Gcaud8504.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8504.t1
Unique NameGcaud8504.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length416
Homology
BLAST of Gcaud8504.t1 vs. uniprot
Match: A0A2V3J0I7_9FLOR (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0I7_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 2.180e-25
Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 0
Query:  308 DDVGAKAELFLKEWSVKHMNN-------------LMKSLEGEFSEFCQYIIWYATFMATGDFVEQEHRTFHEMLLSSMAIMFAALTLGNISIVAPDVAAAKIGATQIYRLIDRMTLID 412
            D++G    L ++++ +   +N             L   L   FSEFCQ+IIWYATF A GDFVE+ + TF EMLLSSMAI+FAA+TLGN+SI APDVAA+K+GATQIYRLIDR + ID
Sbjct:  912 DNIGTVRSLGIEDYFIGRYDNNINATILAKSRKALFTGLAYGFSEFCQFIIWYATFKAGGDFVEKRYCTFQEMLLSSMAILFAAITLGNVSIFAPDVAASKLGATQIYRLIDRTSQID 1029          
BLAST of Gcaud8504.t1 vs. uniprot
Match: R7Q5S3_CHOCR (Probable ATP-dependent transporter ycf16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5S3_CHOCR)

HSP 1 Score: 102 bits (255), Expect = 9.330e-20
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0
Query:  337 FSEFCQYIIWYATFMATGDFVEQEHRTFHEMLLSSMAIMFAALTLGNISIVAPDVAAAKIGATQIYRLIDRMTLID 412
            FSEFCQY++WYATF A G+FV     +F EMLLSSMAI+FAA+T GN+S+ APDV A++IGAT IYRL+DR + ID
Sbjct:  953 FSEFCQYLLWYATFKAGGNFVRDGRCSFKEMLLSSMAILFAAITFGNVSVFAPDVGASQIGATHIYRLLDRESEID 1028          
BLAST of Gcaud8504.t1 vs. uniprot
Match: A0A2V3IJP7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP7_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 2.140e-14
Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 0
Query:   45 IDVLFTVLHKKHSKVELQGLAGAIGLIKRGNKSHVVSRFMLQAIIHEHKGKDVPQCFNNASLSKAFDAYQEEHRSCEKCPDVFELLEGVLECERPKWKRLLQD--EKIYSSLDDANGEQASESVT--------VPEFSLNEFARLCILLRDDDLSRAAMRNAVGLELTRLPLENGTTRD 213
            ID L+T L +K +K +L  LA  IG+ KRG K+ V++R M++A      G  + +   N+S  +     Q  +   + CPD   LLE   + ER  W   ++    ++  +    + E   E +         VP+F+L+EFARL ++++DD+ ++ A+  AVGL L R  L++   RD
Sbjct:   70 IDALYTYLSRK-TKDQLLSLASPIGVTKRGKKNRVLARLMMKAKAKALLGVSLQELLTNSSSLQDLRELQHSNVILQSCPDDAHLLELFEQRERDLWTSYMEQIRARVCEAQKTLHCEAEPEDLLLLRHKPNGVPKFTLDEFARLVLVIKDDETAQKAIMKAVGLPLDRRELDDRVGRD 247          
BLAST of Gcaud8504.t1 vs. uniprot
Match: A0A2V3IRZ5_9FLOR (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ5_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 1.850e-13
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0
Query:  322 SVKHMNNLMKSLEGEFSEFCQYIIWYATFMATGDFVEQEHRTFHEMLLSSMAIMFAALTLGNISIVAPDVAAAKIGATQIYRLIDRMTLID 412
            + K   +++  +   F+EFC+ +IWYAT+ A G FVE+ +  + EM  S++A+MF+A  LG  S   PD+ AAK+GAT I+RLIDR + ID
Sbjct:  950 AAKRTKSIVTGVAYGFAEFCKAMIWYATYKAGGKFVEKGYCEYDEMFTSTLALMFSAAMLGGASAFVPDLVAAKLGATHIFRLIDRQSQID 1040          
BLAST of Gcaud8504.t1 vs. uniprot
Match: A0A2V3IFS9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS9_9FLOR)

HSP 1 Score: 62.4 bits (150), Expect = 1.020e-7
Identity = 41/141 (29.08%), Postives = 68/141 (48.23%), Query Frame = 0
Query:   94 GKDVPQCFNNASLSKAFDAYQEEHRSCEKCPDVFELLEGVLECERPKWKRLLQD--EKIYSSLDDANGEQASESVT--------VPEFSLNEFARLCILLRDDDLSRAAMRNAVGLELTRLPLENGTTRDSFWGTVEKRFN 224
            G  + +   N+S  +     Q  +   + CPD   LLE   + ER  W   ++    ++  +    + E   E +         VP+F+L+EFARL ++++DD+ +R A+  AVGL L R  L++   RD  +  V  RFN
Sbjct:   10 GVSLQELLTNSSFVQDLRKLQHSNVILQSCPDDAHLLELFEQRERDLWTSYMEQIRARVCEAQKTLHCEAEPEDLLLLRHKPNGVPKFTLDEFARLALVIKDDETARKAIMKAVGLPLDRQELDDRVGRDEDFSVVADRFN 150          
BLAST of Gcaud8504.t1 vs. uniprot
Match: UPI001E1E0B96 (ABC transporter B family member 21-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0B96)

HSP 1 Score: 60.5 bits (145), Expect = 4.060e-6
Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:  338 SEFCQYIIWYATFMATGDFVEQEHRTFHEMLLSSMAIMFAALTLGNISIVAPDVAAAKIGATQIYRLIDRMTLID 412
            +EF  Y ++  +F     F+E    TF  ++ +   ++FAAL+LGN+S+  PD+AAA + AT I+RL+DR + ID
Sbjct:  616 AEFSLYAMYAISFWFGAKFIENGQCTFLGLMKAVTGLLFAALSLGNVSLFTPDIAAANVAATSIFRLLDRESAID 690          
BLAST of Gcaud8504.t1 vs. uniprot
Match: A0A0L0G7S5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G7S5_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 5.810e-6
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  337 FSEFCQYIIWYATFMATGDFVEQEHRTFHEMLLSSMAIMFAALTLGNISIVAPDVAAAKIGATQIYRLIDRMTLID 412
            FSEF  + IW  +F      V+     F EML +   I+F A+TLG +S + PD   AKI A++++RLIDR+  +D
Sbjct:  986 FSEFFMFAIWAVSFYYGSTLVDDGKCDFQEMLTAINGIIFGAMTLGQVSAMMPDAGKAKISASKVFRLIDRVPEVD 1061          
The following BLAST results are available for this feature:
BLAST of Gcaud8504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J0I7_9FLOR2.180e-2555.08Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
R7Q5S3_CHOCR9.330e-2065.79Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
A0A2V3IJP7_9FLOR2.140e-1431.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRZ5_9FLOR1.850e-1345.05Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
A0A2V3IFS9_9FLOR1.020e-729.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001E1E0B964.060e-640.00ABC transporter B family member 21-like n=1 Tax=Me... [more]
A0A0L0G7S5_9EUKA5.810e-640.79Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10ABC transporter type 1, transmembrane domaincoord: 313..414
e-value: 3.4E-9
score: 37.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_679_length_19824_cov_4.222318contigNODE_679_length_19824_cov_4.222318:573..3779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8504.t1Gcaud8504.t1Gracilaria caudata M_176_S67 malemRNANODE_679_length_19824_cov_4.222318 573..3779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8504.t1 ID=Gcaud8504.t1|Name=Gcaud8504.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=416bp
MRSLRPTNQNNANFLVAEPTAQHNEPSASAISTKCPEPNEHNRRIDVLFT
VLHKKHSKVELQGLAGAIGLIKRGNKSHVVSRFMLQAIIHEHKGKDVPQC
FNNASLSKAFDAYQEEHRSCEKCPDVFELLEGVLECERPKWKRLLQDEKI
YSSLDDANGEQASESVTVPEFSLNEFARLCILLRDDDLSRAAMRNAVGLE
LTRLPLENGTTRDSFWGTVEKRFNNTAEKESSLDGPLRKKKRGSDDSASM
LKDCLSQASKTSVCNTEAFNKNLQTVENDERDARVHRTLELLRAELRNRR
LDNAFEEDDVGAKAELFLKEWSVKHMNNLMKSLEGEFSEFCQYIIWYATF
MATGDFVEQEHRTFHEMLLSSMAIMFAALTLGNISIVAPDVAAAKIGATQ
IYRLIDRMTLIDLAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf