Gcaud3147.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3147.t1
Unique NameGcaud3147.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length258
Homology
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A225VRW8_9STRA (ATP-dependent DNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VRW8_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.460e-19
Identity = 65/224 (29.02%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   40 KSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTGELSGVQFPSNTTFHDANIFNVDCIIASNFSVVAFIRSKEIMKALPRPFSNIPSRYKDVFPVFPYCQDGVY-VKLKKSENVKVQ---------VSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTF-EYFKPTDVLLTEHERLIEIE 252
            KS+ T+ D +T G+ I+L +    PV+ ++N++  + +ANG+ G ++G   P++T    +   +V       ++ V   +S E++    R + ++          FP+  +GV  V+L+  ++VKVQ         + Q+P +PAYS TT K QG T+E ++  P     R  P R+S YV  +RV++++ L+L + +S      YF P    + E  RL  +E
Sbjct:  294 KSLKTIRDDKTAGMAIMLEIGLGAPVQCTKNTSRSLKLANGSIGFVTGFV-PASTDKPVSTTHSV-------YTEVTHSKSPEVVFIKLRDYEDVQ--------FFPFLPNGVVPVRLRYEKSVKVQLPNRSFSINIIQVPVIPAYSITTEKCQGMTLEKIVLAPLRHATRRSPQRSSFYVAATRVKSLRQLYLMEKLSLEELTSYFTPNPAAMAETRRLEALE 501          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A0W8DR42_PHYNI (ATP-dependent DNA helicase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DR42_PHYNI)

HSP 1 Score: 89.4 bits (220), Expect = 9.830e-17
Identity = 66/214 (30.84%), Postives = 106/214 (49.53%), Query Frame = 0
Query:   40 KSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTGELSGVQFPSNTTFHDANIFN-VDCIIASNFSVVAFIRSKEIMKALPRPFSNIPSRYKDVFPVFPYCQDGVYVKLKKSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERLIEIE 252
            KS+ ++ D +  G+ I L +     V+ ++N +    +ANG+ G +  +  PS        I N ++    S    V F++ K+   A     S +P    DV PV    + GV ++L    +  + + Q+  V AYS TT K QG TVE +I  P     R +P R+S YV ++RV+ +  L+L  P+++   EYF P+   L E +RL  IE
Sbjct:  247 KSLGSIRDDKISGMPINLEIALGSTVQCTKNVSTTFKLANGSIGTVVAIT-PSQDDVVQVRIANGIEEHYHSLPPDVVFVKLKDY--ASQSFVSTLPL---DVVPVCKRTECGVRIRLP-DRSFSISICQVSLVLAYSLTTEKCQGLTVEKMILAPLRHPTRRIPQRSSFYVAVTRVKTLSQLYLMAPLTKEFLEYFTPSRDALAETQRLHAIE 453          
BLAST of Gcaud3147.t1 vs. uniprot
Match: W2Y8N0_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2Y8N0_PHYPR)

HSP 1 Score: 87.8 bits (216), Expect = 1.130e-16
Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 0
Query:   66 RVSQNSAVGIGIANGTTGELSGVQFPSNTTFHDA-NIFNVDCIIASNFSVVAFIRSKEIMKALPRPFSNIPSRYKDVFPVFPYCQDGVYVKLKKSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERLIEIE 252
            R+ QN +    +ANGT G +  ++ PS+T       +      + S    + F++ ++    L   F  +P     V P+ P+ Q+ + ++L    +  V ++Q+P VPA+S T+ K QG TVE +I  P     R  P R+  YV ++RV  M +L LT+ ++     YF P    L E ERL+ +E
Sbjct:  130 RMQQNVSTVFKLANGTIGYVVSIK-PSSTDIEQVIQVGGFVTRVHSEPPEIIFVQLRDHNNPL---FEGLPD---GVVPLRPWKQNSIQIQLP-DRSFSVNITQIPLVPAFSLTSEKCQGLTVERMILAPLRHSTRKSPQRSYFYVAVTRVTTMSELILTEELTLEYLSYFIPDPEALAETERLLRLE 309          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A815UF33_9BILA (ATP-dependent DNA helicase n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815UF33_9BILA)

HSP 1 Score: 89.0 bits (219), Expect = 1.860e-16
Identity = 80/267 (29.96%), Postives = 124/267 (46.44%), Query Frame = 0
Query:   16 GIKPIVSVARVTANDGMVISEDLLKSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTG--------------ELSGVQFPSNTTFHDANIFNVDCIIASNFSVVAFIRSK-----EIMKALPRPFSNIPSRYK-DVFPVFPYCQDGVYVKLKKSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSR----ASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERLIEI--ETQHS 256
            G  PIV VA+ T     +    L+K +  L D +T  L  LLPL P MPV ++QN A+ +G+ NG  G              E+    FPSNT +          I   ++++V  ++SK     E ++    P   +   ++ D+  V P  +     K  +   + ++   LP VPAYS TT+K QG+T+ N++          LP+     A++YV LSRV+ + DL + +          KP+   L E ERL ++  ETQ S
Sbjct:  420 GQAPIVCVAQDTCKGKSIEDPTLVKKLLELSDSKTEHLPGLLPLVPGMPVILTQNVAIELGLINGMNGIFRQLVYEKDFVSTEILSETFPSNTQY----------IRKPSYALVEIVKSKIECNLEQLQTNLVPIPLMEQTFRIDIGDVLPKDKKP---KSNRKAILSIKRRALPLVPAYSITTHKSQGQTLNNVVID------LKLPNENDDIAAIYVPLSRVKRLTDLVILRHFDYKVL-LIKPSKSQLAEIERLDKLYSETQKS 666          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A817VUV2_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A817VUV2_9BILA)

HSP 1 Score: 85.9 bits (211), Expect = 2.580e-16
Identity = 72/243 (29.63%), Postives = 117/243 (48.15%), Query Frame = 0
Query:   16 GIKPIVSVARVTANDGMVISEDLLKSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTGELSGVQFPSN---TTFHDANI-FNVDCIIASNFSVVAFIRSKEIMKALPRPFSNIP---SRYKDVFPVFPYCQDGVY--VKLKKSEN-VKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERL 248
            G+ PIV VA+ T     +    L K++    D +T  L   LPL   MPV +++N A  +G++NGT G    + +  +   T F D N   N   I+   +++V F   K            +P   S     F V  +  + V    K+ K+   + V+   LP +PAYS TT+K QG+T++ +I    +    G    AS+YV LSR++ ++DL + +P   +T +  KP+   + E +RL
Sbjct:    4 GLTPIVCVAQDTIQGKNIEDSRLRKAILEQPDNKTEHLPGYLPLVGGMPVLLTENVATELGLSNGTRGIFRQLVYEESSLGTQFSDTNFPSNAKYIMQPKYALVEFPTCKLDSGLAELQSKVVPICVSEQTFFFDVKDFLTESVAKAAKITKTTTKISVKRKALPLIPAYSMTTHKGQGQTLDKVIIDLVMPP--GPVEVASVYVPLSRIKRLEDLLIVRPFEFTTLQV-KPSAAQMQEIKRL 243          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A815AYN8_9BILA (ATP-dependent DNA helicase n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815AYN8_9BILA)

HSP 1 Score: 87.8 bits (216), Expect = 3.610e-16
Identity = 74/250 (29.60%), Postives = 125/250 (50.00%), Query Frame = 0
Query:   19 PIVSVARVTANDGMVISEDLLKSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTGELSGVQFPSNTTFHDA--NIF--NVDCIIASNFSVVAFIRSK---EIMKALPR--PFSNIPSRYK-DVFPVFPYCQDGVYVKLKKSENVKVQVSQ--LPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERL--IEIETQ 254
            PIV VA+ T     +    L+K +  L D +T  L  LLPL P MPV ++QN A+ +G+ NG  G    + + +++   +A  NIF  N   +    ++++  IRSK    + K  P+  P   +   ++ D+  + P  +     K K ++   + + +  LP VPAYS TT+K QG+T+  ++    ++        A++YV LSRV+ + DL + +          KP+   + E ERL  + I+TQ
Sbjct:  229 PIVCVAQDTCKGKPIEDPILIKKLLELSDSKTEHLSGLLPLVPGMPVILTQNIAIELGLINGMNGIFRQLVYQADSVSTNALSNIFPNNTQYVHRPLYALIEIIRSKIECNLEKLQPKLVPIPIMEQTFRVDISDILPKDK-----KPKPNQKAMLSIKRRTLPLVPAYSITTHKSQGQTLSKVVID--LKLPNDTDDIAAVYVPLSRVKRLTDLIILRHFDYKVL-LMKPSKSQVAEMERLDRLYIDTQ 470          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A820Q6A3_9BILA (ATP-dependent DNA helicase n=6 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820Q6A3_9BILA)

HSP 1 Score: 87.8 bits (216), Expect = 5.100e-16
Identity = 77/260 (29.62%), Postives = 124/260 (47.69%), Query Frame = 0
Query:   19 PIVSVARVTANDGMVISEDLLKSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTG--------------ELSGVQFPSNTTFHDANIFNVDCIIASNFSVVAFIRSK-----EIMKALPRPFSNIPSRYK-DVFPVFPYCQDGVYVKLKKSENVKVQVSQ--LPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERL--IEIETQ 254
            PI+ VA+ T     +    L+K +  L D +T  L  LLPL P MPV ++QN A+ +G+ NG  G              E+    FPSNT +          I   ++++V  ++SK     E +++   P   +   ++ D+  V P      Y + K +    + V +  LP VPAY  TT+K+QG+T+ N++    ++        A++YV LSRV+ + DL + +     T    KP+   L E ERL  + +ETQ
Sbjct:  703 PIICVAQDTCKGKPIEDSILVKKLLELSDSKTEHLPGLLPLVPEMPVILTQNVAIELGLINGMNGIFRQLVYEEDSVSTEILSETFPSNTQY----------IRKPSYALVEIVKSKIECNLEQLQSNLIPIPLMEQTFRIDIADVLPK-----YKRPKSNRKAILSVKRRALPLVPAYCITTHKIQGQTLSNVVID--LKLPNETDDIAAIYVPLSRVKRLADLIILRHFD-FTILTMKPSKSQLAEIERLDKLYLETQ 944          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A816GCM4_ADIRI (ATP-dependent DNA helicase n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A816GCM4_ADIRI)

HSP 1 Score: 87.0 bits (214), Expect = 6.720e-16
Identity = 71/253 (28.06%), Postives = 118/253 (46.64%), Query Frame = 0
Query:   20 IVSVARVTANDGMVISEDLLKSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTG--------------ELSGVQFPSNTTFHDANIFNVDCIIASNFSVVAFIRSKEIMKALPRPFSNIPSRYKDVFPVFPYCQDGVYVKLKKSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSR----ASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERLIEIETQ 254
            +V  A+ +     +    L+K +  L D +T  L  LLPL   MPV ++QN A+ +G+ NGT G              ++    FPSNT +    ++ +  I+ S+    +F + +  +  +P           D+ P     +D    K  ++  + ++   LP VPAY  TT+K QG+T+ N++          LPSR    A++YV LSRV+ + DL + +     T    KPT   + E ERL ++ T+
Sbjct:  232 MVCTAQDSCKGKSIEDPTLVKKLLELCDSKTEHLPGLLPLVSGMPVILTQNIAIELGLINGTNGIFRQLVYEEDSISSDMVSEAFPSNTRYIHKPLYAIIEIVRSDIEC-SFEQLQRNLVPIPLMEQTFRINIADIIP-----KDKRKSKSNRNTMLSIKRRALPLVPAYCITTHKSQGQTLTNVVID------LKLPSRTDDLAAIYVPLSRVKRLNDLIILRHFEYKTL-LTKPTKSQVDEIERLDQLYTE 471          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A813TB16_9BILA (ATP-dependent DNA helicase n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813TB16_9BILA)

HSP 1 Score: 86.7 bits (213), Expect = 9.650e-16
Identity = 68/214 (31.78%), Postives = 110/214 (51.40%), Query Frame = 0
Query:   40 KSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTGELSGVQFPSNTTFHDANIFNVDCIIASNFSVVAFIRSKEIMKALPRPFSNIPSRYKDVFPVFPYCQDGVYVKLK-KSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERLIEIE 252
            K +  L D +TG L   LP+ P++   ++ N +V +G+ NG T  +         T  D N   + CI+A           K I  ++   FS +P+   +VFP+FP  +   Y+K+   ++++ V+ SQ P +P YSST YK+QGKT+E +        C+ +   + +YV LSR+ +   L++ +    S F + KP+  LL E  RL EIE
Sbjct:  308 KIIKQLDDSKTGYLVSNLPIHPSITYYLTNNVSVILGLTNGITVNIL-------KTILDINTKQILCILA-----------KPINLSVEFNFSELPN---NVFPIFPLVK---YLKINFPTKSINVKRSQFPLIPNYSSTCYKVQGKTLEKMCLDLSTIDCKTIEC-SYIYVSLSRLTSWDGLYILRDFDESIF-FKKPSPDLLKEIIRLKEIE 495          
BLAST of Gcaud3147.t1 vs. uniprot
Match: A0A816U3X3_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816U3X3_9BILA)

HSP 1 Score: 85.5 bits (210), Expect = 9.870e-16
Identity = 68/229 (29.69%), Postives = 112/229 (48.91%), Query Frame = 0
Query:   12 SQSFGIKPIVSVARVTANDGMVISEDLLKSMFTLHDMQTGGLQILLPLFPNMPVRVSQNSAVGIGIANGTTG---ELSGVQFPSNTTFHDANI-FNVDCIIASNFSVVAFIRSK------EIM-KALPRPFSNIPSRYKDVFPVFPYCQDGVYVKLK---KSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCRGLPSRASLYVVLSRVRAMKDLFLTKP 226
            +   G++P+V VA+      ++    L K++  L D +T  L   LPL P MPV +++N A  +G++NGT G   +L   +  ++  F D N   N   I    +++V F   K      E+  K +P P S        +F V     + +    K   K+  + ++   LP +PAYS TT+K QG+T++ +I    +    G    AS+YV LSRV+ + DL + +P
Sbjct:   72 AMEMGLRPMVCVAQDYFQGKLIDDLRLRKTILELPDYKTEHLPGYLPLVPGMPVLLTENVATELGLSNGTRGIFHQLVYEESSADIQFQDKNFPTNTKFITQPKYALVEFPNCKLDSELAELQAKIIPIPISE----QTFLFDVKELLAENIAKAAKINKKTAKISIKRKALPLIPAYSMTTHKSQGQTLDKIIIDLVMPP--GPVEVASVYVPLSRVKRLVDLLIIRP 294          
The following BLAST results are available for this feature:
BLAST of Gcaud3147.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A225VRW8_9STRA4.460e-1929.02ATP-dependent DNA helicase n=1 Tax=Phytophthora me... [more]
A0A0W8DR42_PHYNI9.830e-1730.84ATP-dependent DNA helicase n=1 Tax=Phytophthora ni... [more]
W2Y8N0_PHYPR1.130e-1630.32Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A815UF33_9BILA1.860e-1629.96ATP-dependent DNA helicase n=2 Tax=Rotaria sp. Sil... [more]
A0A817VUV2_9BILA2.580e-1629.63Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
A0A815AYN8_9BILA3.610e-1629.60ATP-dependent DNA helicase n=5 Tax=Rotaria sp. Sil... [more]
A0A820Q6A3_9BILA5.100e-1629.62ATP-dependent DNA helicase n=6 Tax=Rotaria sp. Sil... [more]
A0A816GCM4_ADIRI6.720e-1628.06ATP-dependent DNA helicase n=2 Tax=Adineta ricciae... [more]
A0A813TB16_9BILA9.650e-1631.78ATP-dependent DNA helicase n=1 Tax=Brachionus caly... [more]
A0A816U3X3_9BILA9.870e-1629.69Hypothetical protein n=2 Tax=Rotaria magnacalcarat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 57..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_65_length_57458_cov_4.409765contigNODE_65_length_57458_cov_4.409765:51727..52500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3147.t1Gcaud3147.t1Gracilaria caudata M_176_S67 malemRNANODE_65_length_57458_cov_4.409765 51727..52500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3147.t1 ID=Gcaud3147.t1|Name=Gcaud3147.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=258bp
MAVNWFQLEKLSQSFGIKPIVSVARVTANDGMVISEDLLKSMFTLHDMQT
GGLQILLPLFPNMPVRVSQNSAVGIGIANGTTGELSGVQFPSNTTFHDAN
IFNVDCIIASNFSVVAFIRSKEIMKALPRPFSNIPSRYKDVFPVFPYCQD
GVYVKLKKSENVKVQVSQLPFVPAYSSTTYKMQGKTVENLIAYPFIRGCR
GLPSRASLYVVLSRVRAMKDLFLTKPISRSTFEYFKPTDVLLTEHERLIE
IETQHSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase