Gcaud8287.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8287.t1
Unique NameGcaud8287.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length198
Homology
BLAST of Gcaud8287.t1 vs. uniprot
Match: A0A2V3IW50_9FLOR (Pyridoxal 5'-phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW50_9FLOR)

HSP 1 Score: 214 bits (545), Expect = 1.210e-67
Identity = 105/197 (53.30%), Postives = 138/197 (70.05%), Query Frame = 0
Query:    1 MSRPPVWQKLIDSCLQQEGKPTSYFLQLATLTVSGEASCRTVVFRGWDVTTSK-STPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRANTRSLFELGKDGDWVENSIN 196
            M   P W +LI+SC+++E  PT+ FLQLATLT  GEASCRTVVFRGW  T    +TP+L + TD+RS K+ GL +YP+AEACWYF ++R QFRLT  V+VI S+E +  L   R  +WR +  +AR V+ACPPPGR  E   SEE K  +  S +P+E FA+L+LKP RVD+VDLRAN R L ++G + +W E  +N
Sbjct:    1 MGLEPDWVQLINSCIKREASPTARFLQLATLTELGEASCRTVVFRGWHTTPDTITTPALKVVTDNRSNKIPGLRKYPRAEACWYFTESRKQFRLTGNVTVIDSEEGDGVLSRTRLEQWRQMPASARTVFACPPPGRAAEDPLSEEQKEMIVESEQPVECFALLLLKPTRVDIVDLRANDRQLSQIGANTEWTEQWLN 197          
BLAST of Gcaud8287.t1 vs. uniprot
Match: A0A8J6R3Q0_9CYAN (Pyridoxamine 5'-phosphate oxidase family protein n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6R3Q0_9CYAN)

HSP 1 Score: 115 bits (287), Expect = 9.650e-29
Identity = 70/199 (35.18%), Postives = 111/199 (55.78%), Query Frame = 0
Query:    1 MSRPPVWQKLIDSCLQQE-GKPTSYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            MS  P W+  +   L +   +P + FLQLAT+ ++G+ + RTVVFRG+       T  L   TD+RS K + + + PKAEACWYF   R QFR+   +++I + + +  L   R   W++LS  AR  +A P PG P     +     +  ++ EP+ +F +L+L+PERVD ++LR     R L++  ++  W   +IN
Sbjct:    1 MSLAP-WRSPLSRALHRNRSQPEARFLQLATIQLNGQPANRTVVFRGF----LNDTDQLKFVTDTRSEKTEQIEQNPKAEACWYFIKTREQFRIAGTLTLIHATDPDSALQQARKTAWQELSDAARLQFAWPTPGEPRADTAA--FAPQPPDNTEPLPYFCLLLLEPERVDHLELRGEPQNRCLYQRDQNQVWSAQAIN 192          
BLAST of Gcaud8287.t1 vs. uniprot
Match: A0A140KAK8_9CYAN (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=1 Tax=Stanieria sp. NIES-3757 TaxID=1807358 RepID=A0A140KAK8_9CYAN)

HSP 1 Score: 110 bits (274), Expect = 8.660e-27
Identity = 70/177 (39.55%), Postives = 103/177 (58.19%), Query Frame = 0
Query:   23 SYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSN-EPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            S +LQLAT+T  G  + RTVVFRG+     + T  L I TDSRSAK+  +    +AE CWYF  +R QFR+   + +I+  E ++ L   R   W+ LS  AR  +A P PG  H  E ++EA +  A S   P++ F +L+LKP++VD ++L+ +   R  + L KD  W+  S+N
Sbjct:   23 SRYLQLATITPEGLPANRTVVFRGF----LEGTNYLQIITDSRSAKIAQIQYQSEAEICWYFTKSREQFRIFGTLLLITEKEQDNSLKLARQIAWQKLSSPARLQFAWPDPG--HTRESNQEAFSPPAPSELNPLDNFCLLLLKPKKVDHLELKGDPQNRCWYILSKDQSWISKSVN 193          
BLAST of Gcaud8287.t1 vs. uniprot
Match: UPI0018809325 (pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Cyanobacterium stanieri TaxID=102235 RepID=UPI0018809325)

HSP 1 Score: 108 bits (270), Expect = 3.250e-26
Identity = 64/193 (33.16%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    7 WQKLIDSCLQ-QEGKPTSYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            W+  +   L     KP S + Q+AT+   G    RTVVFRG+   T+    +L I TD RS K + L + P++E CWYF   R QFR+   + +I+  E N ++ + R + W  LS NA+  +  P PG     +  +E      +  +P++ F +L+LKP++VD + L+ N   R  + L +  +WV  +IN
Sbjct:    7 WRSPLAKALHLNRAKPHSRYFQIATINPEGFPHNRTVVFRGFYADTN----NLQIITDIRSEKYQHLQKQPQSEICWYFTKTREQFRIQGLIDIITYQENNKNMSHARQQAWEKLSDNAKIQFTWPTPGE----KVIKEYHTATDSLEQPLDTFCLLILKPQKVDHLQLKGNPQNRYRYHLDEKNNWVITAIN 191          
BLAST of Gcaud8287.t1 vs. uniprot
Match: UPI001E4622A0 (pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Nostoc sp. CHAB 5836 TaxID=2780404 RepID=UPI001E4622A0)

HSP 1 Score: 105 bits (262), Expect = 5.320e-25
Identity = 62/174 (35.63%), Postives = 100/174 (57.47%), Query Frame = 0
Query:   25 FLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            ++QLAT+  +G  + RT+VFRG+     + T  L + TD+RSAK   + + P AE CWYF + R QFR++  ++++SSD+++ DL   R   W++LS  AR  +A P PG+P   E     +    +S EP+  F +L+L P +VD ++LR     R  +   ++ +W    IN
Sbjct:   25 YVQLATVQANGRPANRTLVFRGF----LEDTNQLKLITDTRSAKTHQIQQQPWAEICWYFPNTREQFRISGCLTLVSSDDSDQDLQPARIAMWQELSDAARLQFAWPHPGKPRIQEAG-AFEPPPPDSIEPVPNFCLLLLDPVQVDHLELRGEPQNRRFYRRDQNQEWFCEEIN 193          
BLAST of Gcaud8287.t1 vs. uniprot
Match: A0A3C1M1E2_9CYAN (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Cyanobacteria bacterium UBA8156 TaxID=2055767 RepID=A0A3C1M1E2_9CYAN)

HSP 1 Score: 104 bits (260), Expect = 7.590e-25
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 0
Query:   21 PTSYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRANTRSLFELGKDGD 189
            P + +LQLAT+T +GE + RTVVFRG+    ++S   L   TD RSAK++ L   P+AEACWYF + R Q+R++  V +++ DE        R   W  LS  AR+ +A P PG+P     +E     VA    P + F VL L P+RV+ + LR + +  +   ++GD
Sbjct:   20 PHARYLQLATVTPTGEPTNRTVVFRGF----AESNDGLQFVTDHRSAKIQHLQVNPQAEACWYFVETREQYRISGRVQIVTGDE--------RRPLWEALSAKARQQFAWPHPGQPR----AESKAFAVAAPALPPDTFWVLRLWPDRVERLALRGDPQDRWHYWREGD 172          
BLAST of Gcaud8287.t1 vs. uniprot
Match: UPI0018C80588 (pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=Nostoc TaxID=1177 RepID=UPI0018C80588)

HSP 1 Score: 104 bits (259), Expect = 1.490e-24
Identity = 69/199 (34.67%), Postives = 106/199 (53.27%), Query Frame = 0
Query:    1 MSRPPVWQKLIDSCLQQEGKPT-SYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            MS  P W+  I   L +      + +LQLAT+      + RTVVFRG+     + T  L   +D RSAK   + + P AE CWYF + R QFR+T  ++++SSD+++ DL   R   W++LS  AR  +A P PG+P   E +E  +    ++ +P+  F +L+L P +VD ++LR     R L+      +W    IN
Sbjct:    1 MSLAP-WRSAIAHALHRNRSLVYARYLQLATVQAGDRPANRTVVFRGF----LEDTNQLKFISDRRSAKADQIQQQPWAEICWYFPNTREQFRITGCLTLVSSDDSHQDLQPARISMWQELSDAARLQFAWPDPGKPRIKE-AEAFEPPPPDAVQPVPNFCLLLLDPVQVDHLELRGEPQNRWLYHRDDQQEWSSQEIN 193          
BLAST of Gcaud8287.t1 vs. uniprot
Match: B2J933_NOSP7 (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=12 Tax=Nostocaceae TaxID=1162 RepID=B2J933_NOSP7)

HSP 1 Score: 103 bits (256), Expect = 4.150e-24
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 0
Query:   25 FLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            +LQLAT+  +G  + RT+VFRG+     + T  L   TD+RSAK   + + P AE CWYF + R QFR+   +++ISSD+++ DL   R   W++LS  AR  +  P PG+P   E S   +    +  EP+  F +L+L P +VD ++LR     R L+      +W   +IN
Sbjct:   25 YLQLATVQPNGRPANRTLVFRGF----LEDTNQLRFITDTRSAKADQIQQQPWAEICWYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKE-SGAFEPSPPDPIEPVPNFCLLLLDPVQVDHLELRGEPQNRWLYHRNDQQEWSSEAIN 193          
BLAST of Gcaud8287.t1 vs. uniprot
Match: UPI000DB941E0 (pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DB941E0)

HSP 1 Score: 102 bits (255), Expect = 4.910e-24
Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 0
Query:    5 PVWQKLIDSCLQQEGKPTSYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRANT--RSLFELGKDGDWVENSIN 196
            P W  L+   L    +P++ +LQLA+L  SG  +CRT+V R        +T SL++ TD RS KVKGL  + +AEACWY    + QFRL   V++     +     +LR   W  LS  +R+ +  P PG    H   + +         P + F +L+L+P RVD +DL A+   R L+E  + G+W +  +N
Sbjct:    6 PAWFPLLQHALHANPQPSARYLQLASLDDSGAVTCRTLVCRAL----LDATASLVMTTDLRSTKVKGLKHHRQAEACWYLPARQQQFRLRGEVTLKGPGRSA----SLRDELWERLSEASRQTFTRPAPG----HSLGQASAFTHPAPTAPPDCFGLLVLQPFRVDYLDLAASPHERQLYEY-RAGEWHQRPLN 186          
BLAST of Gcaud8287.t1 vs. uniprot
Match: UPI001E33E765 (pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Nostoc sp. XA010 TaxID=2780407 RepID=UPI001E33E765)

HSP 1 Score: 102 bits (255), Expect = 5.850e-24
Identity = 65/193 (33.68%), Postives = 104/193 (53.89%), Query Frame = 0
Query:    7 WQKLIDSCLQQEGKPT-SYFLQLATLTVSGEASCRTVVFRGWDVTTSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVISSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVANSNEPIEWFAVLMLKPERVDVVDLRAN--TRSLFELGKDGDWVENSIN 196
            W+  I   LQ+      + +LQLAT+  +G  + RT+VFRG+     + T  L   TD+RSAK   + + P AE CWYF + R QFR+T  ++++S D+++ +L   R   W++LS  AR  +A P PG+P   E     +    +  EP+  F +L+L P ++D ++LR     R L+      +W   +IN
Sbjct:    6 WRSAIAHALQRNRSLVYARYLQLATVQPNGRPANRTLVFRGF----LEDTNQLKFITDTRSAKADQIQQQPWAEVCWYFPNTREQFRITGCLTLVSGDDSDQNLQLARIAMWQELSHAARLQFAWPHPGKPRIQELG-AFEPPAPDPIEPVPNFCLLLLDPMQLDHLELRGEPQNRWLYCRNDHQEWSNEAIN 193          
The following BLAST results are available for this feature:
BLAST of Gcaud8287.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW50_9FLOR1.210e-6753.30Pyridoxal 5'-phosphate synthase n=1 Tax=Gracilario... [more]
A0A8J6R3Q0_9CYAN9.650e-2935.18Pyridoxamine 5'-phosphate oxidase family protein n... [more]
A0A140KAK8_9CYAN8.660e-2739.55Pyridoxamine 5'-phosphate oxidase-related, FMN-bin... [more]
UPI00188093253.250e-2633.16pyridoxamine 5'-phosphate oxidase family protein n... [more]
UPI001E4622A05.320e-2535.63pyridoxamine 5'-phosphate oxidase family protein n... [more]
A0A3C1M1E2_9CYAN7.590e-2538.46Pyridoxamine 5'-phosphate oxidase n=1 Tax=Cyanobac... [more]
UPI0018C805881.490e-2434.67pyridoxamine 5'-phosphate oxidase family protein n... [more]
B2J933_NOSP74.150e-2436.78Pyridoxamine 5'-phosphate oxidase-related, FMN-bin... [more]
UPI000DB941E04.910e-2434.54pyridoxamine 5'-phosphate oxidase family protein n... [more]
UPI001E33E7655.850e-2433.68pyridoxamine 5'-phosphate oxidase family protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012349FMN-binding split barrelGENE3D2.30.110.10coord: 2..196
e-value: 4.3E-44
score: 152.7
IPR024624Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domainPFAMPF12766Pyridox_oxase_2coord: 6..100
e-value: 3.7E-20
score: 72.4
IPR024015Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 familyTIGRFAMTIGR04026TIGR04026coord: 5..196
e-value: 3.7E-43
score: 145.6
IPR000659Pyridoxamine 5'-phosphate oxidasePANTHERPTHR10851PYRIDOXINE-5-PHOSPHATE OXIDASEcoord: 6..196
NoneNo IPR availablePANTHERPTHR10851:SF3PYRIDOXINE/PYRIDOXAMINE 5'-PHOSPHATE OXIDASE 2coord: 6..196
NoneNo IPR availableSUPERFAMILY50475FMN-binding split barrelcoord: 8..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_572_length_21721_cov_4.382386contigNODE_572_length_21721_cov_4.382386:6585..7270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8287.t1Gcaud8287.t1Gracilaria caudata M_176_S67 malemRNANODE_572_length_21721_cov_4.382386 6585..7270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8287.t1 ID=Gcaud8287.t1|Name=Gcaud8287.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=198bp
MSRPPVWQKLIDSCLQQEGKPTSYFLQLATLTVSGEASCRTVVFRGWDVT
TSKSTPSLLIATDSRSAKVKGLLEYPKAEACWYFRDARVQFRLTTYVSVI
SSDETNDDLFNLRSRKWRDLSPNAREVYACPPPGRPHEHEFSEEAKAEVA
NSNEPIEWFAVLMLKPERVDVVDLRANTRSLFELGKDGDWVENSINR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012349Split_barrel_FMN-bd
IPR024624Pyridox_Oxase_Alr4036_FMN-bd
IPR024015Pyridox_Oxase_FMN-dep_Alr4036
IPR000659Pyridox_Oxase