Gcaud8302.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8302.t1
Unique NameGcaud8302.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length100
Homology
BLAST of Gcaud8302.t1 vs. uniprot
Match: A0A2V3IQS2_9FLOR (Group B oligopeptidase PepB n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS2_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 2.900e-26
Identity = 51/95 (53.68%), Postives = 71/95 (74.74%), Query Frame = 0
Query:    1 MTKAYLDVMFEVVDSHIEDNRRILELQAEVMGKELLDPWDLWATSPLETKEDELLYDEAIEFIADAVGEYIPDAHDFVISMRDNERIESEIRENK 95
            MTK   D MF +++ H +DNR  L +QAE  GK++LDPWDLWA+SPLET+ED + +D+AI+ IA+ VGEY+P+A +FV  MRD++ IE+ I   K
Sbjct:  305 MTKPSHDAMFRMIEKHAKDNRGTLRIQAEAWGKQVLDPWDLWASSPLETEEDLVPFDQAIDLIAEVVGEYVPEAREFVKGMRDDKLIEASIGNTK 399          
BLAST of Gcaud8302.t1 vs. uniprot
Match: A0A2V3IH89_9FLOR (Oligoendopeptidase F-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH89_9FLOR)

HSP 1 Score: 70.5 bits (171), Expect = 4.610e-12
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    4 AYLDVMFEVVDSHIEDNRRILELQAEVMGKELLDPWDLWATSPLETKEDELL-YDEAIEFIADAVGEYIPDAHDFVISMRDNERIES 89
            A LD +FE +DS+ E  RR +++QA+V+GK  L+PWDL+A +P+         +DE IE IA+AV E   +A  FV  MRD   IE+
Sbjct:  287 ATLDALFEALDSNTEVGRRAMKIQAKVLGKTALEPWDLFAPAPVRKNVGRTYTFDEGIELIANAVAEVDEEAGAFVKMMRDKRWIEA 373          
BLAST of Gcaud8302.t1 vs. uniprot
Match: R7QLG6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG6_CHOCR)

HSP 1 Score: 65.9 bits (159), Expect = 2.000e-10
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 MTKAYLDVMFEVVDSHIEDNRRILELQAEVMGKELLDPWDLWATSPLETKEDELLY--DEAIEFIADAVGEYIPDAHDFVISMRDNERIES 89
            M+ A L  + + +DS +E  RR L +QA+V+ K+ L+PWDL+A +PL       +Y  DE IE IADAVG     A  FV  M++N  IE+
Sbjct:  713 MSNATLAALLKSLDSSVEVGRRALAIQAKVLKKDALEPWDLFAPAPLAGTHTGKMYTFDEGIELIADAVGAVDESAGKFVRIMKENGWIEA 803          
BLAST of Gcaud8302.t1 vs. uniprot
Match: A0A1Y0IVT6_9BACL (Oligoendopeptidase n=2 Tax=Tumebacillus TaxID=432330 RepID=A0A1Y0IVT6_9BACL)

HSP 1 Score: 54.7 bits (130), Expect = 1.620e-6
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 MTKAYLDVMFEVVDSHIEDNRRILELQAEVMGKELLDPWDLWATSPLETKEDELLYDEAIEFIADAVGEYIPDAHDFVISMRDNERIESEIRENK 95
            M++A LDVM++V+D + E   + L  +AE++G + L  +DL+A++   T E    YDE   FI +   E+ PD  DF     +   IE+E R  K
Sbjct:  259 MSRATLDVMWDVIDKNKEVFVKFLNRKAELIGADKLSYYDLYAST--STVETSYTYDEGANFIVEQFQEFSPDFADFAKQAFEQSWIEAEDRPGK 351          
The following BLAST results are available for this feature:
BLAST of Gcaud8302.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IQS2_9FLOR2.900e-2653.68Group B oligopeptidase PepB n=2 Tax=Gracilariopsis... [more]
A0A2V3IH89_9FLOR4.610e-1244.83Oligoendopeptidase F-like n=1 Tax=Gracilariopsis c... [more]
R7QLG6_CHOCR2.000e-1042.86Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1Y0IVT6_9BACL1.620e-635.79Oligoendopeptidase n=2 Tax=Tumebacillus TaxID=4323... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1370.30coord: 1..97
e-value: 2.4E-11
score: 45.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5600_length_1505_cov_4.568600contigNODE_5600_length_1505_cov_4.568600:189..488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8302.t1Gcaud8302.t1Gracilaria caudata M_176_S67 malemRNANODE_5600_length_1505_cov_4.568600 189..488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8302.t1 ID=Gcaud8302.t1|Name=Gcaud8302.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=100bp
MTKAYLDVMFEVVDSHIEDNRRILELQAEVMGKELLDPWDLWATSPLETK
EDELLYDEAIEFIADAVGEYIPDAHDFVISMRDNERIESEIRENKNLAS*
back to top