Gcaud2030.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2030.t1
Unique NameGcaud2030.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length632
Homology
BLAST of Gcaud2030.t1 vs. uniprot
Match: A0A2V3IID9_9FLOR (Signal recognition particle subunit SRP68 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IID9_9FLOR)

HSP 1 Score: 861 bits (2224), Expect = 1.370e-309
Identity = 441/592 (74.49%), Postives = 506/592 (85.47%), Query Frame = 0
Query:   41 VADAQPASENGVKPSAEKVALPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCHDVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKSAAVEAYDKLFMKYNDAVKVVADELSQFRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRNKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAEEAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFPREVSNAEPQEAEQAQDTSEQQQAPLSTFSA-TTTRIGRWWSGKG 631
            VA  +  S NG    A K++L +LSDIT AQ++HGLKHAD+LRYRRYCTRRLS               HHRYHA P+T+EKI  N+R+LQIPLVLAEREWAFAMDVKREQ AGP R RRTI+AKLSRAVHHA+H AALC  VAD+STV EAEAY K+MIAALALEREQW +ALHAY++  KIYTGMAG+RAGTAAA LFEKRLEDV Q IRFC YNL+RSSG  DE LLQ LR+DA+ SQD+LS+KIE AL+EARKRAA+SFG+VTWCG+T+PLRAERVREAVLMASEESK+FSQKSA V+AYDKLF+KYNDAVKVV+DEL+QFRSSSAAADDRI ELE+L+AYLTF+RLQHTISRNLLLV SY++KR+SKPEDFVRLFDNLIANMND+LALKGV+NDAQ+A D+E RR LFRAHRCYHLAQCY AAHMQ EAAAL+DRVAVHAKAL+GKY EEAQ VV ESKGLKCRAVAEAYI+E +LA+ ++DM +SEK +YV TKRMIDHLD+ E FAP+ D+NRVICDMPP+LEAIPCKPVLFDLAIDGIRFP +V   E  + +  +  S+  Q  LS+FSA T+TR+GRWWSGKG
Sbjct:    4 VAAPEAPSLNG---GALKISLAVLSDITAAQSSHGLKHADHLRYRRYCTRRLSRLRSATNTSNKHPGHHHRYHACPITVEKILSNERSLQIPLVLAEREWAFAMDVKREQAAGPSRTRRTILAKLSRAVHHAEHFAALCRQVADDSTVLEAEAYAKTMIAALALEREQWATALHAYESATKIYTGMAGMRAGTAAASLFEKRLEDVAQGIRFCKYNLARSSGQTDETLLQGLREDASASQDLLSDKIETALSEARKRAALSFGDVTWCGVTIPLRAERVREAVLMASEESKLFSQKSAGVDAYDKLFLKYNDAVKVVSDELAQFRSSSAAADDRIEELEHLIAYLTFSRLQHTISRNLLLVQSYKSKRSSKPEDFVRLFDNLIANMNDVLALKGVENDAQVAGDSESRRKLFRAHRCYHLAQCYQAAHMQKEAAALYDRVAVHAKALSGKYGEEAQAVVNESKGLKCRAVAEAYIRETELANRVKDMSISEKGAYVSTKRMIDHLDACESFAPSADSNRVICDMPPALEAIPCKPVLFDLAIDGIRFPGDVPRPEQADTQADKVVSDSSQGGLSSFSAMTSTRLGRWWSGKG 592          
BLAST of Gcaud2030.t1 vs. uniprot
Match: R7QME6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QME6_CHOCR)

HSP 1 Score: 469 bits (1208), Expect = 2.110e-158
Identity = 241/409 (58.92%), Postives = 320/409 (78.24%), Query Frame = 0
Query:  226 MAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADE-ALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKSAAVEAYDKLFMKYNDAVKVVADELSQFRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRNKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAEEAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEK-SSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFPREVSNAEPQEAEQAQDTSEQQQAPLSTFSA-TTTRIGRWWSGKG 631
            MAG+RAG++ A L+EKRLE+V+Q IRFC Y+L R  G A+E ALLQ +R +  +  D+L+EKI+ AL EAR++ A SFGEV WCG++V LRAE+VREAVLM  +E+++F ++ A+++AYDKLFM Y+DA+KVV DEL+ FR S AA +DR+ ELEYLVAY+++ RLQ T+ RNLLLV+S+RNKRASKP+DFVRL+DNLIANM D+LAL GVD DA ++N AE RR LFRAHRC+HLAQCY AA ++ EAAALFDRV+ HAKAL G +A+EA ++V ES G+KCRA A+A++ E +LAS++    +  K +++V   +M+DHLD+FE FA   D  RVIC+MPP+LEA+PCKPV+FDLAIDG+RFP E    E +  E+ +D +E   AP + F    +TR+GRWWSG+G
Sbjct:    1 MAGVRAGSSGAALYEKRLEEVNQGIRFCKYHLKRGEGSAEEEALLQEMRKE-KEGGDVLAEKIQKALLEARRKMAESFGEVVWCGVSVQLRAEKVREAVLMVDQENEMFGER-ASLDAYDKLFMVYHDALKVVTDELNDFRKSGAA-EDRVRELEYLVAYVSYQRLQRTVERNLLLVESFRNKRASKPDDFVRLYDNLIANMTDVLALPGVDADAAVSNQAEARRRLFRAHRCFHLAQCYQAAKLEGEAAALFDRVSDHAKALKGAHAKEAAKIVTESTGMKCRAKAQAFLNEQELASAVEGFDIKAKDAAFVQKLKMVDHLDAFESFANPRDPTRVICEMPPALEAVPCKPVMFDLAIDGVRFPGEEERVEAKPVEE-KDKAETAPAPATAFQPLASTRLGRWWSGQG 405          
BLAST of Gcaud2030.t1 vs. uniprot
Match: A0A6T6CZ51_9RHOD (Signal recognition particle subunit SRP68 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CZ51_9RHOD)

HSP 1 Score: 275 bits (703), Expect = 1.330e-80
Identity = 192/560 (34.29%), Postives = 283/560 (50.54%), Query Frame = 0
Query:   57 EKVALPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCHDVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDAD--EALLQS-----LRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKSAA---VEAYDKLFMKYNDAVKVVADELSQFRSSSA-AADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRNKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAEEAQ-----RVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFP--REVSNAEPQE 598
            E+++L IL  +  +QN +GL+H DY RYR+YCTRRL                  R+     T+ +   + R + + LV AER W+ AM++K         AR     ++ +A + A+ L      VADE T  EA+AY   M A  +  RE W SAL  +    +IY GMA    G     LF +R+E++D +IRFC YN+  ++G     + +L S         A+ S D+L+ ++E+AL +  K        + WCG  +PLR+ +VREAVL A +E     ++  A      YDKLFM YNDA ++V  EL + R+ +A  +++R  EL YL  YL+  RL HTI RNLL+V    +  A   E  +RLFD LI N ++IL L GV+    +  +A  +   FRA RC  LA CY+ +    EA+ALF R A   + +  + A++        +++E + L+CR VA    +   L S     KL+   S      +   LD FE         + +  +PP   ++  KP+LFD+A D I FP   E S   P E
Sbjct:   28 ERLSLDILRCVKTSQNTYGLRHGDYRRYRQYCTRRLHRIRKTLNFMNGKK----RFQKRVPTVTQFAKDPRFMMLTLVQAERAWSHAMELKNAMQVTARTARHAT-TRMVKAAYWARELEKAARSVADERTSLEAQAYASLMAANASFVREDWKSALQTFMVARRIYEGMANRLDGDDGG-LFRQRVEEIDPSIRFCEYNVHGANGTISSIDGVLGSPAGLGKSGPASPSLDLLTAQLESALADRVKSHVEDLATIEWCGSQIPLRSVKVREAVLGAKQEEFALDEEDDADRKTALYDKLFMAYNDASRLVQRELDELRADAAITSEEREKELTYLRGYLSHARLSHTIKRNLLIVRELESHGAGAGES-LRLFDTLIHNASEILELPGVNEKTDVHRNASFQIAAFRAGRCRGLAYCYMESQRYREASALFLRSAARFEEVDAQLAKDQLGFDILALIEECRALRCRCVA-LQSQAASLVSHALQTKLNLDGSSKSASDLYHGLDVFE-------PRQTLVQIPPPYGSVASKPILFDIASDTIGFPDLAEASKVAPSE 572          
BLAST of Gcaud2030.t1 vs. uniprot
Match: A0A5J4Z9R2_PORPP (Signal recognition particle subunit SRP68 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9R2_PORPP)

HSP 1 Score: 261 bits (668), Expect = 3.630e-75
Identity = 190/570 (33.33%), Postives = 288/570 (50.53%), Query Frame = 0
Query:   56 AEKVALPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQ-HNQ-RALQIPLVLAEREWAFAMDVK---REQPAGPHRARRTIIAKLSRAVHHAQHLAALCHDVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVF------SQKSAAVEA----YDKLFMKYNDAVKVVADELSQFRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRNKRA------SKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAEEAQRVVKESKGL-------------KCRAVAEAYIKEHQLASSM-RDMKLSEKSSYVG--TKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFP 588
            A+KVAL IL     AQ  HGLKH DY RYRR+C+ ++                  ++    VT + I  H Q RAL + L  AER W+++M++K     +P  P + RR  I KL RAV +AQ L   C + A++ T  EA+AY   M   L LERE W  AL  + N   +Y GMA +      + ++  R+E++  +IRFC Y+L   S  A +  L  L +++  + D+L  KI+ AL E RKR A SFG + W G  V +R+ER REAVL A E           S  S ++E     YD +F   N++++ V   + + ++    + DR+ E+  + ++L+F++    I RN LL++  R   +      ++PEDFVRL++ L+    D+L L GV     I++      T FRA RC++LA CY       EA  L DR            +EEA R V++ + L             K R +AE Y  +  L++ + R M +S+ S       K +   LD        P   + +  +PP ++ + CKP++FDLA+DG++FP
Sbjct:   21 AQKVALHILGVSKAAQQTHGLKHGDYRRYRRFCSGKIHHLRRILKLTNGRGQ---KFVKREVTTDVITVHGQVRALDLILWQAERSWSYSMEMKDLESNKPEQPQKMRRLAIRKLKRAVLYAQQLHDFCVETAEDRTRLEADAYVAWMKGNLYLEREMWAEALEHFVNASGLYEGMANVLESDPDS-VYRSRVEEISPSIRFCKYHLGLRSDGARKDDLVKLMNESGLANDLLKAKIDVALAEERKRLAQSFGTIDWLGKQVAMRSERTREAVLAAREAEASLRDEMGKSSASLSLEEKAALYDGVFSILNESIQGVQRVVRELKNDEKESADRVQEVVDVASFLSFSKNLLLIERNQLLIEILRTPSSKTKSSTTRPEDFVRLYETLVQVTRDMLELPGVSEFTPISDRLNSNLTAFRALRCHYLALCYADLKSYKEAVGLLDRAI--------GLSEEAIRCVQDEEVLAQLHANVDSCVRDKMRVLAENYRDQVALSNGVDRSMSISKTSGRGSGAAKSLYADLDQ-------PRGAQDVIPVPPEIQPVMCKPLVFDLALDGVQFP 571          
BLAST of Gcaud2030.t1 vs. uniprot
Match: A0A7M7GKA6_STRPU (Signal recognition particle subunit SRP68 n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7GKA6_STRPU)

HSP 1 Score: 248 bits (633), Expect = 2.660e-70
Identity = 166/562 (29.54%), Postives = 289/562 (51.42%), Query Frame = 0
Query:   61 LPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCH-DVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQK----SAAVEAYDKLFMKYNDAVKVVADELSQFRSSSAAA---DDRITELEYLVAYLTFNRLQHTISRNLLLVDSYR---------------NKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKY---------AE--EAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFP 588
            L +LS I ++Q  HGL+H DY RYR YCTRRL                 +++    +  E+I  + R L +PLV AER WA+AM +K E    P R R  ++++L +AV  A  L AL   D  D  +  EA+AY+  M   +  E E+W + +        IY  +A       +A ++ +R+E++  +IR+C YN+       DE+ +  L     +S   +S  I++ L + R++ A +  EVTW G TVP+R E+VR  +L   E  +  S +     + V  Y+ L M+  D+++++ +EL    ++ A     D  ++  +YL  YLT+ RL  TI RN+LL ++ +               N++ +KP+D +RL D ++ N+++I  L G++ D ++  + E +   F+A+RC++LAQ Y  A   +EAAALF+R    A++   ++         AE  E   ++++  G+K  A A + +   ++  SM  + ++  SS   ++ + + L  +   +        +   PP+ + +PCKP+ FD+A++ + FP
Sbjct:   22 LEVLSIIKESQLQHGLRHGDYQRYRSYCTRRLRRVRKSLKFSYGNR---NKFVKRQIK-EEIVKDVRFLYLPLVCAERSWAYAMQLKTEGNTEP-RKRFHVMSRLRKAVKFAAELEALSQSDKCDARSKLEAKAYFGYMKGMVLFEEEKWENCIETLSEAKTIYEKLASALNEEQSA-IYLQRVEEISPSIRYCAYNIG------DESAINDLVKMRLKSGGQMSTNIDSLLAQTREKQAATLSEVTWRGRTVPVRNEQVRAFLLTCQENEQQVSSEITDSESKVSVYESLLMQCKDSLQIIREELKADPNAKAKGQRQDGPVSTTQYLHTYLTYIRLTRTIERNILLAETLKANLQTREDGGEQESANQKRTKPQDLIRLCDIILQNLSEIPQLPGLEGDVELQQEVEAKTLKFKAYRCFYLAQSYSQAKKWTEAAALFERAMSRAESSRKEWKAIKSISVKAELTELDELIQQINGVKYSAHAASILDSSEVNESMAKLNITASSSSDTSRPVSERLGDYRPASEVDPTKPNLVAFPPAFKPVPCKPLFFDIALNHLEFP 571          
BLAST of Gcaud2030.t1 vs. uniprot
Match: A7SU98_NEMVE (Signal recognition particle subunit SRP68 (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7SU98_NEMVE)

HSP 1 Score: 247 bits (630), Expect = 3.950e-70
Identity = 166/573 (28.97%), Postives = 282/573 (49.21%), Query Frame = 0
Query:   63 ILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCH-DVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQD-ILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKS---AAVEAYDKLFMKYNDAVKVVADELSQFRSSSAA----ADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRN------------------KRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAE---------EAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFPREVSNAEPQEA 599
            +L  I + Q+ HGL+H DY RYR+YC RRL                 H +    +T E ++ + + L IPL+  ER W+ AM++K      P R R  +I +L +A  HAQ L  LC  D+ D  T  EA+AY   M  +++ E + W  AL  +     IY  +AG  +      ++ +R+E++   IR+C YNL  S  D ++ L+Q     A   QD +L+ KI+  L + R++ A +  EV WC  T+P+R E+VR  +L A + ++   +       +E Y+ L ++  DA++ + D+L     S        + ++  L++L  Y+T+ +L  TI R LLL +S +N                  K+ +KPED VR++D ++ N++D+  L  V++D ++  +   +   ++A+RC+++A  YL A    EAA L+DRV  HA +    + E           Q +   S+G KC A A + +   ++   +    + +K+       + + LD +            +   PP  + +PCKP+ FDLA++ + FP      E ++A
Sbjct:    1 VLPVIKENQSQHGLRHGDYQRYRQYCARRLRRLYKTLHFQHGSR---HAFKPKKLTKELVK-DVKFLHIPLMDTERAWSQAMELKLLANTEP-RKRFHLIRRLQKASKHAQDLENLCDGDMCDARTKLEAQAYSSYMKGSVSFELQNWKEALELFGRSRTIYERLAGAFS-EEQRNMYLQRVEEITPNIRYCAYNLGESGTDIND-LMQLRHCSAGGVQDPVLAAKIDEVLAQTREKEAGAMTEVVWCNRTIPVRNEKVRGFILHAQQMARELDRAEDLDGRMELYEDLLLECKDALQAIKDDLKGDLVSEELKVHKTEAQVANLQFLHTYVTYLKLTKTIERYLLLAESMKNQLPANLQDTANGSEPLPNKKLTKPEDMVRIYDIILQNLSDMSELHSVEDDLELTKEIAAQTLEYKAYRCFYIAHSYLLAKKWREAAVLYDRVTSHANSAVSHFRECQNFQSQASRLQDLASLSRGSKCSAHASSILDSEEITDKLASATIEDKT-------LAERLDVYHVDQSLVSKKPHVTTFPPDFQPVPCKPLFFDLALNHVEFPSLAERVETKKA 559          
BLAST of Gcaud2030.t1 vs. uniprot
Match: A0A8B7Y9Y0_ACAPL (Signal recognition particle subunit SRP68 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y9Y0_ACAPL)

HSP 1 Score: 242 bits (618), Expect = 3.940e-68
Identity = 162/565 (28.67%), Postives = 283/565 (50.09%), Query Frame = 0
Query:   61 LPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCH-DVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKS---AAVEAYDKLFMKYNDAVKVVADELSQ---FRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYR--------------------NKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVH----------AKALTGKYAEEAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFP 588
            L +L  I ++Q  HGL+H DY RYR YC+RRL                 ++Y +  +  E I  N R L +PL+ AER WA+ M +K+E    P R R  ++A+L +AV +A+ L  L   D  D  +  EA+AY   M   L  E+EQW   +  +     IY  +A   +      L+ +R+E++  +IR+C YN+       D+  ++ L     +S  ++S  I++ L + R++ A++  EVTW G  VP++ E+VR  +L   E  K     S   + +  Y+ L M+  DA++++ DE+      +  +  +D  I   +YL  YL + RL  TI RN+L+V++ +                    NK+ +KP+D +R++D ++ N+ +I  L G+++D  +  + + +   F+A RC++LAQ Y A+    EA+AL++RV  H           K  T     E + + ++  GLK  A A + +   ++   +  +++++    V ++R+  + D  E     P+    +   PP  + IPCKP+ FD+A++ +  P
Sbjct:   28 LEVLQIIKESQQQHGLRHGDYQRYRSYCSRRLRRIRKSLKFVYGNR---NKYVSRKIKEETIM-NVRFLYLPLICAERCWAYMMQLKQESNTEP-RKRFHLMARLLKAVRYAEELETLSQSDKCDARSKLEAQAYCAWMKGTLYFEKEQWEECIKMFSTAQNIYEKLASTFSEDQRL-LYLQRVEEITPSIRYCAYNIG------DQTAIKDLVQLRLKSGGMMSSNIDSLLAQTREKQALTLSEVTWRGRLVPVKNEQVRAFLLSCEENEKQLKSSSDPESQMSIYESLLMECKDALQILRDEIKADPAVKQRAHKSDGPIPSSQYLYTYLMYIRLTKTIERNMLMVETLKENLPEAGMAVAGPTTQGSTNNKKVTKPQDLIRIYDTILQNLAEIPQLAGLEDDDNLQQEIKAKSLKFKAFRCFYLAQSYTASKKWREASALYERVLKHIETANKEFKRVKGKTKNELAELKHLTQKVNGLKYSAHALSILDSEEITEGVAQLEVTKDKRAV-SERLHKYQDGPELATGKPN----LVPFPPDFQPIPCKPLFFDIALNQVELP 575          
BLAST of Gcaud2030.t1 vs. uniprot
Match: A0A087TLH0_STEMI (Signal recognition particle subunit SRP68 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087TLH0_STEMI)

HSP 1 Score: 239 bits (610), Expect = 4.200e-67
Identity = 164/557 (29.44%), Postives = 281/557 (50.45%), Query Frame = 0
Query:   49 ENGVKPSAEKVALPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCHDV-ADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQK---SAAVEAYDKLFMKYNDAVKVVADELSQFRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRN------------KRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAEEAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKR-MIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFP 588
            E+ V    +   L IL  I DAQ  HGL+H DY RYR YC+R+L                 HR+ A  +T + +  + R L IPL++AER W +AM +K+E    P R R  +I++L +A   A  L +LC     D  T  EA+AY   +  +L  E ++W SA+  ++    IY  ++          L+++R+E++   IR+C YN+   +   D  L++         +D+L   ++  + + R++ AV+  EV W    +P+R E++R  +L   +      Q     A +  Y++L +   DA++VV DE+   +++   ++   + L YL +YLT+ RL  T+ RNLL ++S R             K+ +KP+D VR ++ +I N++++  L+GV++D     + E     ++AHRC+++A+ Y AA+  +EA AL+ R   + +      A + ++++   K L  R     Y   +  + S+   + S  S  V  K+ +I+ LD +   A        I   PP  + IPCKP+ FDLA++ + FP
Sbjct:   20 ESDVNVHQKTFTLEILHIIKDAQQQHGLRHGDYQRYRSYCSRKLRRIRKSLHFSQASK---HRFQAKKITEDTLT-DVRFLYIPLIMAERAWGYAMQLKQEANTEP-RKRFHLISRLRKASKIACDLESLCESSKCDARTKLEAQAYAAWIKGSLFFELQEWQSAMECFRISQTIYEKLSEA-LNEEEIVLYKQRVEELMPNIRYCAYNIGDETAIND--LMKMRLSGKTSGEDMLGADLDHLIAQTREKQAVTLSEVEWRNRKIPVRHEKIRLFLLNVQDSHTQVEQAPNLQAKIAVYERLLLDSKDAIQVVRDEMKD-QTAKGRSEAVHSSLAYLHSYLTYIRLSKTVERNLLFIESLRQNMGSSLDLSLDGKKVTKPQDLVRPYEIIIQNLHEMTQLQGVESDTVFLEETEANILAYKAHRCFYIAEVYAAANKWAEAMALYGRAEEYTQQALKNKALKDKKLMGLLKDLAIRIEGNKY---NAYSLSILGNEDSVPSEAVKEKKNLIERLDQYHEDASLVSQQPKIAQFPPDFKPIPCKPLFFDLALNEVEFP 564          
BLAST of Gcaud2030.t1 vs. uniprot
Match: UPI0018D6176C (signal recognition particle subunit SRP68-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6176C)

HSP 1 Score: 237 bits (605), Expect = 2.960e-66
Identity = 169/607 (27.84%), Postives = 296/607 (48.76%), Query Frame = 0
Query:   61 LPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCH-DVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKS---AAVEAYDKLFMKYNDAVKVVADELS---QFRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLLVDSYR---------------------NKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALT-------GKYAEEA---QRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFPREVSNAEPQEAEQAQDTSEQQQAPLSTFSATTTRIGRWWSG 629
            L +L  I ++Q  HGL+H DY RYR YC+RRL                 ++Y    +  E I  + R L +PL+ AER WAF M +K+E      R R  +++++ +AV +A+ L  L   D  D  +  EA+AY   M   L  E+EQW   +  +     IY  +A          L+ +R+E++   IR+C YN+       DE+ ++ L +   +S  ++S  I++ L + R++ A++  EVTW G  VP++ E+VR  +L   E  K     +   + +  Y+ L M+  DA++++ DE+      +  S A+D  +   +YL  YL + RL  TI RN++++++ +                     NK+ +KP+D +R++D ++ N+ +I  L G+++D  +  + + + + F+A RC++LAQ Y A+    EA+AL++RV  H +  T       GK   E    + + ++  GLK  A A + +   ++   +  + ++     V ++R+  + D  E  A  P+    +   PP  + +PCKP+ FD+A++ I  P              +D  EQ+ A     S  T  +  WW G
Sbjct:   28 LEVLHIIKESQQQHGLRHGDYQRYRSYCSRRLRRIRKSLKFSYGNR---NKYVPRKIKEETIT-DVRFLYLPLICAERCWAFMMQLKQESNT-ELRKRFHLMSRMLKAVRYAEELETLSQSDKCDARSKLEAQAYCAWMKGTLHFEKEQWEDCIKTFSTAKNIYEKLASA-LNEEQQLLYIQRVEEITPNIRYCAYNIG------DESAIKDLVEMRLKSGGMMSSNIDSLLAQTREKQALTLSEVTWRGRLVPVKNEQVRVFLLSCEENEKQLKSSNDPESQMSIYESLLMECKDALQILRDEMKADPSVKQRSQASDGPLPSSQYLYTYLMYIRLTKTIERNVIMIETLKENLPEAGITVAVPQTTQGSTNNKKVTKPQDLIRIYDTILQNLAEIPQLAGLEDDDSLQQEIKAKSSKFKAFRCFYLAQSYTASKKWREASALYERVLKHIETATKEFKKVKGKTKNELSVLKDLTQKVNGLKYSAHALSILDSEEITEGVAQLDITADKRAV-SERLHKYQDGPELAAGKPN----LVPFPPDFQPVPCKPLFFDIALNQIELPS------------LEDKLEQKPAA----SGITGFLKGWWGG 601          
BLAST of Gcaud2030.t1 vs. uniprot
Match: T1J1Y0_STRMM (Signal recognition particle subunit SRP68 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J1Y0_STRMM)

HSP 1 Score: 236 bits (603), Expect = 5.050e-66
Identity = 168/557 (30.16%), Postives = 281/557 (50.45%), Query Frame = 0
Query:   57 EKVALPILSDITDAQNAHGLKHADYLRYRRYCTRRLSXXXXXXXXXXXXXXXHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQPAGPHRARRTIIAKLSRAVHHAQHLAALCH-DVADESTVFEAEAYWKSMIAALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAIRFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAVSFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKSAAVEA----YDKLFMKYNDAVKVVADELSQFRSSSAAA-DDRITELEYLVAYLTFNRLQHTISRNLLLVDSYRN------------KRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRTLFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAK-ALTGK------YAEEAQRVVKESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFECFAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFP 588
            + + L IL  I DAQ  HGL+H DY RYR YCTRRL                 HR+    +T E ++ + + L IPLV+AER W+FAM +K+E      R R  ++ ++ +A  H + L  LC  +  D  T  EA+AY   M   L  E +QW  A+  ++    IY  ++   +      L+ +R++++   IR+C+YN+   S   D   L+ +R      +DIL+ K++A + + R++ A +  EV+W G T+P++ E+VR   L+  +ES+   Q++  +E+    Y+ L M+  DA++V+ DEL    +      +  I+ L +L +Y+ + RL  TI RNLL++   +             K+A+KP++ +RL++ ++ N ++IL L GV  D +       R T F+A R Y++AQ +       EA AL++RV  + K AL  K         E + ++K  +G K  A A + +    +      +     ++ V  K + + LD +            I   PP  +A+ CKP+ FDLA++ + FP
Sbjct:   30 QTLTLEILPIIKDAQMQHGLRHGDYQRYRSYCTRRLRRLRKTLHFMQGNR---HRFQGKKITEEMLR-DVKYLYIPLVMAERAWSFAMQLKQEANT-ELRKRFHLMGRMQKAAKHTEELERLCESNKCDARTKLEAQAYAAWMKGTLQFELQQWQFAMDDFEKALTIYEKLSSALSEEEQI-LYHQRIDEIKPNIRYCSYNIGDQSAIND---LKQMRRAVG--EDILASKLDALIAQTREKQAATLSEVSWRGRTIPVKHEKVR-VFLLNVQESEHEVQRANTLESKISVYESLLMECKDAIQVLRDELKNDPNFKLKTIEGPISSLHFLHSYVVYIRLSKTIERNLLMIRGVKQQQMGSGDRAPDAKKANKPQELIRLYETIVQNYSEILQLPGVSEDTEFTQTLVARITAFKALRSYNIAQLFATNKKWLEAIALYERVQAYCKQALQNKNLLEKDLTCEVEDILKAVEGQKYSAHALSILGTDDVPEQTEKV-----TAIVKKKPLYERLDEYYEDQNLVSKQPNIAPFPPDFKAVACKPLFFDLALNHVEFP 569          
The following BLAST results are available for this feature:
BLAST of Gcaud2030.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IID9_9FLOR1.370e-30974.49Signal recognition particle subunit SRP68 n=1 Tax=... [more]
R7QME6_CHOCR2.110e-15858.92Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6T6CZ51_9RHOD1.330e-8034.29Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A5J4Z9R2_PORPP3.630e-7533.33Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7M7GKA6_STRPU2.660e-7029.54Signal recognition particle subunit SRP68 n=2 Tax=... [more]
A7SU98_NEMVE3.950e-7028.97Signal recognition particle subunit SRP68 (Fragmen... [more]
A0A8B7Y9Y0_ACAPL3.940e-6828.67Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A087TLH0_STEMI4.200e-6729.44Signal recognition particle subunit SRP68 (Fragmen... [more]
UPI0018D6176C2.960e-6627.84signal recognition particle subunit SRP68-like n=1... [more]
T1J1Y0_STRMM5.050e-6630.16Signal recognition particle subunit SRP68 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038253SRP68, N-terminal domain superfamilyGENE3D1.10.3450.40coord: 57..259
e-value: 2.2E-53
score: 183.3
IPR026258Signal recognition particle subunit SRP68PFAMPF16969SRP68coord: 76..584
e-value: 3.0E-105
score: 353.4
IPR026258Signal recognition particle subunit SRP68PIRSFPIRSF038995SRP68coord: 59..629
e-value: 8.5E-94
score: 313.1
IPR026258Signal recognition particle subunit SRP68PANTHERPTHR12860SIGNAL RECOGNITION PARTICLE 68 KDA PROTEINcoord: 49..603
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..615
IPR034652Signal recognition particle subunit SRP68, RNA-binding domainCDDcd15481SRP68-RBDcoord: 62..255
e-value: 4.91666E-45
score: 157.001

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_538_length_22627_cov_4.365637contigNODE_538_length_22627_cov_4.365637:18012..19907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2030.t1Gcaud2030.t1Gracilaria caudata M_176_S67 malemRNANODE_538_length_22627_cov_4.365637 18012..19907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2030.t1 ID=Gcaud2030.t1|Name=Gcaud2030.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=632bp
LTERNSRQHAAFFADDGRGSGDAINGDEEMVAVVSQAESPVADAQPASEN
GVKPSAEKVALPILSDITDAQNAHGLKHADYLRYRRYCTRRLSRLRSATN
ASNKHPSHHHRYHANPVTIEKIQHNQRALQIPLVLAEREWAFAMDVKREQ
PAGPHRARRTIIAKLSRAVHHAQHLAALCHDVADESTVFEAEAYWKSMIA
ALALEREQWPSALHAYQNVHKIYTGMAGLRAGTAAAPLFEKRLEDVDQAI
RFCNYNLSRSSGDADEALLQSLRDDANQSQDILSEKIEAALTEARKRAAV
SFGEVTWCGITVPLRAERVREAVLMASEESKVFSQKSAAVEAYDKLFMKY
NDAVKVVADELSQFRSSSAAADDRITELEYLVAYLTFNRLQHTISRNLLL
VDSYRNKRASKPEDFVRLFDNLIANMNDILALKGVDNDAQIANDAEGRRT
LFRAHRCYHLAQCYLAAHMQSEAAALFDRVAVHAKALTGKYAEEAQRVVK
ESKGLKCRAVAEAYIKEHQLASSMRDMKLSEKSSYVGTKRMIDHLDSFEC
FAPTPDNNRVICDMPPSLEAIPCKPVLFDLAIDGIRFPREVSNAEPQEAE
QAQDTSEQQQAPLSTFSATTTRIGRWWSGKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038253SRP68_N_sf
IPR026258SRP68
IPR034652SRP68-RBD