycerate dehydrogenase catalytic domain-like	coord: 10..226
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 7..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_7185_length_979_cov_9.002252	contig	NODE_7185_length_979_cov_9.002252:2..700 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud788.t1	Gcaud788.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_7185_length_979_cov_9.002252 2..700 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud788.t1 ID=Gcaud788.t1|Name=Gcaud788.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=233bp
MKSKIENIYGIKHSVTKGLFCALDMMVTGKTVLICGFGDVGMGCALAMKA
AGARCIVAEIDPVRALIARMEGFRVTTMEKAVSEVDMFITATGNSGVIRV
EHMLKMKKNTVVGNMGHFDREIDLESLRKYPGTNVVEVKPNVHRWVFRDG
HCITILAEGKLLNLICGTGNPSFVMSIAFTLQVLTQIYLWEERNSTKSSP
TVCVPPRAIDAQAALYHLPCIDVDLTVPANSSF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015878	Ado_hCys_hydrolase_NAD-bd
IPR000043	Adenosylhomocysteinase-like
IPR042172	Adenosylhomocyst_ase-like_sf
IPR036291	NAD(P)-bd_dom_sf