Gcaud2141.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2141.t1
Unique NameGcaud2141.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length388
Homology
BLAST of Gcaud2141.t1 vs. uniprot
Match: A0A2V3IH98_9FLOR (30S ribosomal protein S1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH98_9FLOR)

HSP 1 Score: 592 bits (1526), Expect = 2.940e-211
Identity = 296/356 (83.15%), Postives = 333/356 (93.54%), Query Frame = 0
Query:   32 TRMVVIARAPKTENLSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGVDPVPAKAA 387
            TRMV  ARAP  +++SRF+RM+ +FG P VSEEKSGFTY+DFE+A++ FDY FENGDIC+GRV QYERNGALVDIGAKASA+CPL EMSM +VE+ E A+TIGEDREFQ+ISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTV A ++++NRGGSLV +EGLRAFLPSSHTS+R PREEL+G+ELPLKFLEV +EKGRLVVSHRRA+VEKQMTNLVAGEVVEGV+RG+KPYGAF+DIGGVSGLLHVSQISHDHVGDI A++PDG V+KCMIINQDKEKGRISLSTKTLEPEPGDMLRD+ MVYE+AEEMAARYHKRLEEERKAAADVADDIVSTLD+ SLDD+GVDPVPA+AA
Sbjct:    2 TRMVFTARAPSKDSISRFERMRQRFGVPAVSEEKSGFTYSDFEEAIADFDYRFENGDICSGRVYQYERNGALVDIGAKASAFCPLHEMSMIKVEKAEHALTIGEDREFQVISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVLAEVIAVNRGGSLVMIEGLRAFLPSSHTSIRTPREELIGVELPLKFLEVSAEKGRLVVSHRRAVVEKQMTNLVAGEVVEGVIRGVKPYGAFVDIGGVSGLLHVSQISHDHVGDIPAVVPDGTVVKCMIINQDKEKGRISLSTKTLEPEPGDMLRDAAMVYERAEEMAARYHKRLEEERKAAADVADDIVSTLDIGSLDDIGVDPVPAEAA 357          
BLAST of Gcaud2141.t1 vs. uniprot
Match: R7QL07_CHOCR (30S ribosomal protein S1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL07_CHOCR)

HSP 1 Score: 578 bits (1489), Expect = 3.920e-205
Identity = 299/389 (76.86%), Postives = 344/389 (88.43%), Query Frame = 0
Query:    1 MAFVSSFLGVAVAPPQSSSKARR-CSRASPLPTRMVVIARAPKT-ENLSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGVDPVPAKAA 387
            MAFV+SF G+  A  +++  +R+ CSR S  PTRMV  AR P + +++S+FDRM+ K+G   V  + SGFTY DFE A+S+FDYSFE GDIC+GRV QYE NGAL+DIGAKASAYCP++EMSM RV++PE A+TIGEDREFQIISREDANGQLK+SIRRIEF RAWERVAQLQAEDVTVHA ++S+NRGG LV +EGLRAFLP SH S+R PRE+LVG+ELPLKFLEVD+EK RLVVSHRRA+VEKQMTNLVAGE+V+GVVRGIKPYGAF+DIGG+SGLLHVSQISHDHV DIGA++ DG+ IKCMIINQDKEKGRISLSTKTLEPEPGDM+RDS  VYEKA+EMAARYHKRLEEERKAAADVADDIVSTLDMASLDD+GVDPV  +AA
Sbjct:    1 MAFVNSFYGLPFASNRANPVSRKSCSRLS-YPTRMVATARPPASNQSMSKFDRMRDKYGLKRVQPKNSGFTYEDFETAISEFDYSFEEGDICSGRVFQYEPNGALIDIGAKASAYCPVAEMSMIRVDKPEQALTIGEDREFQIISREDANGQLKLSIRRIEFGRAWERVAQLQAEDVTVHAEVISVNRGGCLVMIEGLRAFLPGSHISLRTPREDLVGVELPLKFLEVDTEKNRLVVSHRRAVVEKQMTNLVAGEIVKGVVRGIKPYGAFVDIGGISGLLHVSQISHDHVADIGAVVQDGSEIKCMIINQDKEKGRISLSTKTLEPEPGDMIRDSAFVYEKADEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDLGVDPVATEAA 388          
BLAST of Gcaud2141.t1 vs. uniprot
Match: UPI001E1D3BAF (LOW QUALITY PROTEIN: 30S ribosomal protein S1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BAF)

HSP 1 Score: 498 bits (1283), Expect = 2.180e-173
Identity = 245/342 (71.64%), Postives = 295/342 (86.26%), Query Frame = 0
Query:   46 LSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGVDPVPAKAA 387
            +++FDRM+LKFG P   E K+GF+Y +F  AMS FDY+F++GD C GRV QYE NGALVDIGAKASAYCPL EMSM+R+++PE A+ IGEDREFQIIS ED+NGQL+VSIRR+EF  AWERVAQLQAEDVTV A ++ +NRGG LV VEGLRAFLP SH ++R PRE++VG+ELPLKFLEVD+ K RLVVSHRRA+VE+Q+T LV G++++GVVRG+KPYGAFID+ GVSGLLH+SQISHDH+ DI A+L +G  IKCM++ QDKEKGRISLSTKTLEPEPGD +RD +MV+++A+EM ARYH RLEEERKAAADVADDIVST DMASLDD+ +DPV A  A
Sbjct:   73 MTKFDRMRLKFGLPTPEEAKTGFSYDEFANAMSDFDYNFKDGDRCVGRVYQYEPNGALVDIGAKASAYCPLPEMSMHRLDKPERALDIGEDREFQIISNEDSNGQLRVSIRRLEFTLAWERVAQLQAEDVTVXAEVVQVNRGGCLVLVEGLRAFLPGSHMAMRNPREDMVGVELPLKFLEVDAAKNRLVVSHRRAMVERQITALVTGQIIQGVVRGVKPYGAFIDLNGVSGLLHISQISHDHISDISAVLKEGTEIKCMVLQQDKEKGRISLSTKTLEPEPGDFIRDPQMVFDRADEMCARYHARLEEERKAAADVADDIVSTXDMASLDDLAIDPVDAPMA 414          
BLAST of Gcaud2141.t1 vs. uniprot
Match: A0A7S1TIC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIC8_9RHOD)

HSP 1 Score: 422 bits (1084), Expect = 2.830e-143
Identity = 212/334 (63.47%), Postives = 270/334 (80.84%), Query Frame = 0
Query:   46 LSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGV 379
            +++FD+M+LKFG      E SGF+Y DFEQ M K++ SF   D+C+G+V   E+ GALVDIGAKASA+ PLSEM+++  +  ED + +G++R+FQIIS ED NGQL +S +R+EFARAWER+AQ+Q+EDVTV A I S+NRGG++V VE LR F+P SH S     EE +G E+ LKFLEVD EKGR+V+S RRA+VE+QMT+L  G V+EG V+ IKPYGAF+D+GG+SGLLH+SQISHDHV +I   L  G  IKCMIINQDKEKGRISLSTKTLEPEPGDML++ ++VYEKAEEMA RYHK+ EEE+KAAADVA+DIV++LDMASL+D+ +
Sbjct:   62 MTKFDKMRLKFGFAKGKVEDSGFSYDDFEQEMGKYERSFVIDDVCSGKVYAVEQTGALVDIGAKASAFLPLSEMAIHPPDAIEDLLQVGDERDFQIISSEDKNGQLTISCKRLEFARAWERLAQMQSEDVTVRATITSVNRGGAMVEVENLRGFVPGSHMSSTANAEEKIGSEIRLKFLEVDQEKGRVVMSERRALVEQQMTDLAPGVVMEGTVKSIKPYGAFVDVGGMSGLLHISQISHDHVDNIEKSLIIGMSIKCMIINQDKEKGRISLSTKTLEPEPGDMLKNPQLVYEKAEEMAERYHKKREEEKKAAADVAEDIVASLDMASLEDLAI 395          
BLAST of Gcaud2141.t1 vs. uniprot
Match: A0A1X6NTC5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTC5_PORUM)

HSP 1 Score: 387 bits (994), Expect = 1.030e-129
Identity = 218/378 (57.67%), Postives = 272/378 (71.96%), Query Frame = 0
Query:    5 SSFLGVAVAPPQSSSKARRCSRASPLPT--RMVVIARAPKTENLSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVR-VPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGV 379
            SSF G A A P S  + RR     P+ T  RM   A  P     ++FDRM+ K+GAP V E K G  Y +FE A+    Y+F  GDI  G V Q + NGA+VD+GAKASA CP  E+S+ +    ED +  G++REFQII  E+A+G+L +SIRRIEF+RAW RVAQL AEDVT+   + S+NRGG LV VEGLRAFLP SH SVR   +E+LVGMELPLK ++VD ++ +LVVSHR A    +MT+L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI A+L  G  +K  ++NQDK+KGRISLSTK LE EPGDM+ DS  V+  AEE+A RYH R+EEER+AA+ VA+DIVS+LD+ASLDD+G+
Sbjct:   16 SSFFG-ARAAPTSDVQVRR-----PVTTGARMQAAAGTP-----TKFDRMRQKWGAPAVDESKGGM-YQEFESALEGLSYNFSEGDIIPGVVQQLDPNGAMVDVGAKASALCPTVEVSIAQGTALEDVLAPGDEREFQIIRSENADGELLLSIRRIEFSRAWARVAQLAAEDVTIMGTVTSVNRGGGLVVVEGLRAFLPGSHISVRRESQEDLVGMELPLKLIQVDPDEKKLVVSHRLAAAASRMTSLETGSVVAGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSAGMEVKAYVMNQDKDKGRISLSTKVLENEPGDMMTDSAAVFAGAEEIAERYHARVEEERRAASSVAEDIVSSLDIASLDDLGL 381          
BLAST of Gcaud2141.t1 vs. uniprot
Match: A0A5J4Z972_PORPP (30S ribosomal protein S1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z972_PORPP)

HSP 1 Score: 386 bits (991), Expect = 1.460e-129
Identity = 197/348 (56.61%), Postives = 259/348 (74.43%), Query Frame = 0
Query:   33 RMVVIARAPKTENLSRFDRMKLKFGA-PDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGV 379
            RMV    A  T    +FD+M+LKFG     ++ +SGF+Y +FE  M  +D     GD+  G V Q +  GA VDIGAKASA+ P  E+S+   ER ED +  GE REF++ S ED NGQL VS+++IEF R WER+AQLQAED+T  A + S+NRGG++V VE LR F+P SH  +    +++VG  LPLKF+EVD EKGR+V+SHRRAIV+ QMT++  G VVEG+VRG+KPYG F+D+ G++GL+H+SQISHD V +   ++   + +KCM+I+QDKEKGRISLSTKTLEPEPGDML+    VY++AEEMA +YHKRLEEERKAAADVADDIVS+LD+A++DD+ +
Sbjct:   34 RMVAAPAAAAT----KFDKMRLKFGVRTPKTQHESGFSYDEFESQMVNYDVKIGMGDLVQGTVVQIDSKGAFVDIGAKASAFLPEEELSIVGAERVEDFIEPGEQREFEVCSTEDVNGQLTVSLKKIEFRRCWERLAQLQAEDITTFATVESVNRGGAMVRVENLRGFIPGSHLGM-ANNQDIVGTNLPLKFIEVDPEKGRVVLSHRRAIVQSQMTDIETGAVVEGIVRGVKPYGIFVDVNGLTGLIHISQISHDRVDNPENVISVNSKVKCMVISQDKEKGRISLSTKTLEPEPGDMLKSPDAVYDRAEEMAEKYHKRLEEERKAAADVADDIVSSLDIANIDDLPI 376          
BLAST of Gcaud2141.t1 vs. uniprot
Match: A0A1X6NLP1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLP1_PORUM)

HSP 1 Score: 378 bits (970), Expect = 5.070e-126
Identity = 209/378 (55.29%), Postives = 269/378 (71.16%), Query Frame = 0
Query:    5 SSFLGVAV--APPQSSSKARRCSRASPLPTRMVVIARAPKTENLSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVR-VPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGV 379
            S+F G A+  APP +++ A    R +P    MV     P     ++FDRM+ K+GAP V E K G  Y +F  A+    Y+F  GDI  G V Q + NGA++D+GAKASA CP  E+S+ +    ED +T+G+ REFQII  E+A+G+L +SIRRIE++RAW RVAQL AEDVT+   + S+NRGG LV VEGLRAFLP SH SVR   +E+LVGMELPLK ++VD  + +LVVSHR A    +MT L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI A+L  G  +K  ++NQ+K+KGRISLSTK LE EPGDM+ D+  V+  A++ AA YH R+EEER AA+ VADDIVS+LD+A+LDD+G+
Sbjct:   19 SAFTGAAISAAPPPAAATAT-ARRGAPT---MVAAVGTP-----TKFDRMRQKWGAPAVDESK-GDMYEEFATALEGISYNFAEGDIIPGVVQQLDPNGAMIDVGAKASAVCPTVEVSIAQGVNLEDVLTLGDQREFQIIRSENADGELMLSIRRIEYSRAWARVAQLAAEDVTISGTVASVNRGGGLVTVEGLRAFLPGSHISVRREQQEDLVGMELPLKLIQVDPAEKKLVVSHRLAAAASRMTTLETGSVVTGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLTPGMEVKAFVMNQEKDKGRISLSTKVLEAEPGDMMTDAAAVFAGADDAAAAYHARVEEERVAASSVADDIVSSLDIATLDDLGL 386          
BLAST of Gcaud2141.t1 vs. uniprot
Match: L1IVV6_GUITC (Ribosomal protein S1, chloroplastic n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IVV6_GUITC)

HSP 1 Score: 368 bits (944), Expect = 3.810e-122
Identity = 192/349 (55.01%), Postives = 260/349 (74.50%), Query Frame = 0
Query:   36 VIARAPKTENLSRFDRMKLKFGAPD----VSEEK------SGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASL 374
            ++A AP     S+F++M+ K+G P     +S+E       +GF Y+DFE A++KFD +F+ GD+  G+V Q+E+ GALVDIG K+SAY   +E SM RV+  E  ++I ++REFQIIS ED NGQ+++SIR++EFARAWERV Q+QAED T+ A I+SINRGG+L++ EGLR FLP SH    +  E+ VG  +PLKFLEVD  K RLVVS+RRA+VE ++ NL  G++V G+VR IKPYGAF+DIGG+SGLLH+SQISHDH+ D+  +L +G  IK MI+ QDK+KGR SLSTKTLE EPGDM+R+ +MV E AEE A RYH+RL+ E++A    A ++V+ LD+ +L
Sbjct:   54 MVATAPT----SKFEKMRFKYGKPSLERGISQEMKDAQKIAGFDYSDFESAIAKFDNTFQVGDVVVGQVVQFEQGGALVDIGGKSSAYLGAAEASMQRVDDIEMFLSIADNREFQIISGEDENGQVRLSIRKLEFARAWERVRQIQAEDCTIMAEILSINRGGALINFEGLRGFLPGSHAPQGMT-EDTVGTMIPLKFLEVDQAKNRLVVSNRRAVVETKLVNLEPGQLVTGIVRSIKPYGAFVDIGGISGLLHISQISHDHISDVSKVLQEGQEIKAMILTQDKDKGRFSLSTKTLEAEPGDMIRNPEMVKENAEETAKRYHERLQAEQQARDQAASELVAGLDLNAL 397          
BLAST of Gcaud2141.t1 vs. uniprot
Match: M1VII4_CYAM1 (Chloroplast ribosomal protein S1 n=3 Tax=cellular organisms TaxID=131567 RepID=M1VII4_CYAM1)

HSP 1 Score: 359 bits (922), Expect = 3.240e-118
Identity = 187/350 (53.43%), Postives = 250/350 (71.43%), Query Frame = 0
Query:   42 KTENLSRFDRMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPR-----------EELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDVGVD 380
            KT   SRF+RM+ K+G  DVSE ++   Y + +QA+    Y +E   I  GRV  +E  GAL+D+GAK +AY PLSE++M+RV  PE+ + IGE+R+FQII+ ED  GQL+VSI+RIEF R WE++ Q  A D  V   ++++NRGG+ V ++ LR FLP+SH  V VP            E+L+G ELP+K LEVD EK RLVVSHRRA+ EK + N+  G ++EG VRGIKPYG FI+ GGVSGLLH+SQISH+HV D+ ++   G  +K ++++QD+EKGR+SLSTK LEPEPGDMLR  + V+E+AEEMAARY +R+ EE +A A+ A DIV+ LD+ASL   GVD
Sbjct:   74 KTRAPSRFERMRAKYGLSDVSEPEAAPAYKELDQAVQNLSYKYELNMIVKGRVVHFEPRGALIDVGAKTAAYLPLSEVAMDRVSSPEEVLKIGEERDFQIIATEDTEGQLRVSIKRIEFTRTWEKLQQALANDEVVQCEVVAVNRGGASVRIDCLRGFLPASHI-VLVPGFIPGLPSDPRLEDLMGKELPVKLLEVDPEKSRLVVSHRRALAEKSLKNVETGTILEGTVRGIKPYGVFIESGGVSGLLHISQISHEHVEDLTSVFTLGDKVKALVVSQDREKGRVSLSTKVLEPEPGDMLRSPQTVFERAEEMAARYRERIAEEERARAEYASDIVAGLDVASL---GVD 419          
BLAST of Gcaud2141.t1 vs. uniprot
Match: A0A7S4QHK0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHK0_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.310e-116
Identity = 181/341 (53.08%), Postives = 244/341 (71.55%), Query Frame = 0
Query:   41 PKTENLSRFDRMKLKFGAPDVSEEKSG--FTYTDFEQAMSKFDYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLSEMS--MNRVERPEDAVTIGEDREFQIISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFLPSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDV 377
            PK   LSRFDR+K  +  P + +   G  F+Y DF+ A+   DY+F   D+  G V QY+  G +VDIGAKASA+ P +E S  MN+ +  ED + + E+R FQIIS ED NGQL VS+RRI++  AW+ V    AED    A ++ +NRGG++  V+GLRAFLP SH + ++P E+L+G  LPLKFLEV+ E  +LVVS+RRA+VE+QM++L  G+++ G+V+ +KPYGAF+++GG+SGLLH+SQIS+D + D+  +L  G  +KCMII+ DK  GRI+LSTKTLEPEPGDMLRD K V+E AEE AARYH+R+E ERKA  + A DIV  L   SLDD+
Sbjct:   89 PKAPQLSRFDRLKAAYKGPQIVKNDEGLDFSYDDFDSAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPTAEASLIMNQGDDIEDLINVDEERNFQIISEEDENGQLLVSVRRIQYREAWDTVIAKNAEDGVFEATVVGVNRGGAICLVDGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMSDLSRGDIITGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGTQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPKRVFEMAEETAARYHERMEAERKAREEAAKDIVLGLGD-SLDDL 428          
The following BLAST results are available for this feature:
BLAST of Gcaud2141.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH98_9FLOR2.940e-21183.1530S ribosomal protein S1 n=1 Tax=Gracilariopsis ch... [more]
R7QL07_CHOCR3.920e-20576.8630S ribosomal protein S1 n=1 Tax=Chondrus crispus ... [more]
UPI001E1D3BAF2.180e-17371.64LOW QUALITY PROTEIN: 30S ribosomal protein S1-like... [more]
A0A7S1TIC8_9RHOD2.830e-14363.47Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NTC5_PORUM1.030e-12957.67Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z972_PORPP1.460e-12956.6130S ribosomal protein S1 n=1 Tax=Porphyridium purp... [more]
A0A1X6NLP1_PORUM5.070e-12655.29Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
L1IVV6_GUITC3.810e-12255.01Ribosomal protein S1, chloroplastic n=2 Tax=Gemini... [more]
M1VII4_CYAM13.240e-11853.43Chloroplast ribosomal protein S1 n=3 Tax=cellular ... [more]
A0A7S4QHK0_9STRA1.310e-11653.08Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 337..357
NoneNo IPR availableGENE3D2.40.50.140coord: 70..168
e-value: 3.0E-18
score: 67.4
coord: 169..248
e-value: 5.2E-7
score: 31.4
NoneNo IPR availableGENE3D2.40.50.140coord: 249..328
e-value: 3.5E-21
score: 76.9
NoneNo IPR availablePANTHERPTHR10724:SF1130S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 64..361
NoneNo IPR availablePANTHERPTHR1072430S RIBOSOMAL PROTEIN S1coord: 64..361
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableCDDcd05687S1_RPS1_repeat_ec1_hs1coord: 87..156
e-value: 1.54853E-15
score: 68.7099
NoneNo IPR availableCDDcd04465S1_RPS1_repeat_ec2_hs2coord: 174..238
e-value: 3.46165E-18
score: 75.9583
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 85..156
e-value: 2.3E-13
score: 60.4
coord: 250..320
e-value: 1.4E-21
score: 87.7
coord: 172..238
e-value: 9.2E-7
score: 38.5
IPR003029S1 domainPFAMPF00575S1coord: 174..238
e-value: 3.1E-6
score: 27.4
coord: 251..320
e-value: 1.2E-13
score: 51.2
coord: 84..156
e-value: 2.2E-11
score: 44.0
IPR003029S1 domainPROSITEPS50126S1coord: 252..320
score: 20.021137
IPR003029S1 domainPROSITEPS50126S1coord: 87..156
score: 16.826338
IPR003029S1 domainPROSITEPS50126S1coord: 174..238
score: 11.921642
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 251..331
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 77..181
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 170..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_116_length_48691_cov_4.274671contigNODE_116_length_48691_cov_4.274671:28143..29306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2141.t1Gcaud2141.t1Gracilaria caudata M_176_S67 malemRNANODE_116_length_48691_cov_4.274671 28143..29306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2141.t1 ID=Gcaud2141.t1|Name=Gcaud2141.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=388bp
MAFVSSFLGVAVAPPQSSSKARRCSRASPLPTRMVVIARAPKTENLSRFD
RMKLKFGAPDVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQYERN
GALVDIGAKASAYCPLSEMSMNRVERPEDAVTIGEDREFQIISREDANGQ
LKVSIRRIEFARAWERVAQLQAEDVTVHAVIMSINRGGSLVHVEGLRAFL
PSSHTSVRVPREELVGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTNLV
AGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAILPDGAV
IKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEKAEEMAARYHKR
LEEERKAAADVADDIVSTLDMASLDDVGVDPVPAKAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold