Gcaud1199.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1199.t1
Unique NameGcaud1199.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length157
Homology
BLAST of Gcaud1199.t1 vs. uniprot
Match: S0F3J6_CHOCR (Peptidylprolyl isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3J6_CHOCR)

HSP 1 Score: 166 bits (420), Expect = 1.460e-49
Identity = 76/117 (64.96%), Postives = 98/117 (83.76%), Query Frame = 0
Query:   40 DDKPIVESTSIVTVHYTLGTTGARNGWRIDSTYEREPFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRVYEPDVVMDVTVLRVR 156
            D +P+ E T  V+VHYTLGTTGARNGW+IDS+Y+R+P TF +G  +V+ G+ EGVLGM  GGKRR++IPS +GYR+  D+PV  GFAE+QRFKNIYLNPDR Y+PD+V+DVTV++VR
Sbjct:   67 DARPVTEGTR-VSVHYTLGTTGARNGWKIDSSYDRDPLTFTVGRGEVVQGLDEGVLGMGKGGKRRVVIPSKLGYRTKDDRPVVMGFAEYQRFKNIYLNPDRPYKPDLVIDVTVVKVR 182          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A1Q9DYF5_SYMMI (Peptidylprolyl isomerase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DYF5_SYMMI)

HSP 1 Score: 117 bits (294), Expect = 7.310e-30
Identity = 55/101 (54.46%), Postives = 75/101 (74.26%), Query Frame = 0
Query:   51 VTVHYTLGTTGARNGWRIDSTYERE-PFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRVYEPDVVMDV 150
            VT+ Y + TTGAR G +IDST +R+ P++F +G   +ISG+ E V  M  GG RR++IP S+G+     QP+P  FAEFQRF+NIYLNP+RVY+PD+V+DV
Sbjct:  132 VTIDYVMMTTGARYGTKIDSTKDRDQPYSFVLGDPSIISGLSEAVSTMQPGGIRRVIIPQSLGFTDESKQPIPPNFAEFQRFRNIYLNPNRVYQPDLVLDV 232          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A813JII3_POLGL (Peptidylprolyl isomerase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JII3_POLGL)

HSP 1 Score: 106 bits (265), Expect = 9.680e-26
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   49 SIVTVHYTLGTTGARNGWRIDSTYERE-PFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRVYEPDVVMDV 150
            S VT+ Y + TTGAR G +IDST +RE P+ F +G   +I G+ E +L M  GG RR++IP+ +GY     +P P G  EFQRFKNIYLN +R Y+PD+VMD+
Sbjct:  112 SKVTLDYVMMTTGARYGNKIDSTKDREAPYRFVLGDPSIIRGLSEALLTMKPGGVRRVIIPAKLGYTDESKKPQPPGPGEFQRFKNIYLNSNRAYQPDLVMDL 214          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A7S2V217_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V217_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 7.930e-20
Identity = 51/128 (39.84%), Postives = 72/128 (56.25%), Query Frame = 0
Query:   49 SIVTVHYTLGTTGARNGWRIDSTYERE-PFTFRMGTRDVISGMQEGVLG------MHVGGKRRLLIPSSIGYRSAKDQ-------------------PVPKGFAEFQRFKNIYLNPDRVYEPDVVMDV 150
            S V++ Y++ TTGAR G +I ST ++  PF F +G    I G+++ ++G      M  GG RR++IPSS+GY S                       PVP  F E+QRFKNIY N +R Y+PD+VMD+
Sbjct:   82 SSVSIDYSMSTTGARYGTKIYSTQDKNTPFRFTIGDGTAIKGLEQAIIGGDGVPAMQPGGIRRVIIPSSLGYESLAKPIPGMQYQDCQEGKGVGPIPPVPAAFEEYQRFKNIYCNANRPYQPDLVMDI 209          
BLAST of Gcaud1199.t1 vs. uniprot
Match: K0QYZ8_THAOC (Peptidylprolyl isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QYZ8_THAOC)

HSP 1 Score: 86.7 bits (213), Expect = 4.360e-19
Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   57 LGTTGARNGWRIDSTYER-EPFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQ----------------PVPKGFAEFQRFKNIYLNPDRVYEPDVVMDV 150
            + TTGAR G +I ST +   P+ +++G    I G++E V+GM  GG RR++IPS + Y+S   +                 +P+   EFQRFKNIY NPDR Y PDVV+DV
Sbjct:    1 MSTTGARYGSKIYSTQDAGAPYRWKLGDGSTIPGLEETVMGMKPGGIRRVVIPSKLAYQSGSGRVQDECAEGKGLGPIPPALPESIGEFQRFKNIYCNPDRQYYPDVVLDV 111          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A7S2I6Z6_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6Z6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.180e-17
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0
Query:   53 VHYTLGTTGARNGWRIDSTYER-EPFTFRMGTRDVISGMQEGVLG------MHVGGKRRLLIPSSIGYRSAKDQPVPK--------------------GFAEFQRFKNIYLNPDRVYEPDVVMDV 150
            + Y + TTGAR G +IDST +R  P+ + +G    I+G+++ VLG      M  GG RR++IPS +GY S   +P+P                      FAE+QRFKNIY N +R Y+PD+V+DV
Sbjct:  106 IDYVMSTTGARYGTKIDSTTDRGAPYRWTLGDGTTIAGLEQAVLGGGGVPPMLPGGIRRVVIPSKLGYESLA-RPIPGMQFQDCEEGRGVGPIPPTDVAFAEYQRFKNIYCNANRPYQPDLVLDV 229          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A448YUL1_9STRA (Peptidylprolyl isomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUL1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 5.520e-17
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 0
Query:   52 TVHYTLGTTGARNGWRIDSTYERE-PFTFRMGTRDVISGMQEGVLG-------MHVGGKRRLLIPSSIGY-RSAKDQ-----------PVP---KGFAEFQRFKNIYLNPDRVYEPDVVMDV 150
            T+ Y + TTGAR G +I ST + + P+ + +G    I+G+++ +LG       M  GG RR++IP S+GY + A D            P+P   + F E+QRFKNIY N +R Y+PD+VMDV
Sbjct:   95 TIDYVMSTTGARYGTKIYSTXDVDRPYRWNLGDGSTIAGIEQAILGDGESLTPMRPGGIRRIVIPQSLGYAKLAADSRTLCVENGAPGPIPPPKEAFEEYQRFKNIYCNNERQYQPDIVMDV 216          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A199V318_ANACO (Peptidylprolyl isomerase n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199V318_ANACO)

HSP 1 Score: 84.0 bits (206), Expect = 5.730e-17
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   51 VTVHYTLGTTGARNGWRIDSTYERE-------PFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRVYEPD------VVMDVTVLRVR 156
            V +HY  G   A+ GWR DSTYE +       PF F +G+  VISG++E V  M VGG RR++IP S GY++   +P+P  F + QR      NP R+   +      ++ D+ +L VR
Sbjct:  105 VAIHY-YGRLAAKQGWRFDSTYEHKDAMGEPVPFVFVVGSGKVISGIEEAVKSMRVGGVRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELLSVR 222          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A6D2KK09_9BRAS (Peptidylprolyl isomerase n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KK09_9BRAS)

HSP 1 Score: 82.4 bits (202), Expect = 5.890e-17
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 0
Query:   44 IVESTSIVTVHYTLGTTGARNGWRIDSTYERE-------PFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRV 141
            I  S S + +HY  G   A+ GWR DSTY+ +       PFTF +G+ +VISG++  V  M VGG RR++IP S GY++   +P+P  F + QR      NP R+
Sbjct:   32 ISASRSCIAIHY-YGRLAAKQGWRFDSTYDHKDSTGESVPFTFILGSSNVISGIKTAVRSMKVGGIRRVIIPPSQGYQNTTQEPLPPNFFDRQRLFTTIFNPTRL 135          
BLAST of Gcaud1199.t1 vs. uniprot
Match: A0A059C4R6_EUCGR (Peptidylprolyl isomerase n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C4R6_EUCGR)

HSP 1 Score: 84.0 bits (206), Expect = 6.760e-17
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   51 VTVHYTLGTTGARNGWRIDSTYERE-------PFTFRMGTRDVISGMQEGVLGMHVGGKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRV 141
            V +HY  G   A+ GWR DSTY+ +       PF F++G+ +VISG+Q  V  M VGG RR++IP S GY+S   +P+P  F + QR      NP R+
Sbjct:  114 VAIHY-YGRLAAKQGWRFDSTYDHKDSTGDSVPFVFKLGSENVISGIQAAVRSMKVGGIRRVVIPPSQGYQSTSQEPIPPNFFDRQRLFTTIFNPTRL 210          
The following BLAST results are available for this feature:
BLAST of Gcaud1199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
S0F3J6_CHOCR1.460e-4964.96Peptidylprolyl isomerase n=1 Tax=Chondrus crispus ... [more]
A0A1Q9DYF5_SYMMI7.310e-3054.46Peptidylprolyl isomerase n=1 Tax=Symbiodinium micr... [more]
A0A813JII3_POLGL9.680e-2651.46Peptidylprolyl isomerase n=1 Tax=Polarella glacial... [more]
A0A7S2V217_9STRA7.930e-2039.84Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japoni... [more]
K0QYZ8_THAOC4.360e-1942.34Peptidylprolyl isomerase n=1 Tax=Thalassiosira oce... [more]
A0A7S2I6Z6_9STRA5.180e-1740.00Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A448YUL1_9STRA5.520e-1740.16Peptidylprolyl isomerase n=1 Tax=Pseudo-nitzschia ... [more]
A0A199V318_ANACO5.730e-1738.66Peptidylprolyl isomerase n=2 Tax=Ananas comosus Ta... [more]
A0A6D2KK09_9BRAS5.890e-1740.95Peptidylprolyl isomerase n=1 Tax=Microthlaspi erra... [more]
A0A059C4R6_EUCGR6.760e-1742.86Peptidylprolyl isomerase n=3 Tax=Eucalyptus grandi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 34..156
e-value: 6.1E-21
score: 76.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 42..122
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 45..120
e-value: 5.4E-16
score: 58.7
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 48..113
score: 14.333693
IPR044197Peptidyl-prolyl cis-trans isomerase FKBP17-1-likePANTHERPTHR47860PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTICcoord: 50..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_630_length_20618_cov_4.294685contigNODE_630_length_20618_cov_4.294685:14605..15157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1199.t1Gcaud1199.t1Gracilaria caudata M_176_S67 malemRNANODE_630_length_20618_cov_4.294685 14605..15157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1199.t1 ID=Gcaud1199.t1|Name=Gcaud1199.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=157bp
LDRDEDRKSARSKHTDEKKGISSRLGFDDAPGISIAGCEDDKPIVESTSI
VTVHYTLGTTGARNGWRIDSTYEREPFTFRMGTRDVISGMQEGVLGMHVG
GKRRLLIPSSIGYRSAKDQPVPKGFAEFQRFKNIYLNPDRVYEPDVVMDV
TVLRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR044197FKBP17-1-like