Gcaud8726.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8726.t1
Unique NameGcaud8726.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length579
Homology
BLAST of Gcaud8726.t1 vs. uniprot
Match: A0A2V3IRE9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRE9_9FLOR)

HSP 1 Score: 239 bits (610), Expect = 1.450e-71
Identity = 139/246 (56.50%), Postives = 165/246 (67.07%), Query Frame = 0
Query:  335 VSECSPLTLQPDAMPIMQPSGADLKLRLATPLDDAWFLS---PNPATPVNSGSIHRAEYPNDPGFVASNETKHATNISNKLAQPCSVVPQIGPQIEILYPNALRNKSPKAVRCLLRATGDDIVSKIDLYWSHFHDYRASAERAGRLLREKSVRFERRKRMGPEVPAIEKKAIRAQRNRERSQALRRYHKQRMGDLEAVSGQLKLYNSVARSLINCLLEEPQSLELVQEYFGSHECSEELLTYLRSS 577
            V + S   L P+    +QP     K           FL+    N     N G+      P        N    A   S  + QP  V  +    IEIL+P  L   SP+AVR LLR+TGDDIVSKI+LYW+HFHDY  +A+RAG++L+EKSVRFERRKRMGPEV AIEKKAIRAQRNRERSQALRRYHKQRMG+LE V+ +LK +N+VA+SLINCLLEEPQSLELVQEYF +HECSEELLT+LRS+
Sbjct:   11 VPDGSRTALHPEVAAYLQPGSDTAKFSAPLTRQPDLFLNGIYSNAYLDANLGATVSVSDPMGMNVGVLNSPLAAPGSSTHIRQPQFVDTRTS-HIEILHPKGLEGISPQAVRALLRSTGDDIVSKIELYWTHFHDYHITADRAGKVLKEKSVRFERRKRMGPEVTAIEKKAIRAQRNRERSQALRRYHKQRMGELEDVNRKLKTHNAVAKSLINCLLEEPQSLELVQEYFSTHECSEELLTFLRSA 255          
BLAST of Gcaud8726.t1 vs. uniprot
Match: A0A2V3IRF9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRF9_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.770e-10
Identity = 71/268 (26.49%), Postives = 112/268 (41.79%), Query Frame = 0
Query:    1 MDPLFSDLDNGMSPDNTKDFEEMMSKTLELGNLSAQTMSSTLH-----LPGLSECQGDGSSEHATAVENIEVSPYFPPPSPVSPDVSFLALNFDPKDQAEESVNLQEQSEGDADQVHKRIRYP--TQPNSLGNMSPSPHELPLDAFAVGQSNR-----KSIGIRETQETPDAKN--GMILGRELAKYVTEYANRQVYFRAQSQEETPFESNGELFPEKRLHTNQSTQQAVILKRNVLKDENTEHGLQALLQLLSESSGPPRKKAKIDH 254
            + P  S  ++ +  +N   F+E++ ++LEL NLSA  MS+ ++          E + DG+ +    V+ +++ P+FPPPSPVSPD S L L  DP +     +N QE   GD + + K    P  T+  ++       H+  +       S R         +R T E P       M  G  L        +  V   AQ  +      +  +     LH   + Q    +  N     N +  +Q LL LL E+   P KK K+ H
Sbjct:    3 LQPTHSMFNDIIGNNNAVGFDEVVRQSLELSNLSAPDMSTAMNNIFEGTESRHEQENDGTVDCGFRVDKLDIDPFFPPPSPVSPDASLLGLQLDPSNYNHIQINEQECQAGDVNSLSKLYSAPGTTKDRAVTQY----HDETVKNLPRADSQRPPPETNETVVRTTLEAPSNSTTCAMDKGPTLQSDFIACPDPPVNLLAQDLQTL---DSLAIPTVNSLHLTPNPQTCAAINPNPFVTGNEKPDIQQLLLLLRENPHLPYKKQKVGH 263          
The following BLAST results are available for this feature:
BLAST of Gcaud8726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRE9_9FLOR1.450e-7156.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRF9_9FLOR3.770e-1026.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_61_length_58397_cov_4.831458contigNODE_61_length_58397_cov_4.831458:39246..40982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8726.t1Gcaud8726.t1Gracilaria caudata M_176_S67 malemRNANODE_61_length_58397_cov_4.831458 39246..40982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8726.t1 ID=Gcaud8726.t1|Name=Gcaud8726.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=579bp
MDPLFSDLDNGMSPDNTKDFEEMMSKTLELGNLSAQTMSSTLHLPGLSEC
QGDGSSEHATAVENIEVSPYFPPPSPVSPDVSFLALNFDPKDQAEESVNL
QEQSEGDADQVHKRIRYPTQPNSLGNMSPSPHELPLDAFAVGQSNRKSIG
IRETQETPDAKNGMILGRELAKYVTEYANRQVYFRAQSQEETPFESNGEL
FPEKRLHTNQSTQQAVILKRNVLKDENTEHGLQALLQLLSESSGPPRKKA
KIDHRLRYVMEPEFAVHTTNKTVATPGVIDAIAKEFSGKNVSEQQNTAQL
TPQLPNDAWTDLLRTGDKDDMMYNAPAPGAVRRQVSECSPLTLQPDAMPI
MQPSGADLKLRLATPLDDAWFLSPNPATPVNSGSIHRAEYPNDPGFVASN
ETKHATNISNKLAQPCSVVPQIGPQIEILYPNALRNKSPKAVRCLLRATG
DDIVSKIDLYWSHFHDYRASAERAGRLLREKSVRFERRKRMGPEVPAIEK
KAIRAQRNRERSQALRRYHKQRMGDLEAVSGQLKLYNSVARSLINCLLEE
PQSLELVQEYFGSHECSEELLTYLRSSL*
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