Gcaud2665.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2665.t1
Unique NameGcaud2665.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length559
Homology
BLAST of Gcaud2665.t1 vs. uniprot
Match: A0A2V3J0Z4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z4_9FLOR)

HSP 1 Score: 602 bits (1552), Expect = 2.740e-209
Identity = 336/561 (59.89%), Postives = 422/561 (75.22%), Query Frame = 0
Query:    1 MIPEAKISRRARSSQVSFITPCLLSPSSRSTFNGQYPNVALKRNFVSHKLQRNTFQKPNVFCLAAKPNHDSRLRSPLRESPSAVNS---LKNVFIAFTAGLAVLLPRQVIAKQSVITITDQVPNFTLPSQEEALRRDNSQQSILVKTLNGAKKVAPAVLITGASLWALNAVYKRAQQQRLRDFQEQLRSSSSEAFGSSSLFQGNSVSDSLRASTKPPQKQNRFKFRNRSDSQSEGQDMSSQVKLEIFQAKDKAEAEEAENKVYEGIEDAVPTSALERAIDEYIAGDFSKDPEARKTALTEVSQARQASGLSERAFRSVAEAYLSRTISANLDRAIASLSFDESESLRNLCSAVKIIDDAEDLDKSLKLNYNGIHRGNDAEKEDLYRRYAVHCFTDQQQLEVEILRLQKLQNLLKIDQRRSEALMADVSKVMFQVAVSAAMMDGEGKDANMDSVKGLYESFSKLVDEESAESITSEVAVMRIMYALQMLLQQEGALKDVEGFGKMCQELGVDIDELISRVGVLEKTMGADATQFVDELREIVKTAGEDYIDSNQGQKTPASE 558
            M+ +A+ S+R R S  +F+ PC L+ S  S+F GQ  +   +R   SH  Q    ++  + CL+    H++  RSP    PS  N    LKN   A  AGLAV +PR  IAKQSVITITDQVPNFTLPSQ E+LRR++  QSI+VKTLNGAKKVAP VL+   S WAL  +Y R QQQRL+DFQ+QLRSSS E   +S   + + V      S   PQ Q R+KFRN  D ++  +++SS+VKL+IFQ ++ +      N  YEGI DA PTS  ERAIDE+I  DF+  P+ RK+AL +++  R +SGLS  A RSVAEAY+SR +SA +DRA+ SLSFDE ES+RNL +AV+I+D AE++DK+ KLNY GIHRG ++EKE+LYRRYAVHCFT++ +L+VEI+RLQKLQ+LLKID+ RSEA++ADVSKVMFQVAVS AM+DGE K+ANMDSVK LYESF  LVD++SA+SITSEVAVMRIMYALQMLLQQEG+LKD+E FG+MCQELGVDIDELISRVGVLEKTMGADATQFVDELR+IVK AG++  + +  +KTPA++
Sbjct:    1 MLSDARRSKRERPSHYAFLAPCSLATSCHSSFLGQRRSRLCRRIASSHVHQHAQNRRATIRCLS---KHNAN-RSPQPSPPSPFNVFRILKNALFATAAGLAVFVPRNAIAKQSVITITDQVPNFTLPSQAESLRRESGGQSIVVKTLNGAKKVAPVVLVGVGSAWALKNMYTRVQQQRLKDFQDQLRSSSYEGLNTSLFSKDSDVDQGATTSAYSPQSQARYKFRN-VDGRNSDRNLSSKVKLDIFQTREASMKSNVSNASYEGIVDASPTSPFERAIDEFITKDFTSMPDDRKSALADIANLRDSSGLSGTAARSVAEAYVSRAVSAKIDRAVVSLSFDEVESVRNLIAAVEIMDAAEEIDKAAKLNYIGIHRGKESEKEELYRRYAVHCFTNESKLDVEIMRLQKLQDLLKIDRARSEAILADVSKVMFQVAVSQAMVDGEDKNANMDSVKELYESFGSLVDQDSADSITSEVAVMRIMYALQMLLQQEGSLKDIEKFGQMCQELGVDIDELISRVGVLEKTMGADATQFVDELRDIVKAAGDNQNEVDSAEKTPATD 556          
BLAST of Gcaud2665.t1 vs. uniprot
Match: R7QEW5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEW5_CHOCR)

HSP 1 Score: 263 bits (671), Expect = 3.290e-77
Identity = 178/475 (37.47%), Postives = 268/475 (56.42%), Query Frame = 0
Query:   80 SPSAVNSLKNVFIAFTAGLAVLLPRQVIAKQSVITITDQVPNFTLPSQEEALRRDNSQQSILVKTLNGAKKVAPAVLITGASLWALNAVYKRAQQQRLRDFQEQLRSSSSEAFGSSSLFQGNSVSDSLRASTKPPQK-----QNRFKFRNRSDSQSEGQDMSSQVKLEIFQA------KDKAEAE----EAENKVYEGIEDAVPTSALERAIDEYIAGDFSKDPEARKTALTEVSQARQASGLSERAFRSVAEAYLSRTISANLDRAIASLSFDESESLRNLCSAVKIIDDAEDLDKSLKLNYNGIHRGNDAEKEDLYRRYAVHCFTDQQQLEVEILRLQKLQNLLKIDQRRSEALMADVSKVMFQVAVSAAMMDGEGKDANMDSVKGLYESFSKLVDEESAESITSEVAVMRIMYALQMLLQQEGALKD-VEGFGKMCQELGVDIDELISRVGVLEKTMGADATQFVDELREIV 538
            SP ++ S  +V     A +A+ LP     K S IT+TDQVPNFTLPSQE A  R  S   +L++ +  AK+  PAV +   ++W + +V +RAQ++ LRDFQ QL S SS+    ++        DSL  S    ++       R+KFR  S +Q +  D+ S+V+L++F+A      KD A  +    EA +     I    P S +E  I E +    + D  A++ A + ++ AR  +GLSE     + + Y+S  +SA +DRA  +L  D+ ESLR L      +  A+ L     L Y G H G +  +E+LYRRYAV C + +++++ ++  L  +Q LL +   R+E +  +++K MFQVAVSAAM DG     + D+++ L +SF   +D  SA+SI SEVAVMR MY+LQ LLQ++G   D V    KMC+ELGVDIDE++     L   +G +A +FV+ LR ++
Sbjct:   41 SPPSLLSRLSVSAIALAAVALPLPSLAARKHSNITMTDQVPNFTLPSQEAATDRGRSANPLLLRVVFVAKRAVPAVAVIALAVWGVRSVLRRAQERELRDFQTQLSSFSSQLDLDANSTAAGGEKDSLLDSANTAKQILETSSKRYKFRADS-TQEKDDDIESKVRLDLFRAGGSANPKDAANTQMPPAEAPDAAKAEISQVQPASPMESTIAECLKQVEAGDDAAKEAAKSSLNAARATAGLSESEGAKLFDTYVSSVVSAQIDRAAINLDSDDRESLRYLHQLAVTMGAAKALGPDAALRYVGEHAGEEKTREELYRRYAVFCLSSEERVKDDLQSLVDMQTLLAVTDARAETINTEIAKGMFQVAVSAAMADGSLDPGSRDALEKLKQSFGDFLDGGSADSIMSEVAVMRAMYSLQQLLQEQGVSDDDVLELRKMCKELGVDIDEMLQNADTLGDALGPEAKEFVESLRGLL 514          
BLAST of Gcaud2665.t1 vs. uniprot
Match: A0A1X6PHM8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PHM8_PORUM)

HSP 1 Score: 119 bits (299), Expect = 1.590e-26
Identity = 87/292 (29.79%), Postives = 146/292 (50.00%), Query Frame = 0
Query:  280 IAGDFSKDPEARKTALTEVSQARQASGLSERAFRSVAEAYLSRTISANLDRAIASLSFDESES---LRNLCSAVKIIDDAEDLDK--------------------SLKLNYNGIHRGNDAEKEDLYRRYAVHCFTDQQQLEVEILRLQKLQNLLKIDQRRSEALMADVSKVMFQVAVSAAMMDGEGKDANMDSVKGLYESFSKLVDEESAE--------SITSEVAVMRIMYALQMLLQ-QEGALKDVEGFGKMCQELGVDIDELISRVGVLEKTMGADATQFVDELREIVK 539
            +A  FS          + +  A  A+G    A R+  +AY S  +SA +D A   +  D   +   +  L +A   I  A  L +                     LKL Y G ++G  A++E+LYRRYAV C + +Q++  ++  L  +Q LL +   R+EA+  D++K MF VAV+AAM DG+  + N   ++ L +SF  L+D + A         +       ++ M ALQ LL+ Q+   +DV    ++C+++GVDID++++    +   + A+A QFV+ LR ++K
Sbjct:    3 VAAAFSSTSSDSSAVASGLRSAIVATGTEVSASRTAFDAYASALVSATIDSAAGDVGNDAKGATALMDRLAAASAAITRASVLSRVLYGDGGAAAAAGGKDAPPVPLKLTYVGAYKGAAAQQEELYRRYAVWCLSSEQRVSSDVQSLVDMQTLLGVSDARAEAINTDIAKGMFDVAVNAAMADGDLDEENRKQLQVLKDSFGDLLDGDPAAVAGGAPGAAPADSATALKTMGALQELLKHQQVTSEDVAELRRLCKQMGVDIDDMLASADAMGSQLPAEAKQFVESLRGLLK 294          
BLAST of Gcaud2665.t1 vs. uniprot
Match: M2W691_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W691_GALSU)

HSP 1 Score: 115 bits (288), Expect = 5.910e-24
Identity = 72/208 (34.62%), Postives = 120/208 (57.69%), Query Frame = 0
Query:  338 DESESLRNLCSAVKIIDDAEDLDKSLKLNYNGIHRGNDAEKEDLYRRYAVHCFTDQQQLEVEILRLQKLQNLLKIDQRRSEALMADVSKVMFQVAVSAAMMDGEGKDANMDSVKGLYESFSKLVDEESAESITSEVAVMRIMYALQMLL-QQEGALKDVEGFGKMCQELGVDIDELISRVGVLEKTMGADATQFVDELREIV-KTAGE 543
            D+ E L    +   I   A DL     L Y+G    N+ E E  YR  A+H F+ + +++  + +L  +Q  LK+   +   L  +V+K +FQVAVS  + +G+  D + ++++ L  SF+K++D ESAE+I SEV +MR+MYALQ +L +Q+   +D++    MC++LGVD++ L+     +   MG    +FV +LR  + KT+ E
Sbjct:  257 DQLEKLETFSNQSSI---ASDLSDEHWLKYSGT--ANEKEVEAAYRLLAIHFFSSESRIKDGMEKLPFVQRYLKLSDEKFHNLNQEVAKAIFQVAVSNTLSEGKLDDESREALETLKRSFTKMIDNESAENIISEVGLMRVMYALQQILKEQQFGDEDIQMLKSMCEQLGVDLESLLKTAEDMGDNMGPQVKEFVHQLRSFLSKTSKE 459          
The following BLAST results are available for this feature:
BLAST of Gcaud2665.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J0Z4_9FLOR2.740e-20959.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEW5_CHOCR3.290e-7737.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PHM8_PORUM1.590e-2629.79Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2W691_GALSU5.910e-2434.62Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableCOILSCoilCoilcoord: 403..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_558_length_22134_cov_4.093136contigNODE_558_length_22134_cov_4.093136:12261..13937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2665.t1Gcaud2665.t1Gracilaria caudata M_176_S67 malemRNANODE_558_length_22134_cov_4.093136 12261..13937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2665.t1 ID=Gcaud2665.t1|Name=Gcaud2665.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=559bp
MIPEAKISRRARSSQVSFITPCLLSPSSRSTFNGQYPNVALKRNFVSHKL
QRNTFQKPNVFCLAAKPNHDSRLRSPLRESPSAVNSLKNVFIAFTAGLAV
LLPRQVIAKQSVITITDQVPNFTLPSQEEALRRDNSQQSILVKTLNGAKK
VAPAVLITGASLWALNAVYKRAQQQRLRDFQEQLRSSSSEAFGSSSLFQG
NSVSDSLRASTKPPQKQNRFKFRNRSDSQSEGQDMSSQVKLEIFQAKDKA
EAEEAENKVYEGIEDAVPTSALERAIDEYIAGDFSKDPEARKTALTEVSQ
ARQASGLSERAFRSVAEAYLSRTISANLDRAIASLSFDESESLRNLCSAV
KIIDDAEDLDKSLKLNYNGIHRGNDAEKEDLYRRYAVHCFTDQQQLEVEI
LRLQKLQNLLKIDQRRSEALMADVSKVMFQVAVSAAMMDGEGKDANMDSV
KGLYESFSKLVDEESAESITSEVAVMRIMYALQMLLQQEGALKDVEGFGK
MCQELGVDIDELISRVGVLEKTMGADATQFVDELREIVKTAGEDYIDSNQ
GQKTPASE*
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