Gcaud2666.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2666.t1
Unique NameGcaud2666.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length329
Homology
BLAST of Gcaud2666.t1 vs. uniprot
Match: A0A2V3ICL9_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICL9_9FLOR)

HSP 1 Score: 155 bits (392), Expect = 3.710e-40
Identity = 100/282 (35.46%), Postives = 151/282 (53.55%), Query Frame = 0
Query:   30 NVRIDFDEGRHWWKGDFRFWENVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRIR-RLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVLR-SVHNFYSQNTTTQGDWNRLSFVVDEHVVETALDHQTVLKLRNVVDVGDLAEYKACSCLYRAVAVAHSSVIEGAATAGRRLGKKRSNGLPRRRVHQCMLRRPLHEVLDTFVEKITDAVQEIV-----TDDLDASGFYLQMTKLLRKVERIYMEIGADSF 304
            NV +D D  R +W G+ RFW NV  FA +L       NI DAM RYPSSVLV  G++T+FG        R+R  LPR  NA S+F    +       WFE ++YGR+QE+ +H+T+V EYVL  +     +     +     L  +V++  +    +   V+ L   V    +    A  CL RA+ VA+S+V++G A AGRR G KR     R+RV   M+RR   EV+D  + ++ +A+ + +      + L +    LQ+T+LLR +E++++ IG   F
Sbjct:  129 NVLLDLDRERKFWSGESRFWTNVFAFAIRLPPAKNLHNILDAMNRYPSSVLVHTGVQTIFGFVRKHRKERVRVSLPRP-NAFSVFDGFAANGHPTSKWFERNSYGRVQEIAIHITSVVEYVLCCATRAREASKCAKEAHAAFLKSLVEDIQLSQVRNSLEVILLSPFVVAETMDVDLASQCLQRAIEVANSAVLKGLAKAGRRYGLKRMKCTTRKRVQLWMMRRLFPEVMDMTMIELKNAISQTLGPADKEEGLGSDLVELQLTRLLRAMEKLFINIGDSYF 409          
BLAST of Gcaud2666.t1 vs. uniprot
Match: A0A2V3ICI1_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICI1_9FLOR)

HSP 1 Score: 148 bits (374), Expect = 1.230e-37
Identity = 99/313 (31.63%), Postives = 156/313 (49.84%), Query Frame = 0
Query:   12 SNLVLLKKATARKISTRVNVRIDFDEGRHWWKGDFRFWENVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRIR-RLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVLRSVHNFYSQNTTTQGDWNRLSFVVDEHVVETALDH------QTVLKLRNVVDVGDLAEYKACSCLYRAVAVAHSSVIEGAATAGRRLGKKRSNGLPRRRVHQCMLRRPLHEVLDTFVEKITDAVQEIV-----TDDLDASGFYLQMTKLLRKVERIYMEIGADSFQDTSDHQG 312
            S+  + K+    ++    NV ++   G   W GD RFW NV  FA KL   N+  N+ DAMR YPSSVL   G++ +F              LPR  N  S F            WFE   YGR+QE+ VH+++VAE+VL    +   Q+  T+      ++ +    +E  +DH       +V+K R    + +    KA   L RA+ VAHS+V++G A +GRR G KR+    RR+V   M+RR   EV+D  + ++  A+ +IV     +  +D     + +T++LR  E++Y+ +G   F++   + G
Sbjct:  100 SSAAVAKRHILEEVHVPKNVVVELKAGDKLWHGDRRFWTNVLAFAMKLPSLNEVSNVLDAMRCYPSSVLFNTGVQQLFSTVRKHSKKCAHVSLPRP-NVFSSFDCSAPSGNPTSMWFESTTYGRVQEIAVHISSVAEHVLCCAFHAREQSNCTKE-----AYAILLKALEAGIDHIEHEDLSSVVKWRGAESIENTEVEKASPLLQRAIEVAHSAVLKGLAISGRRYGLKRTKYNTRRKVQLWMMRRLFPEVMDICIVRLKLAISDIVEVTEESSAMDVDLLEMYLTRILRTAEKLYIRVGDMHFKEQFKNVG 406          
BLAST of Gcaud2666.t1 vs. uniprot
Match: A0A2V3ICP7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP7_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 9.510e-36
Identity = 98/276 (35.51%), Postives = 150/276 (54.35%), Query Frame = 0
Query:   42 WKGDFRFWENVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRIRRLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVLRSVHNFYSQNTTTQGDWNRLSFVVDEHVVETALDHQTVLK-LRNVVDVGDLAEYKACSCLYRAVAVAHSSVIEGAATAGRRLGKKRSNGLPRRRVHQCMLRRPLHEVLDTFVEKITDAVQEIV-----TDDLDASGFYLQMTKLLRKVERIYMEIGADSFQDTSDHQ 311
            W G  RFW+NV  FA+ L    + +NI  AM RYPSSVLV  G + +F +Y  +G + I RL  S NA S F    + N  A+ W+E D + RLQE+ VHLTAVAEYVLR  +     +       N ++  +   ++ T  D   VLK L+ ++   DL+E +A +CL  A+  AH +V+ G+A +GR+ GKKR + + R+RV    L     EV++  +E ++ +  E++       +L    F  +M K+LR    +Y  +G   F++  + Q
Sbjct:  453 WNGGKRFWDNVSRFASMLPIPGRFENILYAMERYPSSVLVHTGFRPLFDKYRKLGATPICRLLPSPNAFSEFCSSKN-NSTAKDWYEDDCHTRLQEIAVHLTAVAEYVLRCAYISLRYSDINDAFMNLVTTRIA--LIGTDDDPHFVLKSLKGLL--WDLSEEEAYTCLRLAMRSAHDAVLRGSAISGRKHGKKRQSSVGRQRVKLKQLHAIPTEVVNLLIENLSHSSTEVIGAGKGAHELHIDEFEFRMKKVLRGAGDLYKRVGMKFFKEVFEFQ 723          
BLAST of Gcaud2666.t1 vs. uniprot
Match: A0A2V3IXK5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK5_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 4.960e-32
Identity = 102/295 (34.58%), Postives = 152/295 (51.53%), Query Frame = 0
Query:   17 LKKATARKISTRVNVR--IDFDEGRHWWKGDFRFWENVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRIRRLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVLRSVHNFYSQNTTTQGDWNRLSFVVDEHVVETALDHQTVLKLRNVVDVGDLAEYKACSCLYRAVAVAHSSVIEGAATAGRRLGKKRSNGLPRRRVHQCMLRRPLHEVLDTFVEKITDAVQEIVTDD-----LDASGFYLQMTKLLRKVERIYMEIGADSF 304
            LK+  ARK   R+NV   I   E   +W G  RFW+N+  FA  LS     +N+  AM  YPSSVLV  G + +F +   +GT  I  L    NA S FS     +  AR W++ D + RLQE  VHLTA+AEYVLR    F S+ ++        S      ++ET  + Q VL+    + + D+ E +A  CL  A+  AH++V+ G A AGR+ GKK+ N   R++V    ++    +V D  +  +  ++ EI+        LD+  F  +M ++LR V+ +Y  +G   F
Sbjct:  529 LKENPARK---RINVAPAIVIGESVTFWLGGQRFWDNIVRFARMLSLWGSYENVLWAMELYPSSVLVNTGFRPLFEKNKKLGTKPIACLLPYPNAFSEFS-ASKVHSTARNWYKDDCFTRLQETAVHLTAIAEYVLRCA--FISRKSSDVMKSFMDSLTTRITMIETGSNSQLVLRGSKGL-LRDMPEEEADMCLRMAMKAAHNAVVRGLAVAGRKKGKKKQNLEARQKVDLLQIQSIPAQVSDILIANVELSLMEILGGKTECQILDSDEFEFRMKRVLRGVQYLYQTVGVKFF 816          
BLAST of Gcaud2666.t1 vs. uniprot
Match: A0A2V3IC00_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC00_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 5.390e-32
Identity = 100/295 (33.90%), Postives = 152/295 (51.53%), Query Frame = 0
Query:   17 LKKATARKISTRVNVR--IDFDEGRHWWKGDFRFWENVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRIRRLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVLRSVHNFYSQNTTTQGDWNRLSFVVDEHVVETALDHQTVLKLRNVVDVGDLAEYKACSCLYRAVAVAHSSVIEGAATAGRRLGKKRSNGLPRRRVHQCMLRRPLHEVLDTFVEKITDAVQEIVTDD-----LDASGFYLQMTKLLRKVERIYMEIGADSF 304
            LK+  ARK   R+NV   I   E   +W G  RFW+N+  FA  LS     +N+  AM  YPSSVLV  G + +F +   +GT  I  L    NA S FS     +  AR W++ D + RLQE  VHLTA+AEYVLR        +   +   + L+  +   ++ET  + Q VL+    + + D+ E +A  CL  A+  AH++V+ G A AGR+ GKK+ N   R++V    ++    +V D  +  +  ++ EI+        LD+  F  +M ++LR V+ +Y  +G   F
Sbjct:  245 LKENPARK---RINVAPAIVIGENVTFWLGGQRFWDNIVRFARMLSLWGSYENVLWAMELYPSSVLVNTGFRPLFEKNKKLGTKPIACLLPYPNAFSEFS-ASKVHSTARNWYKDDCFTRLQETAVHLTAIAEYVLRCAFISRKSSDVMKSFMDFLTTRIT--MIETGSNSQLVLRGSKGL-LRDMPEEEADMCLRMAMKAAHNAVVRGLAVAGRKKGKKKQNLEARQKVDLLQIQSIPAQVSDILIANLELSLMEILGGKTECQILDSDEFEFRMKRVLRGVQYLYQTVGVKFF 532          
BLAST of Gcaud2666.t1 vs. uniprot
Match: A0A2V3IJ48_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ48_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 2.500e-29
Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   19 KATARKISTRVNVRIDFDEGRHWWKGDFRFWENVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRIRRLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVLRSVH 154
            ++ AR +  + NV I  +E   +WK + R WEN+  FA KL  D K  NI DAM RYPSS+LV+ G+K  FGR M++   +  R   +KNA+++FSP GS    ++ WFE +   R+Q+MVVH+ AV+EYVLR  +
Sbjct:   97 RSLARHVLGKQNVVIAMNE-IDYWKAESRLWENIYAFAVKLPGDGKENNILDAMSRYPSSILVYRGVKYFFGRKMVIAGRKTPRFSLTKNALAIFSPSGSEESLSKKWFESNTLSRMQKMVVHMCAVSEYVLRCAY 231          
The following BLAST results are available for this feature:
BLAST of Gcaud2666.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ICL9_9FLOR3.710e-4035.46Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3ICI1_9FLOR1.230e-3731.63Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3ICP7_9FLOR9.510e-3635.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXK5_9FLOR4.960e-3234.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC00_9FLOR5.390e-3233.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJ48_9FLOR2.500e-2944.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_558_length_22134_cov_4.093136contigNODE_558_length_22134_cov_4.093136:14544..15530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2666.t1Gcaud2666.t1Gracilaria caudata M_176_S67 malemRNANODE_558_length_22134_cov_4.093136 14544..15530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2666.t1 ID=Gcaud2666.t1|Name=Gcaud2666.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=329bp
MDSQLKEKGRNSNLVLLKKATARKISTRVNVRIDFDEGRHWWKGDFRFWE
NVCGFAAKLSEDNKGKNIFDAMRRYPSSVLVFNGLKTVFGRYMMVGTSRI
RRLPRSKNAMSMFSPVGSCNEGARGWFELDAYGRLQEMVVHLTAVAEYVL
RSVHNFYSQNTTTQGDWNRLSFVVDEHVVETALDHQTVLKLRNVVDVGDL
AEYKACSCLYRAVAVAHSSVIEGAATAGRRLGKKRSNGLPRRRVHQCMLR
RPLHEVLDTFVEKITDAVQEIVTDDLDASGFYLQMTKLLRKVERIYMEIG
ADSFQDTSDHQGPSLPPKGMYVFKALKK*
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