Gcaud7768.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7768.t1
Unique NameGcaud7768.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length227
Homology
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BLAST of Gcaud7768.t1 vs. uniprot
Match: R7QRN7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRN7_CHOCR)

HSP 1 Score: 97.1 bits (240), Expect = 2.170e-21
Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 0 
Query:   87 RHTSMRPVAEYEANYINAAGYWLSFHEASIALRQEALEANKEDDAKKLDVWAIISVKYALRVLRLRVEFYKMAAEDPTHAKLVLPVLEKKGDIAAADDLEESMGKLESHMATQLMKAVATLHASNA 212
            R+ + RP+       +  A  WLS  +   + R        +D A   D W+ ++V+Y LR+  LR EFY+M   DPT+AKLV+P LE++ ++ AADDL E M KLE+H+ +QLMKAVATL+A NA
Sbjct:   45 RYLNTRPIT-----LVQPATGWLSVKQRWYS-RTTPSRKKGDDKALLYDFWSQMAVRYGLRIAGLRCEFYRMVPRDPTYAKLVMPSLEQRNELPAADDLVEPMEKLETHICSQLMKAVATLNARNA 164
The following BLAST results are available for this feature:
BLAST of Gcaud7768.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QRN7_CHOCR2.170e-2143.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1013_length_15067_cov_4.541066contigNODE_1013_length_15067_cov_4.541066:858..1538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7768.t1Gcaud7768.t1Gracilaria caudata M_176_S67 malemRNANODE_1013_length_15067_cov_4.541066 858..1538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7768.t1 ID=Gcaud7768.t1|Name=Gcaud7768.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=227bp
MSIFASSLSDACALLEKAKKMRTGSTLEDAGIESAYMTSYAKVARRCRDD
KDFGLTRYPYEQGPTVQAFNGGFFAHREWPVRRHLERHTSMRPVAEYEAN
YINAAGYWLSFHEASIALRQEALEANKEDDAKKLDVWAIISVKYALRVLR
LRVEFYKMAAEDPTHAKLVLPVLEKKGDIAAADDLEESMGKLESHMATQL
MKAVATLHASNATKRSGARGSSAKDQ*
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