Gcaud1995.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1995.t1
Unique NameGcaud1995.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1043
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1995.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002989Mycobacterial pentapeptide repeatPFAMPF01469Pentapeptide_2coord: 352..378
e-value: 4.2E-7
score: 29.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 891..921
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 991..1009
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 524..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..1015
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..643
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 933..990
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 701..775
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 850..869
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 789..832
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..261
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..1042
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 339..470
NoneNo IPR availableTMHMMTMhelixcoord: 20..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5_length_105932_cov_4.447794contigNODE_5_length_105932_cov_4.447794:52690..55818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1995.t1Gcaud1995.t1Gracilaria caudata M_176_S67 malemRNANODE_5_length_105932_cov_4.447794 52690..55818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1995.t1 ID=Gcaud1995.t1|Name=Gcaud1995.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1043bp
MQRTSVTGKRFRAYRPRSRVAYVRIAFLLVFLSAFVLLKPSFRLFQPHQV
VIHGGVPIDDEASFANDGAHDHDNSPVRVPLPKAPHLESTDHSHLQSSRA
SRIASLRDRRGRHSIFHDQNVIMHDSHQSSNHLDHPILGGEDAQTLKPSL
HHEADDLQQPPSHRFAESDPEQQLPTDVLRNMDAQKETLRADEVLGGAHP
HLKTGHTLDGDAQQHGAQDNEAQAADNLVGDAASKTTVTQDARIHDGNAD
GVNHEDSNDGESSADDASAGDANADAAKANDANADGANADGANDDGTNDD
STNDDGANDDGTNDDSTNDDGANDDSTNDDGTNDGDAEANDADAKDANAD
DANAGDANAGDANAGDANAGDANAGDANADDANADDADADDADADDADAD
DADARDADAKDDDAKDVNADDANTDDNNADDANADDSNADDANLGDSNGD
DANASDANAGDAQAGDAQAGDAQAGETNAAKADDANVDDANADDANANDG
NANDSDAENADAVDAKADGFNADSATANDANADDANTDNPDGNGTIADHA
TDSNTNADRRTASDVTATIANAEVTNADDASADNARANDEHGTGGRSENA
ALGDRNASEHQIDNRREDEQQARDAHVLDDQIRNRREEAFDARIRQGNGA
LDNHGEEGDAQAGGVGRNENFGQNEAGDGRGREEKTYDENNDDFHTRDPQ
GDQKNSILSPLDASINMRQSNTVFAQPQQIHVAEKSAPLSVSSTNVAPQN
VEQQYSASKPVQRSTPLSSGDPQHQQFGELRPVQRIAPVQNAAPQNVQKQ
YYHGNELQPAQRTGHASSISPIQKQYMEPQPHQPTVPQGEMPVAAQGPQK
GLVESQSALGTSHISVDGAQNLRPQVAPLPGQPSVGLQDNKYEEPHVKEN
QNISDSPERNVDERDDPVIMDRPPLRASINQKEPHVPRQSLPQQYPLPQG
PQQSMLVQKNVNVQRSGEGLQHSNISKDEQSYSLDTRLAQRPSEHNGDMI
DHMKRVPERNSNPLYRSFSSSVTNFGSADMKSTLTHAGEFKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002989Mycobac_pentapep