Gcaud9864.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9864.t1
Unique NameGcaud9864.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
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BLAST of Gcaud9864.t1 vs. uniprot
Match: A0A2V3J675_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J675_9FLOR)

HSP 1 Score: 151 bits (381), Expect = 8.210e-39
Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 0 
Query:  159 AVDIIDPRVVFSVAQSQSLAFAAAGLFRKKRDSEETFNSSSTEYYEDDYTRFLEKKHCLSPSRLIQHPYISKMINYDGWSLRSSKLDLRNDSALSIPTSDEDYFP 263
            AVDIIDPRVVFS+AQS SLAFA +GLFRKKRDS+ET NS+STEYYED+YTRF+EK+H LSPSRLI HP IS M+ ++ WSLR SK    ++S LSIP SD+DY P
Sbjct:  413 AVDIIDPRVVFSIAQSPSLAFATSGLFRKKRDSDETINSTSTEYYEDEYTRFIEKRHSLSPSRLIHHPKISMMMGHESWSLRGSK-QKESESTLSIPESDDDYCP 516
The following BLAST results are available for this feature:
BLAST of Gcaud9864.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J675_9FLOR8.210e-3971.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_584_length_21412_cov_4.339853contigNODE_584_length_21412_cov_4.339853:4885..6408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9864.t1Gcaud9864.t1Gracilaria caudata M_176_S67 malemRNANODE_584_length_21412_cov_4.339853 4885..6408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9864.t1 ID=Gcaud9864.t1|Name=Gcaud9864.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MPRRARPHSFRPRRRREQHSGSASSPTASMRDESVSVKEEAYADVSVADF
VDVPSNRFAALKEPRQHKVVPPPSYDLFSAAPRERRRASEPAVVSDPCYF
GALPFVEHAECSAYSRPDSSCSSQSSLDSNVIQLHQQSTPLNPHTDILRL
RYHPFETTAVDIIDPRVVFSVAQSQSLAFAAAGLFRKKRDSEETFNSSST
EYYEDDYTRFLEKKHCLSPSRLIQHPYISKMINYDGWSLRSSKLDLRNDS
ALSIPTSDEDYFPAS*
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