Gcaud807.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud807.t1
Unique NameGcaud807.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length257
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud807.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 78..244
e-value: 0.0015
score: 27.8
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 74..248
e-value: 5.3E-8
score: 34.9
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 76..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..256
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..58
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_563_length_21865_cov_4.553550contigNODE_563_length_21865_cov_4.553550:15222..15992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud807.t1Gcaud807.t1Gracilaria caudata M_176_S67 malemRNANODE_563_length_21865_cov_4.553550 15222..15992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud807.t1 ID=Gcaud807.t1|Name=Gcaud807.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bp
MLGTEVSLHFGRLYHRRSATFGLFFILIPLFYLSSEMKLAAVLILGSFFA
CVANSLSLGEAEANLNSQVRVASNDSCQVNVCFAIDSRNFRYSFDEIRSF
VFNMTSALAPINNVKFAAVQYGDLIIQISNLTSNLDAFESAFLTTALERI
GFSTASHGIMACTFELGAEVGKVSKIIVVSSGVITVESDAVRDASTFRKL
LGEGASLSTVQVESTSVDTQKLRDIARAGGGQQYKPDEFLSLTCDILNLV
RDQGCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf