Gcaud190.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud190.t1
Unique NameGcaud190.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length147
Homology
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BLAST of Gcaud190.t1 vs. uniprot
Match: R7QKF5_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 148 bits (374), Expect = 1.210e-38
Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 0 
Query:    1 MGITSERYHEVWGSLVGGNRKRSDMDYSTTGWSRAVGRHTALISQLEPELAAVNREILYVPNATILSLDDDHLRMASRSMLRLTYLQHQKYAKKGLGSVGNALCSALIPLFIACHFPEKEKTTLH 125
            MG+++ RY +VW +L G   KR+ +DYSTTGW R   R T+LI+ +E E+AAVNRE+LY+P AT+LSLDDDHLRMASR++  L++LQ     KKGLG VGN L SAL  +F ACHF  + +  LH
Sbjct:  318 MGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLH 442
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BLAST of Gcaud190.t1 vs. uniprot
Match: R7Q906_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q906_CHOCR)

HSP 1 Score: 83.2 bits (204), Expect = 3.380e-18
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0 
Query:   45 QLEPELAAVNREILYVPNATILSLDDDHLRMASRSMLRLTYLQHQKYAKKGLGSVGNALCSALIPLF 111
            ++E E AA+NRE+LY+PNAT+ SLDDDHLRMA  +++ LT+L+     KK LG + NALCSAL P F
Sbjct:    2 EIESETAAINRELLYIPNATVFSLDDDHLRMAFSALVVLTHLRQLNNQKKSLGPLDNALCSALNPFF 68
The following BLAST results are available for this feature:
BLAST of Gcaud190.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QKF5_CHOCR1.210e-3856.00Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q906_CHOCR3.380e-1858.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_658_length_20183_cov_5.262493contigNODE_658_length_20183_cov_5.262493:7927..8367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud190.t1Gcaud190.t1Gracilaria caudata M_176_S67 malemRNANODE_658_length_20183_cov_5.262493 7927..8367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud190.t1 ID=Gcaud190.t1|Name=Gcaud190.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=147bp
MGITSERYHEVWGSLVGGNRKRSDMDYSTTGWSRAVGRHTALISQLEPEL
AAVNREILYVPNATILSLDDDHLRMASRSMLRLTYLQHQKYAKKGLGSVG
NALCSALIPLFIACHFPEKEKTTLHLETACSTPSRSYDGRGTAYDV*
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