Gcaud7628.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7628.t1
Unique NameGcaud7628.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length188
Homology
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A2V3J3K4_9FLOR (Coatomer subunit zeta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3K4_9FLOR)

HSP 1 Score: 328 bits (841), Expect = 5.020e-113
Identity = 171/187 (91.44%), Postives = 180/187 (96.26%), Query Frame = 0
Query:    1 MQGLSGVEQPLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSILS 187
            M+GLSGVEQPLVKAVIIINH+GKR+CSRFCDRV WDDQESQRDFEM+LL+KI TMGDLSEGVDVMEFKNFVVAYKQ+DDLLMFVVGG LENELIMAEVLQSLDETL+ITMR QV+EEAVL+NLETVLLVVDELVDQEGVIMESEP ELA RVGQQGGSFI QVPLGEQTLGQALQTARDQITRSILS
Sbjct:    1 MKGLSGVEQPLVKAVIIINHDGKRVCSRFCDRVQWDDQESQRDFEMTLLRKILTMGDLSEGVDVMEFKNFVVAYKQADDLLMFVVGGPLENELIMAEVLQSLDETLSITMRGQVFEEAVLDNLETVLLVVDELVDQEGVIMESEPAELAVRVGQQGGSFIDQVPLGEQTLGQALQTARDQITRSILS 187          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A1X6NT45_PORUM (Coatomer subunit zeta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NT45_PORUM)

HSP 1 Score: 229 bits (583), Expect = 1.040e-73
Identity = 118/180 (65.56%), Postives = 144/180 (80.00%), Query Frame = 0
Query:    7 VEQPLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSIL 186
            V QPLVKAV+I+N +G R+CSRFCD+V W D E++R FE +LLKK+Q +G++S GVD+MEF   +VAY Q DDLLMFV G A ENELI+AEVL SLDE+LNI +R  VYEE VL +L+ VLLV+DELVDQEGV+MES+P EL +R G Q  SFI  VP+GEQTL QALQ A+DQI R+IL
Sbjct:    8 VSQPLVKAVVIVNTKGGRVCSRFCDKVMWPDLETERAFEATLLKKVQALGEISHGVDIMEFGGHIVAYTQCDDLLMFVTGLASENELILAEVLGSLDESLNILLRGLVYEENVLLHLQGVLLVIDELVDQEGVVMESDPVELVSRAGVQSSSFIDNVPMGEQTLSQALQIAKDQIARTIL 187          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A7S1XCA1_9RHOD (Coatomer subunit zeta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCA1_9RHOD)

HSP 1 Score: 171 bits (432), Expect = 7.410e-51
Identity = 96/180 (53.33%), Postives = 129/180 (71.67%), Query Frame = 0
Query:    9 QPLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGV-DVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSILS 187
            QP+VKA++I+N EGKRICSRFCD+  + D  +++  E +++KK+    D  E + DV + ++F+V +KQ DD+L F V    ENE+I+AEVL +LDE + + +  QV+EE +L NL+ +LLVVDELVDQEGVI+E    +L +RVG     F   VPLGEQTL QALQTARDQ TRSILS
Sbjct:    6 QPVVKALLILNAEGKRICSRFCDKSLFPDLAAEKALEEAVVKKVSLSSDGFEAMEDVFDHEDFIVVFKQVDDILYFAVAMNDENEVILAEVLSTLDEAVALLLHHQVFEENLLLNLKKILLVVDELVDQEGVILECNAADLVSRVGLPS-YFADGVPLGEQTLTQALQTARDQFTRSILS 184          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A5J4YNE1_PORPP (Coatomer subunit zeta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNE1_PORPP)

HSP 1 Score: 166 bits (421), Expect = 4.650e-48
Identity = 89/182 (48.90%), Postives = 133/182 (73.08%), Query Frame = 0
Query:    7 VEQPLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQ-VPLGEQTLGQALQTARDQITRSILS 187
            V QPL++ V+IIN +G+R+ +R+CD+  + D ES+R  E +L +K+QT+ +L    D+ E  + V+ +KQ +D+  FVVG A ENE+++ EVL +L   L++ +R+QVY+E +  NL+ VLL +DELVD EGVI+E++  ELA+RVG     ++S  +P+G+QTL QALQ+ARDQITRSILS
Sbjct:   94 VVQPLIRGVVIINADGRRVAARYCDKRRFRDLESERALEGALYRKMQTIPELPNAEDLFEMDDNVIVFKQMEDVFFFVVGDARENEIVLCEVLGALTGALDLLLRQQVYDENMQLNLKLVLLTLDELVDTEGVILETDGIELASRVG--ASPYLSDAIPIGDQTLTQALQSARDQITRSILS 273          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A0U9HJ45_KLENI (Coatomer subunit zeta n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HJ45_KLENI)

HSP 1 Score: 117 bits (294), Expect = 4.310e-30
Identity = 66/177 (37.29%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   10 PLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSIL 186
            P +K +++++ EGKR+  ++ D   W +  +Q  FE S+  K        E  ++  F  ++V YK   DL  +V GG  ENELI+  VLQ+  + +++ +R QV ++ VLENL+ VLL +DE+VD  G+++E++ T +A RV  +G    S +PL EQT+ QA   A++Q+ RS+L
Sbjct:    6 PAIKNILLLDSEGKRVAVKYFDHEDWPNITTQTAFEKSVFTKTSRTAARGEA-EIGMFDGYIVVYKFIADLHFYVTGGDDENELILVTVLQAFFDAVSLLLRSQVEKKTVLENLDLVLLTLDEIVDG-GIVLETDSTIIAGRVAMRGAD--SDIPLSEQTISQAFANAKEQLARSLL 178          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A507BTL6_9FUNG (Coatomer subunit zeta n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BTL6_9FUNG)

HSP 1 Score: 117 bits (294), Expect = 4.430e-30
Identity = 68/175 (38.86%), Postives = 116/175 (66.29%), Query Frame = 0
Query:   12 VKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSIL 186
            VKA+++++ EGKR+ S++    +   +E Q+ FE +L +K +         +++ F   V+ YK + D+ ++VVG   ENELI+  V+Q+  + L + ++ QV + A+ ENL+ VLL +DE +D +G+I+ES+PT++AARV ++     + +PL EQT+ QALQ ARDQ+TR++L
Sbjct:   13 VKALVLLDSEGKRMISKYYTPDYPTIKE-QKSFEKALFEKTK-----KSNSEIIMFDGHVIVYKNTIDVFIYVVGSPDENELILMSVMQAYYDALGLLLKTQVEKRAINENLDVVLLALDETID-DGIILESDPTQIAARVTRRSDEATN-IPLAEQTISQALQNARDQLTRTLL 179          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A507DRM2_9FUNG (Coatomer subunit zeta n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DRM2_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 8.840e-30
Identity = 67/175 (38.29%), Postives = 117/175 (66.86%), Query Frame = 0
Query:   12 VKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSIL 186
            VKA+++++ EGKR+ S++  + +   +E Q+ FE +L +K +T        +++ F   VV +K S D+ ++VVG   ENELI+  V+Q+  + L + ++ QV + A+ ENL+  LL +DE +D +G+I+ES+PT++++RV ++       +PL EQT+ QALQ+ARDQ+TR++L
Sbjct:   13 VKALVVLDSEGKRMLSKYYSQDYPSIKE-QKAFEKALFEKTKT-----SNCEIIMFDGHVVVFKNSIDVFIYVVGSPDENELILMSVMQAYYDALGLLLKTQVEKRAMNENLDVALLALDETID-DGIILESDPTQISSRVTRRSDEA-QNIPLAEQTISQALQSARDQLTRTLL 179          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A6P6UIS7_COFAR (Coatomer subunit zeta n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6UIS7_COFAR)

HSP 1 Score: 116 bits (291), Expect = 1.150e-29
Identity = 67/177 (37.85%), Postives = 107/177 (60.45%), Query Frame = 0
Query:   10 PLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSIL 186
            PLVK +++++ EGKR+  ++C    W    ++  FE ++  K Q     +E  +V  F+N++  YK   DL  +V GG  ENELI+A  LQ   + + + +R  V ++  LENL+ +LL +DE+VD  G+I+E++   +A +V     S  +  PL EQT+GQAL TAR+ +TRS+L
Sbjct:    5 PLVKNILLLDSEGKRVAVKYCSD-DWPTNSAKEAFEKAIFNKTQKTNARTEA-EVTMFENYIAVYKFVQDLHFYVTGGEDENELILASALQGFFDAVGLLLRGNVDKKEALENLDLILLCLDEIVDG-GIILETDANVIAGKVAS--NSIDAGAPLSEQTIGQALATAREHLTRSLL 176          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A0D6QZW3_ARACU (Coatomer subunit zeta n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QZW3_ARACU)

HSP 1 Score: 116 bits (291), Expect = 1.180e-29
Identity = 67/178 (37.64%), Postives = 106/178 (59.55%), Query Frame = 0
Query:   10 PLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSILS 187
            P+VK +++++ EGKR+  ++     WD   ++  FE S+  K Q     +E  ++  F  ++V YK   DL  FV GG  ENELI+A+VLQ   + ++I +R  V +   LENL+ +LL +DE+VD  G+++E+EPT +  RV  +G       PL EQT+ QA   AR+ + RS+L+
Sbjct:    6 PVVKNILLLDSEGKRVAVKYYTD-DWDTLAAKLAFEKSIFTKTQRSNARAEA-EIGMFDGYIVVYKFISDLHFFVTGGENENELILAQVLQGFFDAVSILLRTNVEKRTALENLDLILLCIDEMVDG-GIVLETEPTSITGRVSMRGADV--DAPLAEQTISQAFAMAREHLARSLLN 178          
BLAST of Gcaud7628.t1 vs. uniprot
Match: A0A388MBV6_CHABU (Coatomer subunit zeta n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MBV6_CHABU)

HSP 1 Score: 116 bits (291), Expect = 1.390e-29
Identity = 71/182 (39.01%), Postives = 114/182 (62.64%), Query Frame = 0
Query:    7 VEQPLVKAVIIINHEGKRICSRF-CDRVHWDDQESQRDFEMSLLKKIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQSLDETLNITMREQVYEE-AVLENLETVLLVVDELVDQEGVIMESEPTELAARVGQQGGSFISQVPLGEQTLGQALQTARDQITRSIL 186
            V  PLVK +++++ EGKR+  ++ CD   W  Q+S+  FE S+  K       +E  ++  F  +++ YK   DLL +V GG  ENELI++ VLQ+  + + + +R  V E+  VLENL+ +LL +DELVD  G+I+E++   +A+RV  +G    + +PL EQT+ QAL TA++ + RS+L
Sbjct:    8 VSAPLVKNILLLDSEGKRVAVKYYCDE--WATQQSKLAFEKSVFTKTHRTNARAEA-EIGMFDGYIIVYKFVSDLLFYVTGGEDENELILSTVLQAFFDAVGLLLRNNVVEKRTVLENLDLILLCLDELVDG-GIILETDANVVASRVAMRGAD--ADLPLSEQTISQALATAKETLARSLL 183          
The following BLAST results are available for this feature:
BLAST of Gcaud7628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3K4_9FLOR5.020e-11391.44Coatomer subunit zeta n=1 Tax=Gracilariopsis chord... [more]
A0A1X6NT45_PORUM1.040e-7365.56Coatomer subunit zeta n=1 Tax=Porphyra umbilicalis... [more]
A0A7S1XCA1_9RHOD7.410e-5153.33Coatomer subunit zeta n=1 Tax=Compsopogon caeruleu... [more]
A0A5J4YNE1_PORPP4.650e-4848.90Coatomer subunit zeta n=1 Tax=Porphyridium purpure... [more]
A0A0U9HJ45_KLENI4.310e-3037.29Coatomer subunit zeta n=1 Tax=Klebsormidium nitens... [more]
A0A507BTL6_9FUNG4.430e-3038.86Coatomer subunit zeta n=1 Tax=Synchytrium microbal... [more]
A0A507DRM2_9FUNG8.840e-3038.29Coatomer subunit zeta n=1 Tax=Synchytrium endobiot... [more]
A0A6P6UIS7_COFAR1.150e-2937.85Coatomer subunit zeta n=2 Tax=Coffea TaxID=13442 R... [more]
A0A0D6QZW3_ARACU1.180e-2937.64Coatomer subunit zeta n=2 Tax=Araucariaceae TaxID=... [more]
A0A388MBV6_CHABU1.390e-2939.01Coatomer subunit zeta n=1 Tax=Chara braunii TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 12..154
e-value: 1.1E-17
score: 64.3
NoneNo IPR availableGENE3D3.30.450.60coord: 7..156
e-value: 1.0E-30
score: 108.6
NoneNo IPR availablePANTHERPTHR11043:SF0COAT PROTEIN (COATOMER) ZETA, ISOFORM Acoord: 10..186
IPR039652Coatomer subunit zetaPANTHERPTHR11043ZETA-COAT PROTEINcoord: 10..186
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 12..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_534_length_22701_cov_4.725210contigNODE_534_length_22701_cov_4.725210:16153..16716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7628.t1Gcaud7628.t1Gracilaria caudata M_176_S67 malemRNANODE_534_length_22701_cov_4.725210 16153..16716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7628.t1 ID=Gcaud7628.t1|Name=Gcaud7628.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=188bp
MQGLSGVEQPLVKAVIIINHEGKRICSRFCDRVHWDDQESQRDFEMSLLK
KIQTMGDLSEGVDVMEFKNFVVAYKQSDDLLMFVVGGALENELIMAEVLQ
SLDETLNITMREQVYEEAVLENLETVLLVVDELVDQEGVIMESEPTELAA
RVGQQGGSFISQVPLGEQTLGQALQTARDQITRSILS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022775AP_mu_sigma_su
IPR039652Coatomer_zeta
IPR011012Longin-like_dom_sf