Gcaud2011.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2011.t1
Unique NameGcaud2011.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length212
Homology
BLAST of Gcaud2011.t1 vs. uniprot
Match: A0A2V3INQ4_9FLOR (Mitotic spindle assembly checkpoint protein MAD2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ4_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 9.680e-95
Identity = 143/201 (71.14%), Postives = 172/201 (85.57%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQ----STHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSYSMSDD 211
            +HSI++SGSADLVADFFSY VNTLL+LRGVYPP+TF  AQKYGVTVYL+TD  VQ +LQ VLTQMR+WLH S+LRR+VV+IASAAT+ VLERWAFDVN+++    +   S+PT  K    IM+EIQAIIRQISA+V FLP+LDEACSFD+LIYTDK +QTP KW E+GPR IPNA+QVTLRSFSTS+H+V A VS+S++DD
Sbjct:   21 DHSITISGSADLVADFFSYAVNTLLFLRGVYPPDTFKHAQKYGVTVYLSTDQKVQAYLQTVLTQMRTWLHNSALRRLVVIIASAATRNVLERWAFDVNLSEHHQTTPTASNPTSQKDPQRIMSEIQAIIRQISATVTFLPLLDEACSFDILIYTDKAVQTPTKWHESGPRTIPNAEQVTLRSFSTSLHNVDASVSFSITDD 221          
BLAST of Gcaud2011.t1 vs. uniprot
Match: A0A1L1RLV7_CHICK (HORMA domain-containing protein n=17 Tax=Neognathae TaxID=8825 RepID=A0A1L1RLV7_CHICK)

HSP 1 Score: 218 bits (554), Expect = 1.140e-68
Identity = 97/192 (50.52%), Postives = 149/192 (77.60%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            +  I+L GSA++VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ +TTDP+++ +L NV+ QM+ WL+  +++R+VVVI+S    +VLERW FD+   ++  G S    K Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK++  P KW+E+GP+ I N+++V LRSF+T++H V++ V+Y
Sbjct:    9 QQGITLRGSAEIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELKNYLNNVVEQMKEWLYKCTVQRLVVVISSIENNEVLERWQFDIECDKNARGESAPREKSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLVVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAY 200          
BLAST of Gcaud2011.t1 vs. uniprot
Match: A0A7M4EA82_CROPO (Mitotic arrest deficient 2 like 1 n=2 Tax=Longirostres TaxID=1298654 RepID=A0A7M4EA82_CROPO)

HSP 1 Score: 215 bits (547), Expect = 1.270e-67
Identity = 97/192 (50.52%), Postives = 150/192 (78.12%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            E  I+L GSAD+VA+FFSYG+N++LY RG+YPPETF+ AQ+YG+T+ +T DP++QR+L +V+ Q++ WL+  S++R+VVVI+S  + +VLERW FD+   ++    S    K Q  I  EI+++IRQI+A+V FLP+L+ +C+FD+LIYTDK++  P KW+E+GP+ I N+++V LRSF+T++H V++ V+Y
Sbjct:    8 EQGITLRGSADIVAEFFSYGINSILYQRGIYPPETFTRAQQYGLTLLVTADPELQRYLCSVVDQLKDWLYKCSVQRLVVVISSIESNEVLERWQFDIECDKTAKDESAPRDKSQKAIQDEIRSVIRQITATVTFLPLLETSCAFDLLIYTDKDLVVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSIVAY 199          
BLAST of Gcaud2011.t1 vs. uniprot
Match: A0A7K9ARJ9_DRONO (MD2L1 protein (Fragment) n=77 Tax=Aves TaxID=8782 RepID=A0A7K9ARJ9_DRONO)

HSP 1 Score: 214 bits (544), Expect = 3.750e-67
Identity = 96/192 (50.00%), Postives = 147/192 (76.56%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            +  I+L GSA++VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ +TTDP+++ +L NV+ QM+ WL+   ++R+VVVI+S    +VLERW FD+   ++    S    K Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK++  P KW+E+GP+ I N+++V LRSF+T++H V++ V+Y
Sbjct:    9 QQGITLRGSAEIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELKNYLNNVVEQMKEWLYKCIVQRLVVVISSIENNEVLERWQFDIECDKAAKDESTPREKSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAY 200          
BLAST of Gcaud2011.t1 vs. uniprot
Match: H0YUK6_TAEGU (HORMA domain-containing protein n=118 Tax=Neognathae TaxID=8825 RepID=H0YUK6_TAEGU)

HSP 1 Score: 213 bits (541), Expect = 1.140e-66
Identity = 96/189 (50.79%), Postives = 145/189 (76.72%), Query Frame = 0
Query:   18 ISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            I+L GSA+LVA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ +TTDP++  +L NV  QM+ WL+  +++R+VVVI+S  + +VLERW FD+   ++    +    K Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK++  P KW+E+GP+ I N+++V LRSF+T++H V+  V+Y
Sbjct:   14 ITLRGSAELVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELANYLNNVTEQMKEWLYKCTVQRLVVVISSIESSEVLERWQFDIECDKTAKDDNGPREKSQKAIQDEIRSVIRQITATVTFLPLLESACAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVNTTVAY 202          
BLAST of Gcaud2011.t1 vs. uniprot
Match: A0A7K9HNX3_9AVES (MD2L1 protein (Fragment) n=1 Tax=Bucco capensis TaxID=135168 RepID=A0A7K9HNX3_9AVES)

HSP 1 Score: 211 bits (537), Expect = 3.930e-66
Identity = 94/192 (48.96%), Postives = 147/192 (76.56%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            +  I+L GSA++VA+FFS+G+N++LY RG+YPPETF+  QKYG+++ +TTDP +  +L NV+ Q++ WL+   ++R+VVVI+S    +VLERW FD+   +S    S    K Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK+++ P KW+E+GP+++ N+++V LRSF+T++H V+A V+Y
Sbjct:    9 QQGITLRGSAEIVAEFFSFGINSILYQRGIYPPETFTRVQKYGLSLLVTTDPQLINYLNNVVEQLKEWLYKCHVQRLVVVISSIENNEVLERWQFDIESDKSAKDESAPREKSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLEVPEKWEESGPKLVHNSEEVRLRSFTTTIHKVNAMVAY 200          
BLAST of Gcaud2011.t1 vs. uniprot
Match: C3Z5Z2_BRAFL (HORMA domain-containing protein n=2 Tax=Branchiostoma TaxID=7737 RepID=C3Z5Z2_BRAFL)

HSP 1 Score: 211 bits (537), Expect = 4.050e-66
Identity = 101/197 (51.27%), Postives = 146/197 (74.11%), Query Frame = 0
Query:   14 AEHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSYSMSD 210
            A++SI+L GSA++V++FFSYG+N++LY RG+YPPETFS  QKYG+T+ +TTD +++ +L NVL Q++ WL   ++ ++VVV+ S  T++VLERW FD+   ++    S    K    I  EI+A+IRQI+ASV FLP+L+E CSFD+LIYTDK++Q P  W+E+GP  I  +++V LRSFSTS+H V A V Y  +D
Sbjct:    8 AKNSITLKGSAEIVSEFFSYGINSILYQRGIYPPETFSRVQKYGLTLLVTTDNELKTYLNNVLMQLKDWLLDKTVEKLVVVVTSIDTQEVLERWQFDIECDKTMTEDSKPREKPLKEINDEIKAVIRQITASVTFLPLLEENCSFDLLIYTDKDLQVPETWEESGPHFIAKSEEVRLRSFSTSIHKVDAMVCYKNAD 204          
BLAST of Gcaud2011.t1 vs. uniprot
Match: A0A8D0GVY0_SPHPU (Mitotic arrest deficient 2 like 1 n=5 Tax=Amniota TaxID=32524 RepID=A0A8D0GVY0_SPHPU)

HSP 1 Score: 210 bits (535), Expect = 8.420e-66
Identity = 95/192 (49.48%), Postives = 145/192 (75.52%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            E  I+L GSA++VA+FFSYG+N++LY RG+YP ETF+  QKYG+T+ +TTDP+++ +L NV+ Q++ WL+   ++R+VVVI+S  + +VLERW FD+   +S         + Q  I  EI+++IRQI+ASV FLP+L+  C+FD+LIYTDK++  P KW+E+GP+ I N+++V LRSF+T++H VS+ V+Y
Sbjct:    8 EQGITLRGSAEIVAEFFSYGINSILYQRGIYPSETFTRVQKYGLTLLVTTDPELKNYLNNVVEQLKDWLYKCLVQRLVVVISSIESSEVLERWQFDIECDRSAKDDGAPRERSQKAIQDEIRSVIRQITASVTFLPLLETTCAFDLLIYTDKDLAVPEKWEESGPQFIANSEEVRLRSFTTTIHKVSSMVAY 199          
BLAST of Gcaud2011.t1 vs. uniprot
Match: G1NE25_MELGA (Mitotic arrest deficient 2 like 1 n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=G1NE25_MELGA)

HSP 1 Score: 213 bits (541), Expect = 9.080e-66
Identity = 95/186 (51.08%), Postives = 144/186 (77.42%), Query Frame = 0
Query:   15 EHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDV 200
            +  I+L GSA++VA+FFSYG+N++LY RG+YPPETF+  QKYG+T+ +TTDP+++ +L NV+ QM+ WL+  +++R+VVVI+S    +VLERW FD+   ++  G S    K Q  I  EI+++IRQI+A+V FLP+L+ AC+FD+LIYTDK++  P KW+E+GP+ I N+++V LRSF+T++H V
Sbjct:    9 QQGITLRGSAEIVAEFFSYGINSILYQRGIYPPETFTRVQKYGLTLLVTTDPELKNYLNNVVEQMKEWLYKCTVQRLVVVISSIENNEVLERWQFDIECDKNAKGESAPREKSQKAIQDEIRSVIRQITATVTFLPLLETACAFDLLIYTDKDLVVPEKWEESGPQFIANSEEVRLRSFTTTIHKV 194          
BLAST of Gcaud2011.t1 vs. uniprot
Match: F7GB10_MONDO (HORMA domain-containing protein n=5 Tax=Metatheria TaxID=9263 RepID=F7GB10_MONDO)

HSP 1 Score: 209 bits (532), Expect = 2.400e-65
Identity = 96/194 (49.48%), Postives = 148/194 (76.29%), Query Frame = 0
Query:   13 TAEHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETFSPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAATKKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLPILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDVSACVSY 206
            T +  I+L GSAD+VA+FFS+GVN++LY RG+YP ETF+  QKYG+T+ +TTDPD+ ++L NV+ Q++ WL+  S++++VVVI++  + +VLERW FD+   ++    S    K   +I  EI+++IRQI+A+V FLP+L+ ACSFD+LIYTDK +  P KW+E+GP+ I N+++V LRSF+T++H V++ V+Y
Sbjct:    6 TRDQGITLRGSADIVAEFFSFGVNSILYQRGIYPSETFTRVQKYGLTLLVTTDPDLIKYLNNVVDQLKDWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKEDSAPREKSAKSIQDEIRSVIRQITATVTFLPLLEAACSFDLLIYTDKELVVPDKWEESGPQFIANSEEVRLRSFTTTIHKVNSMVAY 199          
The following BLAST results are available for this feature:
BLAST of Gcaud2011.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ4_9FLOR9.680e-9571.14Mitotic spindle assembly checkpoint protein MAD2A ... [more]
A0A1L1RLV7_CHICK1.140e-6850.52HORMA domain-containing protein n=17 Tax=Neognatha... [more]
A0A7M4EA82_CROPO1.270e-6750.52Mitotic arrest deficient 2 like 1 n=2 Tax=Longiros... [more]
A0A7K9ARJ9_DRONO3.750e-6750.00MD2L1 protein (Fragment) n=77 Tax=Aves TaxID=8782 ... [more]
H0YUK6_TAEGU1.140e-6650.79HORMA domain-containing protein n=118 Tax=Neognath... [more]
A0A7K9HNX3_9AVES3.930e-6648.96MD2L1 protein (Fragment) n=1 Tax=Bucco capensis Ta... [more]
C3Z5Z2_BRAFL4.050e-6651.27HORMA domain-containing protein n=2 Tax=Branchiost... [more]
A0A8D0GVY0_SPHPU8.420e-6649.48Mitotic arrest deficient 2 like 1 n=5 Tax=Amniota ... [more]
G1NE25_MELGA9.080e-6651.08Mitotic arrest deficient 2 like 1 n=1 Tax=Meleagri... [more]
F7GB10_MONDO2.400e-6549.48HORMA domain-containing protein n=5 Tax=Metatheria... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainPFAMPF02301HORMAcoord: 23..196
e-value: 2.9E-19
score: 69.5
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 21..204
score: 41.39674
IPR036570HORMA domain superfamilyGENE3D3.30.900.10HORMA domaincoord: 11..210
e-value: 1.6E-67
score: 228.7
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 17..208
IPR027097Mitotic spindle checkpoint protein Mad2PANTHERPTHR11842:SF11MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Acoord: 13..209
IPR045091Mad2-likePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 13..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5_length_105932_cov_4.447794contigNODE_5_length_105932_cov_4.447794:105226..105861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2011.t1Gcaud2011.t1Gracilaria caudata M_176_S67 malemRNANODE_5_length_105932_cov_4.447794 105226..105861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2011.t1 ID=Gcaud2011.t1|Name=Gcaud2011.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=212bp
MTPQSATPTASPTAEHSISLSGSADLVADFFSYGVNTLLYLRGVYPPETF
SPAQKYGVTVYLTTDPDVQRFLQNVLTQMRSWLHASSLRRVVVVIASAAT
KKVLERWAFDVNVAQSTHGSSPTGTKKQATIMAEIQAIIRQISASVAFLP
ILDEACSFDMLIYTDKNIQTPAKWQETGPRIIPNAQQVTLRSFSTSVHDV
SACVSYSMSDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
IPR036570HORMA_dom_sf
IPR027097Mad2
IPR045091Mad2-like