Gcaud1695.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1695.t1
Unique Name	Gcaud1695.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	182

Homology

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BLAST of Gcaud1695.t1 vs. uniprot
Match: A0A2V3IKB4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKB4_9FLOR)

HSP 1 Score: 85.1 bits (209), Expect = 3.110e-17
Identity = 61/180 (33.89%), Postives = 103/180 (57.22%), Query Frame = 0

Query:    1 MEAYQIVASIEADVIAMNKVLKSVEPIRPYMTLEESIEIEKDAELMVDLVLESGRLASMGSENAVEVYKASREVAMLKSEAVVAEGEAQKAQKQLAARQKEADDNGKRCSECSALKVEVEKLRKARGEAARKXXXXXXXXXXXXXXXXXXXAAVEDTRDKAKEAKGRLASAVDRIKKRAG 180
            MEAY++VA+IE+D IA+N  LKS+E     ++ EE  ++EKDA ++++L+LESGR A   S  A  VYK SR+V+ L++ A+ +     +A ++L   Q++AD     C+ C+ L+ +V++ +K   +A++                      +E+ R  + EAK R+ + V  + KRAG
Sbjct:   26 MEAYKMVAAIESDGIAVNDALKSIEHQWNVVSPEEREQLEKDAVMVMELLLESGRGAFDVSVMANTVYKGSRQVSQLRAAAIQSHERLNQATQKLEEEQEKADGKNSPCTACAQLQGDVKEFKKEVKDASKLAGEAARGNREHNHKAIEDMKKIEEQRSMSAEAKERVLAKVSSVLKRAG 205

[Close]

BLAST of Gcaud1695.t1 vs. uniprot
Match: A0A2V3II86_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II86_9FLOR)

HSP 1 Score: 53.1 bits (126), Expect = 5.130e-6
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0

Query:    1 MEAYQIVASIEADVIAMNKVLKSVEPIRPYMTLEESIEIEKDAELMVDLVLESGRLASMGSENAVEVYKASREVAMLKSEA 81
            +E Y+I A IE DVI  N  +KS++ +R  M+ +E   IEKD  L++D V ESG LA +  ++   VY+ SR +  L ++A
Sbjct:   26 LEVYEIPA-IELDVIVTNDDIKSMDQMRNKMSAQEIENIEKDGNLIIDAVTESGCLALVAIQDGKRVYRGSRNLTRLAAKA 105

The following BLAST results are available for this feature:

BLAST of Gcaud1695.t1 vs. uniprot

BLAST of Gcaud1695.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IKB4_9FLOR	3.110e-17	33.89	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3II86_9FLOR	5.130e-6	40.74	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 144..174
None	No IPR available	COILS	Coil	Coil	coord: 74..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_676_length_19860_cov_4.402802	contig	NODE_676_length_19860_cov_4.402802:16191..16736 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1695.t1	Gcaud1695.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_676_length_19860_cov_4.402802 16191..16736 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1695.t1 ID=Gcaud1695.t1|Name=Gcaud1695.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=182bp
MEAYQIVASIEADVIAMNKVLKSVEPIRPYMTLEESIEIEKDAELMVDLV
LESGRLASMGSENAVEVYKASREVAMLKSEAVVAEGEAQKAQKQLAARQK
EADDNGKRCSECSALKVEVEKLRKARGEAARKAGEAAKNSREKRRKAAKQ
RAAVEDTRDKAKEAKGRLASAVDRIKKRAGA*