Gcaud1978.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1978.t1
Unique NameGcaud1978.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length144
Homology
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A2V3INQ2_9FLOR (Putative Golgi transport protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ2_9FLOR)

HSP 1 Score: 258 bits (659), Expect = 1.880e-85
Identity = 135/143 (94.41%), Postives = 142/143 (99.30%), Query Frame = 0
Query:    1 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYL+GVMMIIGPTRSVRFFFQKRKAKASVFFFTGMA VLFGLP++GMAVELFGFVNLFGDFFPVVIAFLRRAPVFG+LLGLP+VRN+ADRLAGSS+KLPV
Sbjct:   87 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLAGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAVVLFGLPVLGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGRLLGLPIVRNVADRLAGSSSKLPV 229          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A1X6PC43_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC43_PORUM)

HSP 1 Score: 168 bits (426), Expect = 2.660e-51
Identity = 87/135 (64.44%), Postives = 105/135 (77.78%), Query Frame = 0
Query:    9 DVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            D +KIGIGLT+FGLAF +LGV L FDK LLAMG++L+L+GV +IIG  RS RFFFQ++KAK S  FF GM  VL G P+IGM VE+FGF+NLFGDFFP+ IAFLRR P+ G  + LP VR + D+LA S  KLPV
Sbjct:    3 DFKKIGIGLTSFGLAFMILGVLLLFDKALLAMGDLLFLAGVTLIIGVQRSYRFFFQRKKAKGSALFFGGMLLVLVGWPVIGMGVEVFGFINLFGDFFPIAIAFLRRMPIVGNFMTLPGVRVVVDKLAASPPKLPV 137          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A7S2ZZF7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZF7_9RHOD)

HSP 1 Score: 159 bits (401), Expect = 1.690e-47
Identity = 81/137 (59.12%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    7 ITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            I D +KIGIGLTA GL F+ LG+ L FD  L+AMGN+L+LSGV ++IGP RSV FFFQK+K K S+ FF G+A VL   P+IG+ VE FGF+NLFGDFFP+ + FLRR P+ G LL LP + ++ D+   SS KLPV
Sbjct:    2 IQDFKKIGIGLTACGLGFTFLGIILIFDAALIAMGNILFLSGVTLVIGPQRSVTFFFQKKKLKGSIVFFVGIALVLIKWPVIGILVESFGFINLFGDFFPIAVTFLRRLPIIGNLLSLPYISDLVDKFVASS-KLPV 137          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A7S0EAX9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EAX9_9EUKA)

HSP 1 Score: 159 bits (403), Expect = 2.060e-47
Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 0
Query:    6 AITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            A+ D RKIGIGLT  GL F VLG+ +FFDKGLLAMGN+L+L+GVMMIIG  ++ RFFFQKRK K +  F  G+  VL G P+IGM VE FGF+NLFGDFFP+ + FLR  PV G LL LP++R++ DR      +LPV
Sbjct:   30 AMDDYRKIGIGLTGAGLLFMVLGMMMFFDKGLLAMGNILFLAGVMMIIGMNKTFRFFFQKRKLKGTACFLGGIGLVLLGWPVIGMGVEGFGFLNLFGDFFPIALGFLRNMPVVGSLLNLPIIRSVTDRFV-QKARLPV 166          
BLAST of Gcaud1978.t1 vs. uniprot
Match: UPI001F4FD684 (vesicle transport protein GOT1B n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FD684)

HSP 1 Score: 157 bits (398), Expect = 5.290e-47
Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            F ITDV+KIG+GL  FG+AF  LGV L FDKGLLA+GN+L++SG+  +IG  R+ RFFFQ+ K +ASV FF G+  VLFG P++GM +E +GFV LF  FFPV I FLRR PV G +L LP +R I D+LAG S++  V
Sbjct:    2 FEITDVQKIGVGLAGFGIAFLFLGVLLLFDKGLLALGNILFISGLACVIGLERTFRFFFQRHKVRASVAFFAGILVVLFGWPLVGMLIETYGFVLLFSGFFPVAINFLRRVPVLGTVLNLPGIRGIIDKLAGDSSRTMV 140          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A6J1SRK0_FRAOC (vesicle transport protein GOT1B n=2 Tax=Thripinae TaxID=153976 RepID=A0A6J1SRK0_FRAOC)

HSP 1 Score: 156 bits (395), Expect = 1.510e-46
Identity = 82/139 (58.99%), Postives = 102/139 (73.38%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            F I+DV+KIG+GL AFG++F  LGV L FDKGLLA+GN+L++SG+  +IG  R+ RFFFQ+ K KAS+ FF G+A VLFG P+IGM +E +GFV LF  FFPV I FLRR PV G  L  P VR I D+LAG S +  V
Sbjct:    2 FEISDVQKIGVGLAAFGISFLFLGVILIFDKGLLAIGNILFISGLACVIGFERTFRFFFQRHKTKASIAFFGGIAVVLFGWPLIGMCLETYGFVLLFSGFFPVAINFLRRVPVLGTFLNFPGVRGIVDKLAGDSNRTTV 140          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A5J4YNX5_PORPP (Vesicle transport protein GOT1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNX5_PORPP)

HSP 1 Score: 156 bits (395), Expect = 1.660e-46
Identity = 80/140 (57.14%), Postives = 104/140 (74.29%), Query Frame = 0
Query:    1 MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTK 140
            M+ P  I+D +KIGIGLT FG+ F+ LGV L FDK LLAMGNV++LSGV +IIG  R+VRFFF +++ K S FFF GM  VL G P+IG+ +E +GFVNLFGDFFPV + F++  PV G +L +P V+ + DRL G +TK
Sbjct:    1 MAEPM-ISDFKKIGIGLTGFGMGFTFLGVLLLFDKSLLAMGNVMFLSGVGLIIGAQRAVRFFFTRKRYKGSAFFFGGMTLVLVGWPIIGICLEAWGFVNLFGDFFPVALTFMQNMPVIGNILAMPAVQQVVDRLMGLNTK 139          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A507CCU7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CCU7_9FUNG)

HSP 1 Score: 154 bits (389), Expect = 1.160e-45
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 0
Query:    7 ITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            +TD +KIG+GLTAFGL F  LG+ LFFD GLLA+GN+L+L G+ ++IG  ++  FF +K K + +V F  G+  V    PMIGM VELFGFVNLFGDFFPVVI FLRR P  G +L +P V N+ DR+AG  TKLPV
Sbjct:    3 LTDTQKIGVGLTAFGLFFMFLGILLFFDAGLLAIGNILFLGGLTLVIGMAKTATFFMRKNKLRGTVCFLGGILLVFIKWPMIGMVVELFGFVNLFGDFFPVVIGFLRRLPFIGTILAIPAVSNVLDRIAGP-TKLPV 138          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A1S3DJP2_DIACI (vesicle transport protein GOT1B isoform X2 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DJP2_DIACI)

HSP 1 Score: 154 bits (389), Expect = 1.230e-45
Identity = 81/139 (58.27%), Postives = 102/139 (73.38%), Query Frame = 0
Query:    5 FAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            F ITDV+KIG+GL  FG+AF  LGV L FDKGLLA+GNVL++SG+  +IG  R+ RFFFQ+ K K S+ FF G+  VLFG P+IGM +EL+GF +LF  FFPV I FLRR PV G +L LP ++ I DRLAG + +  V
Sbjct:    2 FEITDVQKIGVGLAGFGIAFLFLGVFLLFDKGLLAIGNVLFISGLACVIGFERTFRFFFQRHKVKGSLCFFGGIFVVLFGWPLIGMCIELYGFYHLFSGFFPVAINFLRRIPVLGMMLNLPGIKGILDRLAGDTHRTMV 140          
BLAST of Gcaud1978.t1 vs. uniprot
Match: A0A7S3W5F4_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5F4_9SPIT)

HSP 1 Score: 153 bits (386), Expect = 3.210e-45
Identity = 82/138 (59.42%), Postives = 100/138 (72.46%), Query Frame = 0
Query:    6 AITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVMMIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNLFGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV 143
            A+ D RKIG+GLT  G+ F VLGV LFFDKGLLAMGN+L+L+GV +IIGP    RFFFQKRK + +  F  G+  VL G P+ GMA+ELFGF+NLFGDFFPVV+ FLR  P+ G +L LP VR   DR    + +LPV
Sbjct:    1 AMDDYRKIGLGLTCAGVLFLVLGVMLFFDKGLLAMGNILFLAGVSLIIGPRGVFRFFFQKRKVRGTSCFLGGIFLVLVGWPVFGMAIELFGFLNLFGDFFPVVLGFLRNLPIVGNVLALPPVRAFTDRFVAKA-RLPV 137          
The following BLAST results are available for this feature:
BLAST of Gcaud1978.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ2_9FLOR1.880e-8594.41Putative Golgi transport protein 1 n=1 Tax=Gracila... [more]
A0A1X6PC43_PORUM2.660e-5164.44Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2ZZF7_9RHOD1.690e-4759.12Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0EAX9_9EUKA2.060e-4760.14Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
UPI001F4FD6845.290e-4758.27vesicle transport protein GOT1B n=1 Tax=Schistocer... [more]
A0A6J1SRK0_FRAOC1.510e-4658.99vesicle transport protein GOT1B n=2 Tax=Thripinae ... [more]
A0A5J4YNX5_PORPP1.660e-4657.14Vesicle transport protein GOT1 n=1 Tax=Porphyridiu... [more]
A0A507CCU7_9FUNG1.160e-4558.39Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A1S3DJP2_DIACI1.230e-4558.27vesicle transport protein GOT1B isoform X2 n=1 Tax... [more]
A0A7S3W5F4_9SPIT3.210e-4559.42Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 18..116
e-value: 7.8E-15
score: 55.4
NoneNo IPR availablePANTHERPTHR21493:SF9GOLGI TRANSPORT PROTEIN 1-RELATEDcoord: 5..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
IPR045176Protein transport protein Got1PANTHERPTHR21493CGI-141-RELATED/LIPASE CONTAINING PROTEINcoord: 5..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5_length_105932_cov_4.447794contigNODE_5_length_105932_cov_4.447794:6021..6533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1978.t1Gcaud1978.t1Gracilaria caudata M_176_S67 malemRNANODE_5_length_105932_cov_4.447794 6021..6533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1978.t1 ID=Gcaud1978.t1|Name=Gcaud1978.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=144bp
MSSPFAITDVRKIGIGLTAFGLAFSVLGVALFFDKGLLAMGNVLYLSGVM
MIIGPTRSVRFFFQKRKAKASVFFFTGMAFVLFGLPMIGMAVELFGFVNL
FGDFFPVVIAFLRRAPVFGKLLGLPVVRNIADRLAGSSTKLPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2
IPR045176Got1