Gcaud7694.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7694.t1
Unique NameGcaud7694.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length923
Homology
BLAST of Gcaud7694.t1 vs. uniprot
Match: A0A2V3J1N2_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1N2_9FLOR)

HSP 1 Score: 654 bits (1688), Expect = 1.310e-223
Identity = 450/611 (73.65%), Postives = 499/611 (81.67%), Query Frame = 0
Query:  316 MPTALRFDEVDPPETTS-AHPTSSNAKPPLPPSKPSQQRQRPRVTLLQP--STALPERKDDAPVSVLETSAPLDSSPSEQYSSISERGERVAIAFELLGKQTDEYPEVPSEL-GGLSPKEVIIPLIVEAMRQHRSDPKVADRALTILRRLTVSENCRKCIGDNGGIEAVVEIMRAHSLRSGIQIQGCLTLANLAFRNRNNKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNRSDAGEQETSVASGAVEVLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERLRTAGGIEVLVQSLKQNVHSLKLAEVGMSLTRVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNECTAASPEGVCYFLKALCNASFESLASKVYAGRCGAVEATLRIMSDNSYREVNRVVEDACRLLRNLLDGVSQNQRNMLKHRGTVVVLDAARAHGEALAGVAEHSLAIFASMATNRGFASQLLEGAGDIYQLARKLRKAHDGNPRVETQVTSLIRTLENDERAVASAGSTEIRDWRTKSSMERALRPVRSLHRGRHSEDHETRLQRLRSMPLPLVRNRS 922
            +PTALRFD++D P     A P +S+ KPPLPP++      RPR     P  +T  PER++D   S  + S P+D+S SE+Y+SISERGERVA AFE LGKQT EY + PS+L GGLSPKEVIIPLIVEAMRQHRSDPKVADRALTILRRLTVSENCRKCIG+NGGIEAVVEIMR+HSLR+GIQ QGCLTLANLAFRNR NKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX TNRSDAGEQETSVASGAVEVLL+A                            MERLRTAGGIEVLV +L+QNV S KL+EVGMSLTRVV            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     MNECT ASP+GVCYFLKALCNA+F+S+ASK++AGR GA+EATLRIMS+ +Y+EV RVVEDACRLLRNLLDGV QNQRN+LKHRG  VVLD AR HGEALAGVAEHS+AIF SMA NRGFASQ+ EG+GDI QLAR+LRKAH+GNPRVETQV +LIR LE+DER+VAS GS+++RDW  KSS+ERALRPVRSLHRGR  ++ E RLQRLRSMPLPL RNRS
Sbjct:    3 VPTALRFDDIDSPSAIPPAPPNTSHGKPPLPPAR---NIHRPRTRASPPLRTTQSPERQEDV-ASSRDASPPIDTSLSEEYASISERGERVAAAFERLGKQTYEYQDSPSDLAGGLSPKEVIIPLIVEAMRQHRSDPKVADRALTILRRLTVSENCRKCIGENGGIEAVVEIMRSHSLRAGIQTQGCLTLANLAFRNRTNKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNRSDAGEQETSVASGAVEVLLTALERYICSETVQSNALIALTNIASRSPYGMERLRTAGGIEVLVSTLQQNVRSEKLSEVGMSLTRVVVEDDRNKELFGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVNIMNECTTASPDGVCYFLKALCNATFDSMASKIFAGRSGAIEATLRIMSEEAYKEVGRVVEDACRLLRNLLDGVVQNQRNLLKHRGIAVVLDVARVHGEALAGVAEHSVAIFVSMAANRGFASQVQEGSGDINQLARRLRKAHEGNPRVETQVNTLIRALEHDERSVASLGSSDLRDWSNKSSLERALRPVRSLHRGRSGDEQEKRLQRLRSMPLPLGRNRS 609          
BLAST of Gcaud7694.t1 vs. uniprot
Match: R7QFR9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFR9_CHOCR)

HSP 1 Score: 306 bits (785), Expect = 3.350e-89
Identity = 234/549 (42.62%), Postives = 306/549 (55.74%), Query Frame = 0
Query:  385 LDSSPSEQYSSISERGERVAIAFELLGKQ------TDEYPEVPSELGGLSPKEVIIPLIVEAMRQHRSDPKVADRALTILRRLTVSENCRKCIGDNGGIEAVVEIMRAHSLRSGIQIQGCLTLANLAFRNRNNKEAVMKCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNRSDAGEQETSVASGAVEVLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERLRTAGGIEVLVQSLKQNVHSLKLAEVGMSLTRVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNECTAASPEGVCYFLKALCNASFESLASKVYAGRCGAVEATLRIMSDNSYREVNRVVEDACRLLRNLLDGVSQNQRNMLKHRGTVVVLDAARAHGEALAGVAEHSLAIFASMATNRGFASQLLEGAGDIYQLARKLRKAHDGNPRVETQVTSLIRTLEN--DERAVASAGSTEIRD-----WR---TKSSMERALRPVRSLHRGRHSEDHE-TRLQRLRSMPLP 916
            LDSSP E Y S ++R ER+A A E + K       + E    PS+    SPK  +IPLIV+A+ QH  DPKVAD+ LT LRRLTV   CR+ IG+ GG+EA+VE+MRAHSLR  IQ Q CL LANLA++   NK A M   XXXXXXXXXXXXXXXXXXXXXXXXXXXXFTN +  GEQ+ SV +GAVEVL++A                            MERLR+AGG++ ++ S+  N+ S +L+E+ +S  +V+                                                                 M +  ++  E     LKAL N++++SLA+K  AGR GAVEA L ++S ++++    VVEDACR+LRNL DGV  N R +++  G V VL+AAR HG + AGVAEH +AIF +++ N+  A QL EG  D   +AR+L+ AH GN RV  QV  L+  LE   D+    S  S E R+     WR   T+ S E +LR  +SL +    E  + TRLQRLRS+PLP
Sbjct:   88 LDSSPLEHYESKTQRSERIATALERIAKNAAFFGLSAEENACPSDT---SPKTAVIPLIVDAITQHVRDPKVADQGLTTLRRLTVDPVCRRTIGECGGVEAIVEVMRAHSLRVRIQTQACLALANLAYKCPENKRAFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNGAIEGEQDASVTAGAVEVLVTALEQYPKSNVVQQQCMIALTNIAAASPLGMERLRSAGGVQAVIASMHNNIRSSQLSEIALSCAKVLVEEESNQKIFGHDGGIEAITMVLDEHRGHTAIAVRGCAAFRQLAFQRENRDLLGRCGSIRAIITAMMDTASSKAETAAVLLKALSNSTYDSLANKTLAGRLGAVEAALHLISPDTFQSNTGVVEDACRVLRNLADGVQLNHRLLIEKGGVVAVLEAAREHGTSSAGVAEHCVAIFVNLSANQSLAEQLKEGGKDFAAMARELQLAHPGNDRVYKQVADLLSILEPKVDDGEPVSTESVEWRESKSCTWRETATQISFEESLRSSKSLRKTFSKEGEQLTRLQRLRSLPLP 633          
The following BLAST results are available for this feature:
BLAST of Gcaud7694.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1N2_9FLOR1.310e-22373.65Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
R7QFR9_CHOCR3.350e-8942.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 552..595
e-value: 1.3
score: 18.1
coord: 683..726
e-value: 120.0
score: 4.8
coord: 728..772
e-value: 16.0
score: 11.7
coord: 464..506
e-value: 7.8
score: 14.1
coord: 508..550
e-value: 190.0
score: 3.3
coord: 640..682
e-value: 23.0
score: 10.4
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 475..520
score: 9.6424
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 625..872
e-value: 3.2E-18
score: 67.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 429..624
e-value: 2.4E-29
score: 104.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 891..909
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 891..922
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 431..598
coord: 607..684
coord: 693..859
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 578..860
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 433..618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_528_length_22897_cov_4.686837contigNODE_528_length_22897_cov_4.686837:402..3170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7694.t1Gcaud7694.t1Gracilaria caudata M_176_S67 malemRNANODE_528_length_22897_cov_4.686837 402..3170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7694.t1 ID=Gcaud7694.t1|Name=Gcaud7694.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=923bp
MQRAVPAPTQSSPLPMDQQPAPSARVRRRLRFGSLLSRRFSHLFAGRKDS
ATDPSASRRVPASAVPSAYGEPSAPTLPRVPHSPPASPPDVRSEPSHKLR
SLFAAARSAAENDDDSARSGDPSLTASSRRSIPLSPVTGTSPSDSTVGSA
TPWDRKDDQTPSPVSSPPSALTVHFEADRIKPSDHLLSHTQLTEGPSSQS
PDRGPNITPPVTFSPEDLHIQSPTLTPQSPELQDPAARNVPEPEALNAEN
RLSLVSSDSDSDQSFPSAQNEISSPNVKDPTPTNISQPHSYNQRPVHRQS
PVRPSHQSRAPKSIGMPTALRFDEVDPPETTSAHPTSSNAKPPLPPSKPS
QQRQRPRVTLLQPSTALPERKDDAPVSVLETSAPLDSSPSEQYSSISERG
ERVAIAFELLGKQTDEYPEVPSELGGLSPKEVIIPLIVEAMRQHRSDPKV
ADRALTILRRLTVSENCRKCIGDNGGIEAVVEIMRAHSLRSGIQIQGCLT
LANLAFRNRNNKEAVMKCSGLKVVVGALSVHRNVEQIQAWGCLAIRNFTN
RSDAGEQETSVASGAVEVLLSALERYAGSETVQNNALIALTNIASRSPYG
MERLRTAGGIEVLVQSLKQNVHSLKLAEVGMSLTRVVAEDDRNKELFGQA
GGIQAMTAVMDTHRGHLAISVKGCAAVRHLAFRRKNREIMGSCGIIRTIV
CVMNECTAASPEGVCYFLKALCNASFESLASKVYAGRCGAVEATLRIMSD
NSYREVNRVVEDACRLLRNLLDGVSQNQRNMLKHRGTVVVLDAARAHGEA
LAGVAEHSLAIFASMATNRGFASQLLEGAGDIYQLARKLRKAHDGNPRVE
TQVTSLIRTLENDERAVASAGSTEIRDWRTKSSMERALRPVRSLHRGRHS
EDHETRLQRLRSMPLPLVRNRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold