Gcaud7842.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7842.t1
Unique NameGcaud7842.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length895
Homology
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A2V3IYY6_9FLOR (DNA polymerase kappa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY6_9FLOR)

HSP 1 Score: 1040 bits (2688), Expect = 0.000e+0
Identity = 554/899 (61.62%), Postives = 672/899 (74.75%), Query Frame = 0
Query:    1 MQPDDPLGTAATAAEPAHTEHGNAFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCHGGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTVVRGIKRIDTFFTATNRNT-----SHGPKRDSVPLRDPTKETVQSSGSSSPLNIGERNEESNRKILPVVSDVEEIAPAPEKYREKGKNDQPTGSRNVPGQDRQVSLMDIDEDEIEVEQADEQVPQVRKADKT-----LTQKIPPGWDKAVFKALPLALQTELLENDANQMFSNQTRVRPELADVPK--APCGRESKKRTSVHTKNKHLAKLTKRPRRKQKAQITMTQFADIRKLRDKGNDVLNAEEFRSKPLGECIELLHDLNHGRRFSALGGSRRKDG-GSKSSKAVTFLDRDTSD-AIGGDALDIPSPPSMSSDSEMEDGDKIVQIMQKQGVEHKQIYAEEELEAFSDKLYAWMNRTVGEVKSAHVELLRGRLIEFVRMKQLEHVSENVRLLRRFAECECLKGWRPSVNVLIEEVKEETRQQHGLDLSLPPLFSGMS 885
            MQPD    +A+  A        N+FW+DPRPSNRNPNFVRDYFQSSRLHFIGSFRARYE+MMVAVAKRL VNPGSLIS AP     ER+I+HIDMDCFFASVAVKRDPSLR KCIAVCHGGGEISSCSYEAR +GVRAGMFAKDARKLCP LLSVPYHFP YE+ISIQIY+LF+DYPGV+VEAVSVDEAYLD T+     TSQ  A+ L ++IRSRIV ETGCTASAGIGPSKLIARLATKAAKP+GQLRVRPE VIEYIDTLKVSDLPGVGW TSKKMT++GI ++P LR K+LSFLQT FG+RQGQT H+LARAID RPV+PLKPRKSIGAEASWGIRFE++ED+KL+ FI+DMASEVA+R+ + GASGSK+ +KLYR+KPNSSM+GYKFLGHGPCT++SR+YN+PR C   TL   L DSC RV+ ET+IRNDEFRG+GLQV+DLKFG+L+FDHS   V+G+KRID+FF  +NR       +HG  R + P  D   +T   +  SS     +R+E        ++   +EI P                                +ED +E+  AD ++P    ADK      LT KIP GWD AVFKALP +LQ ELL+N+ NQ  +++   R    D  K  AP    SKKR S  T+ +++A+   RPRR+Q+AQITMTQFADIR+LRDKGNDVL+AEEFR +PL EC+ELL DLNHGRR SA    +R+ G  ++  K+V+F + +++  A   + L+IPSPP MSSD + ++ ++++ +++K GVEH QIYA E++  FSDKLY+WM RT  +VKS HVEL+RGRL+E +R+KQL+ V ENVRLL RFAE + L+GWR  VN L+ E+ EETR+QHGLDL LPPLF   S
Sbjct:    1 MQPDHRQLSASNRAHLPQPTQPNSFWNDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYEAMMVAVAKRLKVNPGSLISAAPTSSCAERLIVHIDMDCFFASVAVKRDPSLRAKCIAVCHGGGEISSCSYEARKFGVRAGMFAKDARKLCPNLLSVPYHFPTYEQISIQIYALFHDYPGVFVEAVSVDEAYLDITDTAKDATSQAGADDLVQSIRSRIVRETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPENVIEYIDTLKVSDLPGVGWSTSKKMTQIGIETIPQLRRKSLSFLQTNFGERQGQTLHDLARAIDSRPVEPLKPRKSIGAEASWGIRFEENEDDKLSNFISDMASEVASRVESVGASGSKVCVKLYRRKPNSSMLGYKFLGHGPCTILSRMYNIPRPCDWATLRKALCDSCLRVIKETRIRNDEFRGLGLQVVDLKFGELRFDHSGAPVKGVKRIDSFFNVSNRRAPASQATHGQLRKTSPPND--VDTASKAKGSS-----DRDE-------VLLEKEDEITPXXXXXXXXXXXXXXXXXXXXXXX---XXXAQPEEDGVEIV-ADNRIPN-NGADKLPDNHGLTSKIPFGWDTAVFKALPESLQAELLQNNRNQTTTSRANTRRATRDETKSAAPTRGASKKRASSRTRQRNVAR---RPRRRQRAQITMTQFADIRELRDKGNDVLDAEEFRCRPLKECVELLQDLNHGRRNSAFVNRQRRSGVPTEKRKSVSFAEANSNRLAAVEETLEIPSPPCMSSDYDSDENNRMLHVVEKAGVEHTQIYATEDVTDFSDKLYSWMRRTAVDVKSGHVELVRGRLMECIRLKQLDEVCENVRLLHRFAEGDGLEGWRVGVNALLREIGEETRRQHGLDLKLPPLFPSAS 877          
BLAST of Gcaud7842.t1 vs. uniprot
Match: R7QH65_CHOCR (UmuC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH65_CHOCR)

HSP 1 Score: 713 bits (1840), Expect = 5.620e-243
Identity = 418/878 (47.61%), Postives = 553/878 (62.98%), Query Frame = 0
Query:   25 FWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAP-------KPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCHGGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAAD--TSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTVVRG-IKRIDTFF-TATNRNTSHGPKRDSVPLRDPTKETVQSSGSSSPLNIGERNEESNRKILPVVSDVEEIAPAPEKYREKGKNDQPTGSRNVPGQDRQVS--LMDIDEDEIEVEQADEQV-----PQVR----KADKTLTQKIPPGWDKAVFKALPLALQTELLENDANQMFSNQTRVRPELADVPKAPCGRESKKRTSVHTKNKHLAKLTKRPRRKQKAQITMTQFADIRKLRDKGNDVLNAEEFRSKPLGECIELLHDLNHGRRFSA--LGGSRRKDGGSKSSKAVTFLDRDTSDAIGGDALDIPSPPSMSSDSEMEDGD-KIVQIMQKQGVEHKQIYAEEELEAFSDKLYAWMNRTVGEVKSAHVELLRGRLIEFVRMKQLEHVSENVRLLRRFAECECLKGWRPSVNVLIEEVKEETRQQHGLDLSL 877
            FW DPRP+N NPNFVRDYF SSRLHFIGSFRARYESMMVAVA  L VNP  L+  +        K    ERVI+HIDMDCFFAS+AVK++P+L GK IAVCHGGGEISSCSYEAR +GVRAG F +D RKLCP LLSVPY FP+YEE S+ IY++FY  P V VEAVSVDEAYLD T A+  D   SQ  A++L  ++R +I   TGCTASAGIGPSKL+ARLATKAAKP+GQ+RVR E VI Y+DTL+V DLPG+GWRT +++ E  I ++P LR+ +L+ LQ++FG RQGQ F+ LARA+D RPV+PLKPRKSIGAEASWG+RF ++E++K  KFI DMA EVA R+  AGA G+K+  K Y++K N+SMVGYK LGHGPC V +R   +        L   LR +C R+ ++  + +DE RG+G+Q+ DL F DL FDH+     G  +RID+FF TA   +  +G    S+  R            SS   +G+ + +S         D EE     E  ++  +  + +  R     D Q    L DI EDE  +E A  QV     PQV+    KA ++    IP GWD+ VF  LP  LQ ELL++ ++ + +     R   A        R +  +   + K K  A   +R +R++  Q+TMTQFADI  L+ +G++VL+AEEFR  PL +C+ELL DL  G+  +   L   RR     ++ +     D         + L+IPSPPS+SSDS   DG   + +++ +QG E   +YAEEEL  +++ L  WM    G+VKS HVEL+RGR++E +R K+LE V   +RL+R F   E +  W    N ++++V+EE R  +   L+L
Sbjct:   17 FWRDPRPTNENPNFVRDYFASSRLHFIGSFRARYESMMVAVAANLAVNPRLLLQSSAEKGLLSAKTTRAERVIVHIDMDCFFASIAVKKNPALAGKPIAVCHGGGEISSCSYEARKFGVRAGTFFRDGRKLCPDLLSVPYEFPMYEEASLLIYAIFYSSPTVSVEAVSVDEAYLDITLAIGDDRHASQSGADALVRSLRDKIFASTGCTASAGIGPSKLVARLATKAAKPNGQMRVRQENVIAYLDTLQVKDLPGIGWRTGRRLREKSITTVPQLRALSLAELQSEFGGRQGQVFYNLARALDARPVEPLKPRKSIGAEASWGVRFTKEEEDKARKFIMDMADEVAARVEAAGAYGTKVVFKEYKRKKNASMVGYKHLGHGPCVVFTRSARIQTRSAGRPLKELLRQACIRLHNDLGLHSDELRGVGVQMTDLSFADLNFDHAEATTAGSTRRIDSFFETAVPSSIGNGL---SISQRRKAANEAIKDLPSSRNGLGQVSNQSKGGAF----DKEEPFEV-EFVKKHSERIEASKERMASPIDEQTETHLADI-EDEDRIEPAPAQVEFQRAPQVKDAVGKAHESRELDIPKGWDREVFHNLPKDLQDELLKSSSHAIAAGHPPPREAEAVTDDTSAHRIAPPKRRRNPKPKPAAAQAERAKRRKAGQVTMTQFADISNLKKRGHNVLDAEEFREMPLRDCVELLGDLR-GKPLNVRTLQTDRRNVETERTGRREGEEDEL-------EDLEIPSPPSLSSDS---DGSCSMTEMVLRQGFEEGPVYAEEELSTYAEVLRVWMRTVAGDVKSGHVELIRGRVLELLRRKKLERVCSEMRLVRLFVGEEGMGAWVGHYNRILDDVQEECRVLYKFRLAL 874          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A7S3A8F8_9RHOD (DNA polymerase kappa (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8F8_9RHOD)

HSP 1 Score: 386 bits (991), Expect = 6.590e-118
Identity = 219/472 (46.40%), Postives = 293/472 (62.08%), Query Frame = 0
Query:   30 RPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISP--APKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCHG-GGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEA------VAADTSQFN---AESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTVVRGIKRIDTFFTATNRNTSHGPKRDSVP 489
            + +  NPNFVRDYF +SRLHFIGSFRARYES++ AVA     +   L+      K     R IIHIDMDCFF SVAV +DPSL G  + VCH  GGEISS SYEAR  GVRAGMF ++A KLCP+L  V Y F  YE ++ QIY +FY+   V VEAVSVDEA+LD T+A      +AA     N   AE +A  IR RI  ETGC +SAGIG +KL+ARLATK AKP+GQ  +  E  ++Y+  L V DLPGVGW T  K+ ELG+    DL+ ++LS LQ   G++ G++ +   R  D + VQP+K RKS+GAEASWG+RF +DE  K++ F+ D+A+ V+ ++  A A G ++ IK+Y K  N+S+  +K LGHGPC + +R     R    +T+     +    +L+  KI   E RG+G+QV DL F D+       + R +K+  T   +   +T+  P    +P
Sbjct:  210 KSTRENPNFVRDYFSASRLHFIGSFRARYESLIAAVAMHRGCSASDLLRTKGTTKENGVMRSIIHIDMDCFFVSVAVAKDPSLAGIPLVVCHQHGGEISSASYEAREKGVRAGMFFREAVKLCPELKIVTYRFEDYERVTFQIYCIFYELSPV-VEAVSVDEAFLDVTDADLPQDILAAMPELSNMPPAERIALTIRRRIAEETGCPSSAGIGANKLLARLATKRAKPNGQFYLSDEEAVQYVADLPVRDLPGVGWSTGGKLQELGVERCDDLQRRSLSQLQALVGEKNGESLYRACRGQDDKQVQPMKVRKSLGAEASWGVRFYEDEGLKMHDFVRDLAAVVSEKLQEARAVGQRITIKVYWKMKNASLP-HKTLGHGPCDIYNRSVKTERTSDAKTIA----EKSIELLNAVKIPPQELRGLGIQVHDLVFLDIVDSSGSNIARFLKQSST---SVGGSTASNPASAKIP 672          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A087ST14_AUXPR (DNA repair protein REV1 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087ST14_AUXPR)

HSP 1 Score: 311 bits (798), Expect = 8.740e-94
Identity = 185/445 (41.57%), Postives = 255/445 (57.30%), Query Frame = 0
Query:    5 DPLGTAATAAEPAHTEHG-NAFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGL 443
            DP    A  AE A      +     P+ S  +PNFV  +F +SRLHFIG ++ R ES+M++         G +  P P P    +VI H+D+DCFFASVA    P   GK +AVCH     G  EISS +YEAR YG+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  Q     LA  +R+ I   TGCTAS GIG + LIARLATK AKPDGQ  ++       + +L++SDLPGVGW TSKK+  LG+ S+ DL++ + + LQ + GD+ G    + +R ID R V P   RKS+GAE +WG+RF+  +D    +F+  +A EV TR+  AG  G  + +KL +K+        KF+GHG C  +SR +   R   +   IH  R +C  +L+   + + + RGIGL
Sbjct:    8 DPAEMRAAQAEAARLRAACDMLKGAPKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQ-----LASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQDA--TRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAACD-MLTSLHVPHADIRGIGL 429          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A1D1ZNW1_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZNW1_AUXPR)

HSP 1 Score: 315 bits (808), Expect = 2.270e-92
Identity = 189/463 (40.82%), Postives = 263/463 (56.80%), Query Frame = 0
Query:    5 DPLGTAATAAEPAHTEHG-NAFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTV 461
            DP    A  AE A      +     P+ S  +PNFV  +F +SRLHFIG ++ R ES+M++         G +  P P P    +VI H+D+DCFFASVA    P   GK +AVCH     G  EISS +YEAR YG+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  Q     LA  +R+ I   TGCTAS GIG + LIARLATK AKPDGQ  ++       + +L++SDLPGVGW TSKK+  LG+ S+ DL++ + + LQ + GD+ G    + +R ID R V P   RKS+GAE +WG+RF+  +D    +F+  +A EV TR+  AG  G  + +KL +K+        KF+GHG C  +SR +   R   +   IH  R +C  +L+   + + + RGIGL V +L   + + D  + V
Sbjct:  208 DPAEMRAAQAEAARLRAACDMLKGAPKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQ-----LASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQDA--TRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAACD-MLTSLHVPHADIRGIGLGVRELCHWEERIDWGQAV 647          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A2P6TQ91_CHLSO (DNA polymerase kappa n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ91_CHLSO)

HSP 1 Score: 312 bits (800), Expect = 1.980e-87
Identity = 171/422 (40.52%), Postives = 253/422 (59.95%), Query Frame = 0
Query:   29 PRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQV 445
            P+ +  +PNFV+ +++SSRLHFIG+++AR E++M + A R    P      AP    R RV++HIDMDCFFASVA    P  +GK +AVCH     G GE+S+C+YEAR++GVR+GM    A+ LCP L+ VPY F  YEE S ++Y +   +    V+A+S DEAYLD T          + E LA  IR+ I   TGCTASAGIGP+ L+AR+AT  AKP+GQL V      +Y+  L V DLPGVGW T +K+   GI ++ D+ +++   LQ++ G + G    + A   D R V+P K RKS+GAE +WG+RF+ D+D +  + +  +A++V  R+      G ++ +KL R+K  ++    KF+GHG C  +SR   + R   +      +   C  +L  +++   + RG+G+ V
Sbjct:  310 PKSTRDDPNFVQSFYKSSRLHFIGTWKARIETLMESDAARRGPQP------APHLPGRPRVVMHIDMDCFFASVAEAAHPVFKGKPLAVCHSASAHGTGEVSTCNYEARAFGVRSGMMISRAKDLCPDLIVVPYMFDKYEETSEKVYGILLRHSAC-VQALSCDEAYLDVT-------GLGDPEQLAATIRAEIAAATGCTASAGIGPNPLLARIATDHAKPNGQLAVTQAAAAQYLQALPVKDLPGVGWSTEQKLESRGITTVADVLARSKELLQSELGPKLGAQLWDYAHGRDDRRVEPPKKRKSVGAEVNWGVRFQSDDDAR--RLLDSIAADVQQRLQQGSLKGRRLTLKLKRRKQGAAEP-LKFMGHGECDNLSRSVTLARFTDSA---EDIGRECWELLRASRVPFADIRGMGITV 711          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A1D1ZMW5_AUXPR (DNA repair protein REV1 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZMW5_AUXPR)

HSP 1 Score: 312 bits (799), Expect = 3.360e-87
Identity = 186/451 (41.24%), Postives = 258/451 (57.21%), Query Frame = 0
Query:    5 DPLGTAATAAEPAHTEHG-NAFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLK 449
            DP    A  AE A      +     P+ S  +PNFV  +F +SRLHFIG ++ R ES+M++         G +  P P P    +VI H+D+DCFFASVA    P   GK +AVCH     G  EISS +YEAR YG+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  Q     LA  +R+ I   TGCTAS GIG + LIARLATK AKPDGQ  ++       + +L++SDLPGVGW TSKK+  LG+ S+ DL++ + + LQ + GD+ G    + +R ID R V P   RKS+GAE +WG+RF+  +D    +F+  +A EV TR+  AG  G  + +KL +K+        KF+GHG C  +SR +   R   +   IH  R +C  +L+   + + + RGIGL +  L+
Sbjct:  208 DPAEMRAAQAEAARLRAACDMLKGAPKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQ-----LASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQDA--TRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAACD-MLTSLHVPHADIRGIGLGMSKLE 635          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A8J4AXY4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXY4_9CHLO)

HSP 1 Score: 311 bits (797), Expect = 2.310e-86
Identity = 177/427 (41.45%), Postives = 251/427 (58.78%), Query Frame = 0
Query:   29 PRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDED--EKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDL 448
            PR +  +P F+  +F++SRLHFIG+++ R E++M  V        G+  +PAP  K  ERV+IH+DMDCFFAS A    P L GK +AVCH     G GE+SS +Y ARS+GVRA MF  +A++ CP L+ VPY F  Y+ IS Q+Y +   Y  + V+ VS DEA+LD T          + E LA  +R+ I   T CTASAGIGP+ L+A+LAT+ AKP+GQ RV    V+ ++  LKV DLPGVGW  + K+  LGI+++  + S + + LQ + G + G      A  +D R V+P K RKS+GAE ++GIRFE D     +  +F+ ++A EVA R+  AG  G  + +K+ R++  +     KF+GHG C  +SR   + R     T    LR     +L    I  +E RG+G+ V  L
Sbjct:  451 PRSTRNDPRFMETFFKASRLHFIGTWKTRIEALMAEVE-------GAAPNPAPYTKGTERVVIHVDMDCFFASAAAVGRPELAGKPVAVCHSNSARGTGEVSSANYLARSFGVRADMFIAEAKRRCPDLIVVPYEFERYQTISEQVYRILMSYTSI-VQPVSCDEAFLDVT-------GLGDPEQLAARLRAEIAAATECTASAGIGPNILVAKLATRRAKPNGQFRVTQGTVLNFLGDLKVEDLPGVGWSMASKLEGLGISTVRQVWSTSRTLLQKQLGAKVGADLWAHAHGLDDRRVEPPKARKSVGAEINYGIRFEADAAGLAEAERFLGELAGEVAARLKTAGVRGRSLVLKVKRRQAGAPQPA-KFMGHGACDNISRSVTLSRFTDDPT---DLRREAVGLLRALNIPPEELRGLGITVAKL 858          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A7S0ZB95_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB95_9RHOD)

HSP 1 Score: 297 bits (761), Expect = 1.030e-85
Identity = 174/427 (40.75%), Postives = 248/427 (58.08%), Query Frame = 0
Query:   32 SNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLI---SPAPKPKAR----ERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCHGG----------GEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDAT------------EAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKM-TELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDE--KLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKR 426
            ++ N NFV+D+F  SRLHFIGSFRARYE +M  VA+RL +  G+ +   S   + +      ER+++HIDMD FFAS A+  DPSLRG  + VCH            GEIS+ +YEARSYG+RAGMF K A ++CP + SVPY F +YE+++ ++ +L + +  + VE  SVDEAY+D T            + V    ++ + +     +R+RI  ETGCTAS GIG +KL ARLATK AKP+G  R+ P+    ++  LK+ DLPG+G+RT +K+ TEL + +   LR  + + LQ  FG   G   +E  R      V PL  RKSI A   WG+RF   + E  K  +F+  +A EVA R   A A GS+++++L + K N+    YK LG G C  +    ++      E+L + L   C+R
Sbjct:  242 TSENVNFVKDFFAQSRLHFIGSFRARYEQLMENVAERLGMKSGNALLQDSVTCQEQGEHMFVERIVLHIDMDAFFASCAISVDPSLRGHPVVVCHSSSTSSHAVTSRGEISAANYEARSYGIRAGMFLKTALQMCPHVKSVPYDFELYEKVATKVITLLHAFARL-VEVRSVDEAYIDLTGQDTWPVRGKEMKEVKPLKTKSDVDEFCRELRNRIEAETGCTASIGIGSNKLAARLATKKAKPNGIYRILPDETESFVAQLKIRDLPGIGYRTCEKLETELRVKTTEQLRKLSKTALQNVFGANAGVLIYECVRGRSNEKVIPLAARKSISATVGWGVRFGAGDTEYNKAVRFVVSLAEEVADRARQADAVGSRVSVELLKAKSNAGEP-YKLLGQGSCDRIRSSASILFAHNQESLRNELTKVCER 666          
BLAST of Gcaud7842.t1 vs. uniprot
Match: A0A6U9RMQ7_9CHLO (DNA repair protein REV1 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMQ7_9CHLO)

HSP 1 Score: 302 bits (774), Expect = 2.750e-85
Identity = 175/454 (38.55%), Postives = 267/454 (58.81%), Query Frame = 0
Query:    4 DDPLGTAATAAEPAHTEHGNAFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFASVAVKRDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPVYEEISIQIYSLFYD-YPGVYVEAVSVDEAYLDATEAVAADTSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLRVRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQTKFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLNKFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTVVSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLKFG 451
            D+ L  A   AE A +         PR ++ +PNF+  YF++SRLHFIG+++ R E++M+ V++        ++ P  +     R I+H+DMDCFFASVA+ ++P  RGK + VCH     G  E+SS +YEAR +GVRA MF  +A++LCPQL+ +PY F +Y+++S  +Y + ++ +PG  V+ VS DEAY+DAT          +  S A  +RS I   TGCTASAGI  + L++++AT  AKP+GQL V  E  + ++ ++KV++LPGVGW T +K+T + I+   DL     S LQ +FG + G+      R ID R V+    RKSIGAE +WG+RF  + +    KF+ D+  E+  R+ +A   G  + +KL RK+  ++   YKFLGHG C  +S+   +  +C  +     L +SC  +    +   +E RG+G+ V  L  G
Sbjct:  174 DESLNEALRVAEEARSSCA-VLGGRPRSASHDPNFMDTYFKASRLHFIGTWKERIENLMIKVSQE------QVVPPIRQDGHFTRAIMHVDMDCFFASVAMLKNPHARGKPLVVCHSNSNQGRAEVSSANYEARKFGVRANMFIGEAKRLCPQLIVMPYQFDLYQDVSEAVYLIMFEMFPG-RVQPVSCDEAYIDATNLD-------DPISWASKVRSEIFSRTGCTASAGISCNMLLSKIATGRAKPNGQLFVSFEEGVAFLKSMKVAELPGVGWSTRQKLTAMNIDICADLVEVPKSVLQQEFGQKTGELLFNHCRGIDGRKVETQPVRKSIGAEVNWGVRFNHEAEAI--KFMEDLCGEIQKRLRHAKLKGRCVTLKLKRKQQGANEP-YKFLGHGKCDNLSKSLTLA-SCIDDA--KELMNSCLSLWQSMRFPANELRGVGISVTRLDNG 606          
The following BLAST results are available for this feature:
BLAST of Gcaud7842.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYY6_9FLOR0.000e+061.62DNA polymerase kappa n=1 Tax=Gracilariopsis chorda... [more]
R7QH65_CHOCR5.620e-24347.61UmuC domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S3A8F8_9RHOD6.590e-11846.40DNA polymerase kappa (Fragment) n=3 Tax=Rhodosorus... [more]
A0A087ST14_AUXPR8.740e-9441.57DNA repair protein REV1 n=1 Tax=Auxenochlorella pr... [more]
A0A1D1ZNW1_AUXPR2.270e-9240.82Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A2P6TQ91_CHLSO1.980e-8740.52DNA polymerase kappa n=1 Tax=Chlorella sorokiniana... [more]
A0A1D1ZMW5_AUXPR3.360e-8741.24DNA repair protein REV1 n=2 Tax=Auxenochlorella pr... [more]
A0A8J4AXY4_9CHLO2.310e-8641.45Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7S0ZB95_9RHOD1.030e-8540.75Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A6U9RMQ7_9CHLO2.750e-8538.55DNA repair protein REV1 n=1 Tax=Picocystis salinar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 327..454
e-value: 1.5E-26
score: 94.9
IPR038401Rev1, C-terminal domain superfamilyGENE3D1.20.58.1280coord: 784..877
e-value: 3.9E-5
score: 26.0
NoneNo IPR availableGENE3D6.10.250.1490coord: 36..68
e-value: 2.2E-6
score: 29.2
NoneNo IPR availableGENE3D1.10.150.20coord: 266..317
e-value: 1.4E-13
score: 52.9
NoneNo IPR availableGENE3D3.40.1170.60coord: 99..156
e-value: 3.1E-24
score: 86.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..557
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR45990DNA REPAIR PROTEIN REV1coord: 30..669
IPR001126UmuC domainPFAMPF00817IMScoord: 93..241
e-value: 6.0E-43
score: 146.4
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 90..272
score: 52.849464
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 69..265
e-value: 7.0E-39
score: 135.0
IPR022880DNA polymerase IVHAMAPMF_01113DNApol_IVcoord: 87..470
score: 28.3447
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 83..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_647_length_20364_cov_4.929216contigNODE_647_length_20364_cov_4.929216:4780..7464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7842.t1Gcaud7842.t1Gracilaria caudata M_176_S67 malemRNANODE_647_length_20364_cov_4.929216 4780..7464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7842.t1 ID=Gcaud7842.t1|Name=Gcaud7842.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=895bp
MQPDDPLGTAATAAEPAHTEHGNAFWSDPRPSNRNPNFVRDYFQSSRLHF
IGSFRARYESMMVAVAKRLNVNPGSLISPAPKPKARERVIIHIDMDCFFA
SVAVKRDPSLRGKCIAVCHGGGEISSCSYEARSYGVRAGMFAKDARKLCP
QLLSVPYHFPVYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAAD
TSQFNAESLAENIRSRIVMETGCTASAGIGPSKLIARLATKAAKPDGQLR
VRPERVIEYIDTLKVSDLPGVGWRTSKKMTELGINSLPDLRSKNLSFLQT
KFGDRQGQTFHELARAIDRRPVQPLKPRKSIGAEASWGIRFEQDEDEKLN
KFITDMASEVATRIANAGASGSKMAIKLYRKKPNSSMVGYKFLGHGPCTV
VSRIYNVPRNCGTETLIHTLRDSCKRVLSETKIRNDEFRGIGLQVLDLKF
GDLKFDHSRTVVRGIKRIDTFFTATNRNTSHGPKRDSVPLRDPTKETVQS
SGSSSPLNIGERNEESNRKILPVVSDVEEIAPAPEKYREKGKNDQPTGSR
NVPGQDRQVSLMDIDEDEIEVEQADEQVPQVRKADKTLTQKIPPGWDKAV
FKALPLALQTELLENDANQMFSNQTRVRPELADVPKAPCGRESKKRTSVH
TKNKHLAKLTKRPRRKQKAQITMTQFADIRKLRDKGNDVLNAEEFRSKPL
GECIELLHDLNHGRRFSALGGSRRKDGGSKSSKAVTFLDRDTSDAIGGDA
LDIPSPPSMSSDSEMEDGDKIVQIMQKQGVEHKQIYAEEELEAFSDKLYA
WMNRTVGEVKSAHVELLRGRLIEFVRMKQLEHVSENVRLLRRFAECECLK
GWRPSVNVLIEEVKEETRQQHGLDLSLPPLFSGMSAEAGLLVRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR038401Rev1_C_sf
IPR001126UmuC
IPR043128Rev_trsase/Diguanyl_cyclase
IPR022880DNApol_IV
IPR043502DNA/RNA_pol_sf