Gcaud7997.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7997.t1
Unique NameGcaud7997.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length463
Homology
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A2V3IDR2_9FLOR (Putative ADP-ribosylation factor GTPase-activating protein AGD6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR2_9FLOR)

HSP 1 Score: 521 bits (1343), Expect = 1.120e-180
Identity = 336/466 (72.10%), Postives = 361/466 (77.47%), Query Frame = 0
Query:    1 MDPTKKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAPPPANRPAPKMAVPGSLGSTGVGGVTTHSSSGGRRTSGLGMGSIGNNGGMGXXXNNXXXXXXXXXXXXXXXXXXXXXXXXXTSGRGTGXXXXXXXXXXXXXXXXXXXXXGAPRMGGISSDMWHQQNGNPSAMSS----TSXXXXXXXXXXXXXXXXXXXSALGSNAPATLNNVGQNLTRNLSNIATTVQKSDVIGHASKAAAQAGGMLSSWFTNVSSQANKMMNENDGRHELRAGLRRNLAQAPGASSAGFRGFSSDDFAKSSYGTNINDTNETTPTNRTNGVSYTQMSSSYQASQPAATQSXXXXXXXXXXXXXXSAGESAWGGFDDVPSTPKETNDPWGAWN 462
            MDPTKKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWK+WEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQS+AAA+YAARLKSEATGEPYQAPPPANRP PKM  PGSLGSTGVGGVTTH++S G+                      XXXXXXXXXXXXXXXXXXXX     +   G G XXXXXXXXXXXXXXXX    GA RMGGISS+MWHQ NGNP +M S     S                    A+G+ AP +L+NVGQNLTRNLSNIA+ VQ SD+IG ASKAAAQAGGMLSSWFTNVS+QANKMMNENDGR ELRAGLRRNLAQ PGASSAGFRGFSS+DFAK+SYGTN N TN+T PT+ T+  SYTQMS+SYQ +QPAA++      XXXXXXXXX                PKETNDPWGAWN
Sbjct:    1 MDPTKKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKDWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSDAAAIYAARLKSEATGEPYQAPPPANRPKPKMTAPGSLGSTGVGGVTTHNTSSGQPMXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXMGNTTSMAGGMGNXXXXXXXXXXXXXXXXSYGSGAQRMGGISSEMWHQSNGNPPSMQSGMQGISSDSYGGRQSSPGFKGFGNLGAIGAAAPKSLSNVGQNLTRNLSNIASQVQTSDMIGQASKAAAQAGGMLSSWFTNVSTQANKMMNENDGREELRAGLRRNLAQVPGASSAGFRGFSSEDFAKNSYGTNSN-TNQTQPTDHTSTASYTQMSTSYQTAQPAASKPTPAQTXXXXXXXXXXXXXXXXXXXXXXXXXPKETNDPWGAWN 454          
BLAST of Gcaud7997.t1 vs. uniprot
Match: R7Q2S3_CHOCR (Arf-GAP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2S3_CHOCR)

HSP 1 Score: 402 bits (1032), Expect = 2.930e-134
Identity = 262/474 (55.27%), Postives = 302/474 (63.71%), Query Frame = 0
Query:    1 MDPTKKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAPPPANRPAPKMAVPGSLGSTGVGGVTTHSSSGGRRTSGLGMGSIGNNGGMGXXXNNXXXXXXXXXXXXXXXXXXXXXXXXXTSGRGTGXXXXXXXXXXXXXXXXXXXXXGAPRMGGISSDMWHQQNGNPSAMSSTSXXXXXXXXXXXXXXXXXXX------------SALGSNAPATLNNVGQNLTRNLSNIATTVQKSDVIGHASKAAAQAGGMLSSWFTNVSSQANKMMNENDGRHELRAGLRRNLAQAPGASSAGFRGFSSDDFAKSSYGTNINDTNETTPTNRTNGVSYTQMSSSYQASQPAATQSXXXXXXXXXXXXXXSAGESAWGGFDDVPSTPKETNDPWGAWN 462
            MDPTK++LRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMD+WKEWEVKRMQ GGNAKFV YCK NGM+GA+I+SKYQSEAAA+YAA LK+ ATGEPY  P PANRP P+ A    +G+TG+GG+TTHS+  G       MG  GN+GG                                                            G  R GGISSDMW Q NGN    S   XXXXXXXXXXXXXXXXXXX            +A  +N  + LNNVG+++TRNLS+IA+ VQ SDV+G A KAAAQAGGMLSSWFTNVS+QA KMMN++DGR+ELR  LR+NLA  PGA+SAGFRGFSSDD+ KS YG+N N T+     +  N +  +  S+ Y  S    T +              S G   WGGFDDV + P    D WGAW+
Sbjct:    1 MDPTKQVLRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDRWKEWEVKRMQAGGNAKFVTYCKSNGMHGADIASKYQSEAAAIYAATLKAVATGEPYVPPAPANRPKPRPAASRGMGTTGMGGMTTHSAPAGGIND---MGERGNSGG----------------------------------------------------------GFGGARTGGISSDMWAQSNGNGGMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSNANLNNVTSNLNNVGKSVTRNLSSIASQVQTSDVVGQAGKAAAQAGGMLSSWFTNVSTQATKMMNDDDGRNELRQNLRQNLA--PGAASAGFRGFSSDDYQKS-YGSNGNQTSMGGSRSAENSMP-SMSSADYARSNN--TSNVPSVAPVHASNPVTSTGNDGWGGFDDVAAEPHGKKDAWGAWD 407          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A7S1ET80_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET80_9RHOD)

HSP 1 Score: 180 bits (456), Expect = 3.050e-51
Identity = 86/136 (63.24%), Postives = 99/136 (72.79%), Query Frame = 0
Query:    7 ILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAPPPANRPAPKMAVPGSLGST 142
            +LRELQ +PENK C DC  KNPQWATV++GTFICLDCSG+HRGLGVHISFVRSVGMDKWK+WEVKRMQ GGN  F  YC  N +       KY S  AAVYAA+L+++ATGEPY  P   N    + A   S G+T
Sbjct:    9 VLRELQAKPENKTCVDCQQKNPQWATVNYGTFICLDCSGRHRGLGVHISFVRSVGMDKWKDWEVKRMQLGGNDAFRTYCIANNIQNLPTEQKYNSHEAAVYAAKLRAKATGEPYVEPKRINAAPSQAAQSTSFGNT 144          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A7S0ZIR6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIR6_9RHOD)

HSP 1 Score: 177 bits (449), Expect = 1.020e-50
Identity = 81/117 (69.23%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    7 ILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAP 123
            +LRELQ +PENK C DC  KNPQWATV++GTFICLDCSG+HRGLGVHISFVRSVGMDKWK+WEVKRMQ GGN  F  YC  N +       KY S  AAVYAA+L+++ATGEPY  P
Sbjct:    9 VLRELQAKPENKTCVDCQQKNPQWATVNYGTFICLDCSGRHRGLGVHISFVRSVGMDKWKDWEVKRMQLGGNDAFRTYCIANNIQNLPTEQKYNSHEAAVYAAKLRAKATGEPYLEP 125          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A7S1TJD8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJD8_9RHOD)

HSP 1 Score: 176 bits (447), Expect = 4.560e-47
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 0
Query:    5 KKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAP 123
            K  LR+LQ R EN+ C DCG  NPQWATVSFGTFICL+CSG+HR LG HISFVRSVGMDKWKEWEV+RM  GGN KF  Y K+ G++G  I  KY ++ +AVY+A+LKSEATGEPY AP
Sbjct:    7 KGTLRDLQGRQENRKCVDCGAANPQWATVSFGTFICLECSGRHRALGTHISFVRSVGMDKWKEWEVQRMLHGGNDKFSAYAKQTGIHGRPIQDKYNTKESAVYSAKLKSEATGEPYVAP 125          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A5J4YQT1_PORPP (Putative ADP-ribosylation factor GTPase-activating protein AGD6 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQT1_PORPP)

HSP 1 Score: 177 bits (450), Expect = 6.090e-47
Identity = 83/117 (70.94%), Postives = 96/117 (82.05%), Query Frame = 0
Query:    8 LRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAPP 124
            L+ LQ R ENKVC DC TKNPQWATV+FGTF+CLDCSGQHRGLG HISFVRSVGMDKWK+ EV+RM+ GGN  F  Y +ENG+   +I  KY ++AAAVYAA+LKS+ATGEPY  PP
Sbjct:   10 LKALQARDENKVCVDCATKNPQWATVNFGTFMCLDCSGQHRGLGTHISFVRSVGMDKWKDLEVERMKAGGNDAFRAYARENGIDQMDIKQKYNTKAAAVYAAKLKSKATGEPYVEPP 126          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A1X6PIT7_PORUM (Arf-GAP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIT7_PORUM)

HSP 1 Score: 172 bits (436), Expect = 1.740e-43
Identity = 81/119 (68.07%), Postives = 91/119 (76.47%), Query Frame = 0
Query:    5 KKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAP 123
            K +LR LQ  PENKVC DCG KNPQWATVSFGTF+CLDCSG HR LGV ISFVRSVGMDKWK WE KRMQ GGNA F  Y    G+    I  KY ++AAA+Y+A+LK++ATG PY AP
Sbjct:   14 KALLRRLQAEPENKVCVDCGAKNPQWATVSFGTFMCLDCSGVHRSLGVAISFVRSVGMDKWKAWEAKRMQLGGNAAFRAYAAAEGIATLPIDRKYNTDAAAIYSAKLKAKATGTPYVAP 132          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A7J7IJ61_9RHOD (Arf-GAP domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJ61_9RHOD)

HSP 1 Score: 157 bits (397), Expect = 6.020e-40
Identity = 74/139 (53.24%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    7 ILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYG----AEISSKYQSEAAAVYAARLKSEATGEPYQAPPPANRPAPKMAVPGSLGS 141
            +L ELQ  P+N+ CADCG  +PQWATV++GTFICL+CSG+HRGLGVH+SFVRSV MD+WK+WE++ MQ GGNA FV++ +           +I++KY S AA VYA R+++ A GEP+Q P P++ P+ +M +  S G+
Sbjct:   22 VLSELQRLPDNQRCADCGAHHPQWATVTYGTFICLECSGRHRGLGVHVSFVRSVSMDRWKDWELRHMQVGGNAAFVEFMRRFAGISPGGPVDIAAKYSSPAANVYAQRIRALARGEPWQDPAPSSMPSLQMQLQRSDGN 160          
BLAST of Gcaud7997.t1 vs. uniprot
Match: A0A7S3FIN7_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FIN7_9VIRI)

HSP 1 Score: 147 bits (372), Expect = 3.820e-39
Identity = 68/119 (57.14%), Postives = 88/119 (73.95%), Query Frame = 0
Query:    8 LRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGM-YGAEISSKYQSEAAAVYAARLKSEATGEPYQAPPP 125
            LRELQ RPENK+C DC T+NPQWA+VS+G F CL+CSG HRGLGVHISFVRSVGMD W + ++K+MQ GGNA  +++ K  G+  G +I  KY S+AA VY  ++ + A G+ +  P P
Sbjct:   17 LRELQARPENKICCDCSTRNPQWASVSYGCFFCLECSGVHRGLGVHISFVRSVGMDAWNDVQLKKMQAGGNAALIEHFKAYGIDKGVDIKRKYHSKAAEVYRRKIDAAAKGQKFAMPAP 135          
BLAST of Gcaud7997.t1 vs. uniprot
Match: M1VD52_CYAM1 (Similar to ADP ribosylation factor 1 GTPase activating protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VD52_CYAM1)

HSP 1 Score: 151 bits (382), Expect = 8.290e-38
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 0
Query:    6 KILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGLGVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKE----NGMYGAEISSKYQSEAAAVYAARLKSEATGEPYQAPPPANRP 129
            K+L ELQ  P+NK CADCG  +PQWATV++GTFICL+CSG+HRGLGVH+SFVRSV MD+WK  E+++MQ GGNA F+ + +          A+I +KY + AAA+YA R+++ A GEP+Q P P   P
Sbjct:   14 KVLAELQRLPDNKRCADCGAYHPQWATVTYGTFICLECSGRHRGLGVHVSFVRSVSMDRWKPLELRQMQVGGNAAFIDFMRRFAGITPSVSADIPAKYATPAAAIYAQRIRALARGEPWQDPEPGRVP 141          
The following BLAST results are available for this feature:
BLAST of Gcaud7997.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDR2_9FLOR1.120e-18072.10Putative ADP-ribosylation factor GTPase-activating... [more]
R7Q2S3_CHOCR2.930e-13455.27Arf-GAP domain-containing protein n=1 Tax=Chondrus... [more]
A0A7S1ET80_9RHOD3.050e-5163.24Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S0ZIR6_9RHOD1.020e-5069.23Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1TJD8_9RHOD4.560e-4768.91Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YQT1_PORPP6.090e-4770.94Putative ADP-ribosylation factor GTPase-activating... [more]
A0A1X6PIT7_PORUM1.740e-4368.07Arf-GAP domain-containing protein n=1 Tax=Porphyra... [more]
A0A7J7IJ61_9RHOD6.020e-4053.24Arf-GAP domain-containing protein n=1 Tax=Cyanidio... [more]
A0A7S3FIN7_9VIRI3.820e-3957.14Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
M1VD52_CYAM18.290e-3855.47Similar to ADP ribosylation factor 1 GTPase activa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 36..53
score: 59.39
coord: 57..78
score: 40.91
coord: 17..36
score: 48.97
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 5..120
e-value: 1.8E-36
score: 137.2
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 6..101
e-value: 2.7E-32
score: 111.3
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 5..120
score: 24.6814
IPR038508ArfGAP domain superfamilyGENE3D1.10.220.150Arf GTPase activating proteincoord: 1..123
e-value: 2.2E-44
score: 152.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..462
NoneNo IPR availablePANTHERPTHR45686ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATEDcoord: 4..425
NoneNo IPR availablePANTHERPTHR45686:SF16ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN GCS1coord: 4..425
NoneNo IPR availableCDDcd08830ArfGap_ArfGap1coord: 4..117
e-value: 2.22953E-68
score: 211.587
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 4..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_675_length_19862_cov_4.263113contigNODE_675_length_19862_cov_4.263113:17135..18523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7997.t1Gcaud7997.t1Gracilaria caudata M_176_S67 malemRNANODE_675_length_19862_cov_4.263113 17135..18523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7997.t1 ID=Gcaud7997.t1|Name=Gcaud7997.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=463bp
MDPTKKILRELQMRPENKVCADCGTKNPQWATVSFGTFICLDCSGQHRGL
GVHISFVRSVGMDKWKEWEVKRMQCGGNAKFVKYCKENGMYGAEISSKYQ
SEAAAVYAARLKSEATGEPYQAPPPANRPAPKMAVPGSLGSTGVGGVTTH
SSSGGRRTSGLGMGSIGNNGGMGGMGNNMGGIGNNMNGMGNNMGGMASNM
SSMTSGRGTGMGTGMGTGMGTGTSMGSGYGSGAPRMGGISSDMWHQQNGN
PSAMSSTSSAGYGGGSGNPGFGGFGGFSALGSNAPATLNNVGQNLTRNLS
NIATTVQKSDVIGHASKAAAQAGGMLSSWFTNVSSQANKMMNENDGRHEL
RAGLRRNLAQAPGASSAGFRGFSSDDFAKSSYGTNINDTNETTPTNRTNG
VSYTQMSSSYQASQPAATQSSNPPPKTAVAAGGGSAGESAWGGFDDVPST
PKETNDPWGAWN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO