Gcaud8720.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8720.t1
Unique NameGcaud8720.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length495
Homology
BLAST of Gcaud8720.t1 vs. uniprot
Match: A0A2V3IRI2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRI2_9FLOR)

HSP 1 Score: 556 bits (1432), Expect = 4.210e-193
Identity = 289/495 (58.38%), Postives = 368/495 (74.34%), Query Frame = 0
Query:    1 MWRRFSTAFSPEERLRELKKHILRLYKHIHPDRLGRFPQERKVNEHSFKVLQSAIDRHFDRIQARAEMPPGAPTTVQKLIFYAHEVKNSGSFGTNKLTKAVISLHESRLGNALASLFSELGLEPPPKSILPGTGIYNDGVHFSSLRELVKYARRVELEYLQKKSQETGSVAQRASDDEVLMTRLALQRSRGFTIVLGTGLPVKLERLLRRLSRTVRKLQEVDLRTLVIELDGGFHVEVNTNGYFPFVSLGACATEETWIETLRSEEIRSAAKASQSLVSALHDLETELARALGVRLVMHDIKLVDGADWE-SKSDASKAKGKNLEALLDGTVSLEVYHNLMQSFIELIEKEGVPMFVDGARSLALMFTDGHGFQMDIKQGVLRVGINDGQCKIAETLRAHGQYVSREHEKERSNAEDEQKRLSNVQHALRIPSLRRLKEVSDQDWEMALTELRADASRLRAVLDGTPVVVGMQARLLTDTGEIEIPFDYHQWLPI 494
            M R FS+  +P  +LRELK+H+LRLYKHIHPDRLGRFP++R VNE+SF++LQSAIDRHFDR++AR   PP AP   QKL F+AH          + LTKAVI +HESRLG+AL SLF ELGLEPPP++++P T    +G+ FSSLREL+ YARRVE+E + KK+Q    V QR  DDEV +TRLALQRSRG  IVLGTGLPVKLERL RRLSRT+R  + VDL T VIELDGG  VE+NT+G FPF+ LGACATE+ W+E L SE++R+AAK  Q+  S L + E  LA+ +GVRLVMHD +L+ G  W+ +K DAS     NL+  L G+  L  Y ++++      + +   + VDG  SLALMFT+G GF  D++QGVLRVGI+D   KI ETL+ HG YVS  +E++  +A++E+KRLS V+ AL IPS+RR++EVSD+DW+ ALT+L+ D+ RLR V DGTPVV+G QARLL D+GE+EIP+DY QWLPI
Sbjct:    1 MLRSFSSVPNPHAKLRELKRHVLRLYKHIHPDRLGRFPRQRAVNENSFQILQSAIDRHFDRVEARPSTPPPAPQPAQKLTFFAHGSAGDKKPDRHNLTKAVIHMHESRLGHALVSLFKELGLEPPPQNVIPSTVAGLEGMQFSSLRELIMYARRVEMESITKKNQAAADVVQRRIDDEVAVTRLALQRSRGVQIVLGTGLPVKLERLFRRLSRTIRSARNVDLSTSVIELDGGCEVELNTSGTFPFIKLGACATEDAWVEALASEQVRAAAKTGQAFASELQEKEAALAQTIGVRLVMHDFQLMRGGQWDMNKRDASD----NLDVHLTGSGLLRRYQSVLRCCASSADTDIGVVPVDGISSLALMFTEGSGFHADVEQGVLRVGIDDDIDKIMETLKTHGVYVSSMYERKMIHAQNEEKRLSVVRRALGIPSIRRVEEVSDRDWDTALTKLKNDSGRLREVFDGTPVVIGTQARLLRDSGEVEIPYDYDQWLPI 491          
BLAST of Gcaud8720.t1 vs. uniprot
Match: R7QPR3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPR3_CHOCR)

HSP 1 Score: 391 bits (1005), Expect = 2.730e-128
Identity = 222/504 (44.05%), Postives = 330/504 (65.48%), Query Frame = 0
Query:    6 STAFSPEERLRELKKHILRLYKHIHPDRLGRFPQERKVNEHSFKVLQSAIDRHFDRIQARAE-MPPGAPTTVQKLIFYAHEVKNSGSFGTNK-------LTKAVISLHESRLGNALASLFSELGLEPPPKSILPGTG---IYNDGVHFSSLRELVKYARRVELEYLQKKSQETGSVAQRASDDEVLMTRLALQRSRGFTIVLGTGLP--VKLERLLRRLSRTVRKLQEVDLRTLVIELDGGFHVEVNTNGYFPFVSLGACATEETWIETLRSEEIRSAAKASQSLVSALHDLETELARALGVRLVMHDIKLVDGADWESKSDASK--AKGKNLEALLDGTVSLEVYHNLMQSFIELIEKEGVPMFVDGARSLALMFTDGHGFQMDIKQGVLRVGINDGQCKIAETLRAHGQYVSREHEKERSNAEDEQKRLSNVQHALRIPSLRRLKEVSDQDWEMALTELRADASRLRAVLDGTPVVVGMQARLLTDTGEIEIPFDYHQWLPI 494
            ++A  P++ +RELK+H+ RLYKHIHPDRLG+FPQ RKVNE SF+VLQSAI+RHFDR++AR   +PP A    ++L F+A + K   S G ++       L KAV+  HE+ LG+AL SLF  LGLEPPP++ILPG     +  +G  FSSL EL+++ARRV +  +Q++       A+   DDE+L+TRLALQRSRG  + LG GLP   KL  + RRL+RT+ +++   L  LV+E+DGGF V +NT G +P++ LGACA+ ETW ++L S E+ +A + S   ++ L +LE  +A  LG++LVMH+I ++   + E+K +A +  +  + +E +L  + +L+ Y  L+ S   LI  E     V    S+ALM  +  G Q + +QGV+RVG++ G   +   L +HG+ V    E+ R     E+KR++NV+ A+ I SLRR + VS ++W  AL  +RADA RLR VLDG PVV+G QAR++ ++GE+E+P D+++ + +
Sbjct:    8 TSAREPKDIIRELKRHVHRLYKHIHPDRLGQFPQHRKVNEASFQVLQSAIERHFDRVEARTRNIPPQAFQPPKELTFFA-KAKPKSSKGKHEQNVNDYGLHKAVVPFHETNLGHALHSLFESLGLEPPPQNILPGRRPGPLGQEGQRFSSLTELIRHARRVIMSNVQRQQTGNPRTAESDLDDEMLVTRLALQRSRGLYVTLGAGLPPKAKLVVIFRRLARTLSEVRTKYLSNLVVEMDGGFDVTLNTEGAYPWMQLGACASTETWRDSLSSSEVVAACQKSNKHMTRLRELEARVAIKLGIKLVMHNINVLGIENDETKGEAGREDSNHERMERMLRASAALDSYEQLLLS---LISSEVESRQVREQVSVALMIDESDGVQCEAEQGVIRVGLSTGADAVLSALSSHGRGVHERFEQVRCERVAEEKRVANVKRAVGINSLRRAESVSTREWGEALAHMRADAGRLRGVLDGVPVVIGTQARVIVESGEVEVPHDFYRTIRV 507          
The following BLAST results are available for this feature:
BLAST of Gcaud8720.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRI2_9FLOR4.210e-19358.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPR3_CHOCR2.730e-12844.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
NoneNo IPR availableCOILSCoilCoilcoord: 404..424
NoneNo IPR availablePANTHERPTHR31596:SF1T-CELL ACTIVATION INHIBITOR, MITOCHONDRIALcoord: 237..488
coord: 17..123
IPR027989Domain of unknown function DUF4461PFAMPF14688DUF4461coord: 330..488
e-value: 1.3E-7
score: 31.7
IPR028031Domain of unknown function DUF4460PFAMPF14687DUF4460coord: 16..106
e-value: 3.6E-12
score: 46.3
IPR027986T-cell activation inhibitor, mitochondrialPANTHERPTHR31596T-CELL ACTIVATION INHIBITOR, MITOCHONDRIALcoord: 237..488
coord: 17..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_61_length_58397_cov_4.831458contigNODE_61_length_58397_cov_4.831458:24997..26481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8720.t1Gcaud8720.t1Gracilaria caudata M_176_S67 malemRNANODE_61_length_58397_cov_4.831458 24997..26481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8720.t1 ID=Gcaud8720.t1|Name=Gcaud8720.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=495bp
MWRRFSTAFSPEERLRELKKHILRLYKHIHPDRLGRFPQERKVNEHSFKV
LQSAIDRHFDRIQARAEMPPGAPTTVQKLIFYAHEVKNSGSFGTNKLTKA
VISLHESRLGNALASLFSELGLEPPPKSILPGTGIYNDGVHFSSLRELVK
YARRVELEYLQKKSQETGSVAQRASDDEVLMTRLALQRSRGFTIVLGTGL
PVKLERLLRRLSRTVRKLQEVDLRTLVIELDGGFHVEVNTNGYFPFVSLG
ACATEETWIETLRSEEIRSAAKASQSLVSALHDLETELARALGVRLVMHD
IKLVDGADWESKSDASKAKGKNLEALLDGTVSLEVYHNLMQSFIELIEKE
GVPMFVDGARSLALMFTDGHGFQMDIKQGVLRVGINDGQCKIAETLRAHG
QYVSREHEKERSNAEDEQKRLSNVQHALRIPSLRRLKEVSDQDWEMALTE
LRADASRLRAVLDGTPVVVGMQARLLTDTGEIEIPFDYHQWLPI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027989DUF4461
IPR028031DUF4460
IPR027986TCAIM