Gcaud192.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud192.t1
Unique NameGcaud192.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length606
Homology
BLAST of Gcaud192.t1 vs. uniprot
Match: A0A2V3IEM1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM1_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 5.550e-51
Identity = 181/618 (29.29%), Postives = 272/618 (44.01%), Query Frame = 0
Query:    8 ALENARALEQQVLRDGDIDAMIMLGELLLYNEN------FASQRKRGVQMLMRAITQGKSPLAMTRLAVHLYNNRNRQDHRRAVSLLERSLKLKEDSEALNQLALCYETGRGVTKNGEVAVQLYERALRLDQNPHIMFSESWAILNTPSLRAQEKRAIALLKKALHLSPKAYMADSLGYLYHTGNGNLSRCPKKAIKWYRRAIRISRYAPSMASLADILLENEP-RVDNVQKAIRLLEDAIEVEQEQDVDIMMQLAHTYLAYDMNIERALQLFETAVIRFNSEKARAELLGLWAEGLCSSGHDH-RHIFDFLYDDDMENRHMGSRVLLAEMLWTGTSHLIVKQREAIKCLVSIPWIGHGAL-SLMLRHNLNFHPDGEKNARILMKKFNENIDRSNLHVAEAIILSESECEE-DKLLALESFQT---QIASYRHGAWLALPLRMGEFRLPFEGRQECISDTMRRFARWNNIASLNLASLLLEIEGRQ----REAVTVLEDLMNCELRLVAMLNLAYILMNNIAGVSSNWTRGVQLLEDAVRETYDVSARAMLANSLAERSDSDEGDVKRGWEIWQSVAWVLE------QDEEELSKVRRLITASSEKKWDLLEQHKQEG 602
            A++ A+  E+ + R  D+DAMI LG +LL   +      +     RGVQ+L RA+ Q  +P A   LA+H  +  N++  RR VSLLE + +   D  +L+ LA     G    K+                                                   S ++ +   L  LYH G  NL    + A+KWY+R+I +  +  S   LA +LLE       +  +A  LLEDA+     +   I +   +T      NI RA  L E AV  F S  A   LL   A G      DH R I          N H    +++A +LW+G+  + V +  AI+    I    HG + +LMLR++    P   K A      F             A++ SE E    D + A + F+     +    +  W+ L +R     LP+ G + C +  + RF    NI SLNLASLLL+   +      EA+T+LE LM  ELR +A +NL Y+L   + G++ +  R +++L   + ET DVSAR +LA++LAER++         W + +S +W L        DEEEL K+ RL+   S K W++      +G
Sbjct:    8 AVQLAKRYERAIKRFNDVDAMIQLGHMLLSGRHSSGAVGYKIDHCRGVQLLERAVKQADNPRAKALLALHFRDFGNKKQRRRVVSLLEDAFRQMGDPVSLHVLAKVLYDGDCGEKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNESDIMHRLARLYHEGTVNLEPSFENAVKWYQRSIDVGEHCDSKYYLARLLLETPVGEYRDPTRAALLLEDALTQSYTERSLICLANVYTVHRQVANIPRAAYLLERAVCDFGSTAATVHLLNFCAFGFQGFPLDHQRAILICERHLSCTNPHRTVMMIMASILWSGSVSVRVDRERAIQVARQIE-NDHGIMFALMLRYDAPSRPADRKLAASYFTNFRHCY-------VNALLTSEQEDPRFDSVQAEQMFRLARGNLLGTDYLGWIPLYIRKSTLGLPYHGDERCFTKNVMRFCSVANITSLNLASLLLDRTSKSPEQCAEAITILECLMETELRDIAAVNLCYVLWYGVGGIAQDQPRALKMLVRFIGETRDVSARVLLASTLAERANESN------WNL-ESSSWTLSAIRAEISDEEELQKLARLL---SPKAWEVFTLQNAQG 607          
BLAST of Gcaud192.t1 vs. uniprot
Match: A0A2V3ITU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITU4_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 9.360e-18
Identity = 137/538 (25.46%), Postives = 232/538 (43.12%), Query Frame = 0
Query:   71 HLYNNRNRQDHRRAVSLLERSLKLKEDSEALNQLALCYETGRGVTKNGEV-AVQLYERALRLDQNPHIMFSESWAILNTPSLRAQEKRAIALLKKALHLSPKAYMADSLGYLYHTGNGNLSRCPKKAIKWYRRAIRISRYAPSMASLADILLENEPRVD-NVQKAIRLLEDAIEVEQEQD-VDIMMQLAHTYLAYDMNIERALQLFETAVIRFNSEKARAELLGLWAEGLCSSGHDHRHIFDFLYDDDMENRHM-----GSRVLLA-EMLWTGTSHLIVKQREAIKCLVSIPWIGHGALSLMLRHNLNFHPDG--EKNARILMKKFNENIDRSNLHVA--EAIILSESECEEDKLLALESFQTQIASYRHGAWLALPLRMGEFRLPFEGRQECISDTMRRFARWN--NIASLNLASLLLE---IEGRQREAVT-VLEDLMNCELRLVAMLNLAYILMNNIAGVSSNWTRGVQLLEDAVRETYDVSARAMLANSLAERSDSDEGDVKRGWEIWQSVAWVLEQDEEELSKVRRLITASSE 589
            +LY+  NR +  R +SLLER+  L E  E    LA      R   K   V A QL  RALRL +N   M+     +L+   ++     AI+LLK+ + ++  A    +LG ++  G+ +L    ++A+ WY RAI    +  +   +A  +  N   +  +   A  LL++ +     +D + ++  L + +     +   A  L + AV +F+   +   L      G+  S +      +F Y   +  R       GS ++   E+L  G      K RE  + L++I      +  L+L   L     G  E + +   +   +  D  NL+V    A+ +SE E   +  + ++        Y+  A L            ++ R+       R    W   ++  LNLA+LLLE   I    R+  T +L +L+  +L  +A +NL Y++ + I GV  N    V+L E A        A A+LA +LA  +D    DV+R  ++W+ V    EQ+  EL +  R+    SE
Sbjct:   79 YLYDEGNRAERHRGISLLERASTLVEHPEVWYNLAFALVYPRCSIKRQPVRAAQLLRRALRLGENTKCMWLLGDVLLHEQEVQPDTAYAISLLKRVIEITNDAEKMYTLGCIFSKGSAHLLADKRRAVHWYARAILTGNHTEAKFHMAVTITRNPKSIPPDPVVAKSLLKEVLTTATHRDAISVLTDLLYGW-KQTRDFAFAASLSDFAVRKFDCTDSMYRL------GIILSINAPNVPVNFPYAVSLFERCYRSTGNGSALIRGIEILSYGAPGFPAK-RELARDLLAIQQSEPDSEKLLLSSMLRVGVQGVVEADRKRAYELLRDYADAGNLYVTMNHAMFMSE-ESGGNSCITID--------YKEAAAL--------LNSRYDRRE-------RHLFSWTPLSLPGLNLAALLLEGHQITPDDRDIGTGLLYELLETDLGDLAAINLGYLVWHGICGVPQNRKDAVKLYEFAFVLRPGAIAGALLAGALANDTDETAADVERAVKLWRWVRIACEQEGAELDEFERVCKVMSE 584          
The following BLAST results are available for this feature:
BLAST of Gcaud192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEM1_9FLOR5.550e-5129.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITU4_9FLOR9.360e-1825.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 570..590
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 177..255
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 10..176
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 10..176
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 177..255
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 4..182
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 154..277
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 210..245
e-value: 350.0
score: 0.3
coord: 170..208
e-value: 37.0
score: 8.8
coord: 62..96
e-value: 41.0
score: 8.3
coord: 98..133
e-value: 1.7E-5
score: 34.3
coord: 25..60
e-value: 140.0
score: 3.8
coord: 497..533
e-value: 50.0
score: 7.6
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 63..93
e-value: 32.0
score: 5.4
coord: 98..131
e-value: 6.0E-6
score: 26.8
coord: 178..204
e-value: 0.0068
score: 17.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..351
e-value: 3.7E-36
score: 126.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_657_length_20189_cov_4.904866contigNODE_657_length_20189_cov_4.904866:7918..9735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud192.t1Gcaud192.t1Gracilaria caudata M_176_S67 malemRNANODE_657_length_20189_cov_4.904866 7918..9735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud192.t1 ID=Gcaud192.t1|Name=Gcaud192.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=606bp
MASFRKHALENARALEQQVLRDGDIDAMIMLGELLLYNENFASQRKRGVQ
MLMRAITQGKSPLAMTRLAVHLYNNRNRQDHRRAVSLLERSLKLKEDSEA
LNQLALCYETGRGVTKNGEVAVQLYERALRLDQNPHIMFSESWAILNTPS
LRAQEKRAIALLKKALHLSPKAYMADSLGYLYHTGNGNLSRCPKKAIKWY
RRAIRISRYAPSMASLADILLENEPRVDNVQKAIRLLEDAIEVEQEQDVD
IMMQLAHTYLAYDMNIERALQLFETAVIRFNSEKARAELLGLWAEGLCSS
GHDHRHIFDFLYDDDMENRHMGSRVLLAEMLWTGTSHLIVKQREAIKCLV
SIPWIGHGALSLMLRHNLNFHPDGEKNARILMKKFNENIDRSNLHVAEAI
ILSESECEEDKLLALESFQTQIASYRHGAWLALPLRMGEFRLPFEGRQEC
ISDTMRRFARWNNIASLNLASLLLEIEGRQREAVTVLEDLMNCELRLVAM
LNLAYILMNNIAGVSSNWTRGVQLLEDAVRETYDVSARAMLANSLAERSD
SDEGDVKRGWEIWQSVAWVLEQDEEELSKVRRLITASSEKKWDLLEQHKQ
EGSVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf