Gcaud7841.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7841.t1
Unique Name	Gcaud7841.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	155

Homology

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A2V3IZ55_9FLOR (V-type proton ATPase subunit F n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ55_9FLOR)

HSP 1 Score: 178 bits (452), Expect = 3.070e-55
Identity = 91/118 (77.12%), Postives = 98/118 (83.05%), Query Frame = 0

Query:   37 KSRDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGSA 154
            KSR+ GFLIAVIGDEDTT               GSNFFVVDPK TPVQAIEEAF +FTEREDIAI+LINQYIADKIR+TVT+F+ PVPA+LEIPSKEHPYDPSKD ILQRVRGMLGSA
Sbjct:    8 KSREGGFLIAVIGDEDTTTGFLLAGVGDNQPSHGSNFFVVDPKHTPVQAIEEAFNKFTEREDIAIILINQYIADKIRTTVTRFNAPVPAILEIPSKEHPYDPSKDGILQRVRGMLGSA 125

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A1X6P7U4_PORUM (V-type proton ATPase subunit F n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7U4_PORUM)

HSP 1 Score: 148 bits (374), Expect = 2.450e-43
Identity = 79/120 (65.83%), Postives = 90/120 (75.00%), Query Frame = 0

Query:   35 IYKSRDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGSA 154
            + KSR  G+LIAVIGD DT                  N+F VD K+TPV AIE+AFKRFTEREDIAI+LINQYIA++IR  ++KFS PVPAVLEIPSKEHPYD SKDSILQRVR MLG+A
Sbjct:    9 LAKSRPGGYLIAVIGDADTVAGFLMAGVGERDGKKEVNYFEVDLKDTPVPAIEDAFKRFTEREDIAIVLINQYIANEIRPVLSKFSAPVPAVLEIPSKEHPYDASKDSILQRVRNMLGTA 128

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A6T6C1E1_9RHOD (V-type proton ATPase subunit F n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C1E1_9RHOD)

HSP 1 Score: 140 bits (353), Expect = 3.560e-40
Identity = 75/118 (63.56%), Postives = 86/118 (72.88%), Query Frame = 0

Query:   37 KSRDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGSA 154
            ++R  G LIAVIGDEDT                G+NF VVD K T ++AI EAF  FT RED+AILLINQ+IA+KIR  V KF  PVPA++EIPSKEHPYDPSKDS+LQRVRGMLGSA
Sbjct:   10 RNRPDGHLIAVIGDEDTVTGFLLAGVGQVDGASGTNFVVVDSK-TSIEAIGEAFGTFTSREDVAILLINQHIANKIRHVVQKFKSPVPAIVEIPSKEHPYDPSKDSVLQRVRGMLGSA 126

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A5J4Z0W5_PORPP (V-type proton ATPase subunit F n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0W5_PORPP)

HSP 1 Score: 137 bits (344), Expect = 7.770e-39
Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 0

Query:   38 SRDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGS 153
            +R+ G+L+AVIGDEDT                 SN+FVV  KETP+QAIEEAF  FT R+DIAI+LINQ+IA++IR  V  F  PVPA+LEIPSKEHPY PSKDSILQRVR MLG+
Sbjct:    8 NREGGYLVAVIGDEDTVTGFLMAGVGKKDAKQ-SNYFVVSSKETPLQAIEEAFIGFTNRDDIAIILINQFIANQIRHVVNNFQKPVPAILEIPSKEHPYQPSKDSILQRVRNMLGN 122

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A7S0BLT2_9RHOD (V-type proton ATPase subunit F n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLT2_9RHOD)

HSP 1 Score: 127 bits (320), Expect = 3.300e-35
Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 0

Query:   39 RDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGSA 154
            RD  F IAVIGDEDT                 +NFFVVD KET + +IE+AFKRFT   ++A++LINQ IA++IR+ +  F  P+PAVLEIPSKEHPY+ ++D ILQRVRGMLG A
Sbjct:    7 RDKKFYIAVIGDEDTVTGFLLSGIGNIDSSKNANFFVVDLKETSISSIEDAFKRFTRDSNMAVVLINQNIANEIRAEINSFKKPIPAVLEIPSKEHPYNATQDGILQRVRGMLGQA 122

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BLAST of Gcaud7841.t1 vs. uniprot
Match: UPI001E1D5FD7 (V-type proton ATPase subunit F-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5FD7)

HSP 1 Score: 124 bits (312), Expect = 6.440e-34
Identity = 66/114 (57.89%), Postives = 76/114 (66.67%), Query Frame = 0

Query:   40 DTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGS 153
            D  +LIAVIGDEDT                  N+FVVDPK T    IE  F  FT R+DIAI+LINQ+IA++IR  V  F  P PAVLEIPSKEHPYDPSKD+IL+RV+ MLGS
Sbjct:   14 DATYLIAVIGDEDTITGFLLAGVGQNDGVHDPNYFVVDPKTTSDSEIETVFTSFTTRDDIAIVLINQFIANRIRPVVAAFKRPHPAVLEIPSKEHPYDPSKDAILRRVKNMLGS 127

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A8H5G0X4_9AGAR (V-type proton ATPase subunit F n=2 Tax=Agaricaceae TaxID=5339 RepID=A0A8H5G0X4_9AGAR)

HSP 1 Score: 120 bits (302), Expect = 1.620e-32
Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 0

Query:   36 YKSRDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLG 152
            YK R+   LIAVIGDED+                  NF VVDPK TPV  IE +F+ FTER+DIAILLINQ+IA+KIR T+ K++   PA++EIPSK+HPYDPSKDS+L+RV+ + G
Sbjct:    7 YKDRN---LIAVIGDEDSITGLLLAGIGHVSDNQKKNFLVVDPK-TPVATIESSFQDFTERKDIAILLINQHIAEKIRPTIDKYNQAFPALVEIPSKDHPYDPSKDSVLKRVQKLFG 119

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BLAST of Gcaud7841.t1 vs. uniprot
Match: D8PUM0_SCHCM (V-type proton ATPase subunit F n=2 Tax=Agaricales TaxID=5338 RepID=D8PUM0_SCHCM)

HSP 1 Score: 119 bits (297), Expect = 9.520e-32
Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 0

Query:   44 LIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLGSA 154
            LIAVIGDED+                  NF +VD K T V AIE AF+ FTER+DIAILLINQ++A+KIR TV K+    PA+LEIPSK+HPYDPSKDSIL+RV+ + G A
Sbjct:   12 LIAVIGDEDSITGLLLAGVGHINEQQKKNFLIVDAK-TQVSAIEAAFQEFTERKDIAILLINQHVAEKIRPTVDKYQQAFPALLEIPSKDHPYDPSKDSILKRVQKLFGDA 121

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A067N936_9AGAM (V-type proton ATPase subunit F n=2 Tax=Agaricomycetes TaxID=155619 RepID=A0A067N936_9AGAM)

HSP 1 Score: 118 bits (295), Expect = 1.860e-31
Identity = 66/117 (56.41%), Postives = 79/117 (67.52%), Query Frame = 0

Query:   36 YKSRDTGFLIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLG 152
            ++ RD   L+AVIGDED+                  NF VVD K T V AIE AF+ FTER DIAILLINQ+IA+KIR TV K+    PA+LEIPSK+HPYDPSKDSIL+RV+ + G
Sbjct:    7 FRDRD---LLAVIGDEDSITGLLLAGIGHINDKQRKNFLVVDSK-TQVSAIESAFEEFTERSDIAILLINQHIAEKIRPTVDKYQQAFPALLEIPSKDHPYDPSKDSILKRVQKLFG 119

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BLAST of Gcaud7841.t1 vs. uniprot
Match: A0A0C2XP94_AMAMK (V-type proton ATPase subunit F n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2XP94_AMAMK)

HSP 1 Score: 117 bits (292), Expect = 5.290e-31
Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 0

Query:   44 LIAVIGDEDTTXXXXXXXXXXXXXXXGSNFFVVDPKETPVQAIEEAFKRFTEREDIAILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGMLG 152
            LIAVIGDED+                  NF +VD K T + AIE AF+ FTER+DIAI+LINQ+IA+KIR TV ++    PAVLEIPSKEHPYDPSKDSIL+RV+ ++G
Sbjct:   12 LIAVIGDEDSITGLLLAGVGQVNAQQQKNFLIVDGK-TQISAIEAAFQEFTERKDIAIVLINQHIAEKIRPTVDRYRQAFPAVLEIPSKEHPYDPSKDSILKRVQKLVG 119

The following BLAST results are available for this feature:

BLAST of Gcaud7841.t1 vs. uniprot

BLAST of Gcaud7841.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IZ55_9FLOR	3.070e-55	77.12	V-type proton ATPase subunit F n=1 Tax=Gracilariop...	[more]
A0A1X6P7U4_PORUM	2.450e-43	65.83	V-type proton ATPase subunit F n=1 Tax=Porphyra um...	[more]
A0A6T6C1E1_9RHOD	3.560e-40	63.56	V-type proton ATPase subunit F n=1 Tax=Compsopogon...	[more]
A0A5J4Z0W5_PORPP	7.770e-39	62.07	V-type proton ATPase subunit F n=1 Tax=Porphyridiu...	[more]
A0A7S0BLT2_9RHOD	3.300e-35	56.03	V-type proton ATPase subunit F n=1 Tax=Rhodosorus ...	[more]
UPI001E1D5FD7	6.440e-34	57.89	V-type proton ATPase subunit F-like n=1 Tax=Mercen...	[more]
A0A8H5G0X4_9AGAR	1.620e-32	55.56	V-type proton ATPase subunit F n=2 Tax=Agaricaceae...	[more]
D8PUM0_SCHCM	9.520e-32	57.66	V-type proton ATPase subunit F n=2 Tax=Agaricales ...	[more]
A0A067N936_9AGAM	1.860e-31	56.41	V-type proton ATPase subunit F n=2 Tax=Agaricomyce...	[more]
A0A0C2XP94_AMAMK	5.290e-31	57.80	V-type proton ATPase subunit F n=1 Tax=Amanita mus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008218	ATPase, V1 complex, subunit F	PFAM	PF01990	ATP-synt_F	coord: 45..147 e-value: 4.2E-32 score: 110.3
IPR036906	ATPase, V1 complex, subunit F superfamily	GENE3D	3.40.50.10580	ATPase, V1 complex, subunit F	coord: 39..153 e-value: 8.3E-46 score: 156.9
IPR036906	ATPase, V1 complex, subunit F superfamily	SUPERFAMILY	159468	AtpF-like	coord: 45..153
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	TIGRFAM	TIGR01101	TIGR01101	coord: 41..152 e-value: 8.6E-48 score: 159.6
None	No IPR available	PANTHER	PTHR13861:SF2	V-TYPE PROTON ATPASE SUBUNIT F	coord: 41..152
None	No IPR available	PANTHER	PTHR13861	VACUOLAR ATP SYNTHASE SUBUNIT F	coord: 41..152

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_647_length_20364_cov_4.929216	contig	NODE_647_length_20364_cov_4.929216:3023..4519 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7841.t1	Gcaud7841.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_647_length_20364_cov_4.929216 3023..4519 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7841.t1 ID=Gcaud7841.t1|Name=Gcaud7841.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=155bp
MVRLTDCGYARRRATERPVRDEKRDAAVGEAEVKIYKSRDTGFLIAVIGD
EDTTTGFLLAGIGDNQPSTGSNFFVVDPKETPVQAIEEAFKRFTEREDIA
ILLINQYIADKIRSTVTKFSMPVPAVLEIPSKEHPYDPSKDSILQRVRGM
LGSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008218	ATPase_V1-cplx_f_g_su
IPR036906	ATPase_V1_fsu_sf
IPR005772	ATPase_V1-cplx_fsu_euk