Gcaud7449.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7449.t1
Unique NameGcaud7449.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length310
Homology
BLAST of Gcaud7449.t1 vs. uniprot
Match: A0A2V3J2R7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2R7_9FLOR)

HSP 1 Score: 218 bits (554), Expect = 3.120e-65
Identity = 143/303 (47.19%), Postives = 181/303 (59.74%), Query Frame = 0
Query:   12 PLSPRRA-SDRLAKSRATGQSHRDSEREHIIYLLTAIENGRLENALLFVMFTQAYKRDRMLRFGANHSIAASNAHTNAHQWHVGMDFTEDKVPHLRQLMYPVSQPCQVMLGQRMLSGATASALLELLMHRRNMWGTTHAVRPNAADAEGHRRR---PPYRAATPLHDAEAIVHFASRLYCREIAANYADKQVIRDHVQQRLGNLAMVAYNVDHIEATVNPV----HCLSHYVYEDDYDVLPRSPTTPDTAEFGSPLKIRRVDGAKRCTRCGMLKIAGSGHGRSKCADGLSISSHVPYPAFAAL 306
            P S  RA SDRLAKSRATGQS+RD+EREHI  L+TAIE+GRLEN LLFV++             A  S A   +  +A QWHV  D  ED        ++ +S   Q MLGQ  +SGA A+ LLEL++HRRNM G    V+  AA A+  RR    PPYR AT    A +IV  A R +CRE +   A    + DHVQ RLG++A+ AY++D+IEA +NP      C  H     + +    +    ++  F +    RR DGAKRC+RCG+LKI GSGHGRSKCADGL I S VP+PA  A+
Sbjct:   48 PASSLRAQSDRLAKSRATGQSYRDNEREHIFRLITAIEHGRLENNLLFVLYANP---------SAPLSCATCISSRHAAQWHVPWDVAEDGCEIKDVRLHALSARTQAMLGQGFISGALATVLLELMLHRRNMLGEPCPVQLGAAVADADRRXXXXPPYRTATTQEGAASIVQLAVRQFCRESSRPRA----MWDHVQWRLGHVAVAAYHMDNIEAMLNPQVRLSDCARHSRRGAELECSDAARGV-ESELFDALGMGRRGDGAKRCSRCGVLKITGSGHGRSKCADGLGICSAVPFPASPAM 336          
BLAST of Gcaud7449.t1 vs. uniprot
Match: A0A2V3J040_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J040_9FLOR)

HSP 1 Score: 155 bits (392), Expect = 1.340e-40
Identity = 115/333 (34.53%), Postives = 171/333 (51.35%), Query Frame = 0
Query:   21 RLAKSRATGQSHRDSEREHIIYLLTAIENGRLENALLFVMFTQAYKRDRMLRFGANHSIAAS-----------------------NAHTNAHQ--------------WHVGMDFTEDKVPHLRQLMYPVSQPCQVMLGQRMLSGATASALLELLMHRRNMWGTTHAVRPNAADA-------------EGHRR-RPPYRAATPLHDAEAIVHFASRLYCREIAANYADKQVIRDHVQQRLGNLAMVAYNVDHIEATVNPVHCL--SHYVYEDDYDVLPRSPTTPDTAEFGSPLKIRRVDGAKRCTRCGMLKIAGSGHGRSKCADGLSISSHVPY 300
            RLAKSRATGQ +RD+E+  +  L+ AI+NGR+EN LLF +++ A+KR R          AAS                         H   +Q              W  G + TED    +  L++P+S  CQ +L QR +SGA A+ LLE+++HRRN+      VR  A D+             +G RR R P+R A      ++++  A R + RE A ++ D   + D+VQ+R+GNL+++ ++ D  EA  N    L       ED+   +     + +   FGS   +   +G +RCTRCG+LK++GSGHGRSKC DGL ++S VP+
Sbjct:   77 RLAKSRATGQKYRDNEQHRVFRLIIAIQNGRMENCLLFTVYS-AHKRRRSSATPCVEGCAASYCSPSCAMGAASCTFWNKAAGRVEQHRFLYQRRYQCARTKQLGPLWFRGDEITEDCESGVHVLLHPLSNRCQRVLRQRFISGALATTLLEIILHRRNI------VRTQADDSWDEDGDGFSSVETDGRRRKRSPFRKAVAESTMQSLMQLAIREFSRE-AGSHPD---LADYVQRRMGNLSILMFHYDDAEAWCNAETDLVGDDGPLEDEMPDVEGWSCSGEVNGFGS-WDVTLREGPRRCTRCGVLKVSGSGHGRSKCMDGLGVASTVPF 397          
BLAST of Gcaud7449.t1 vs. uniprot
Match: A0A1X6NTU9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTU9_PORUM)

HSP 1 Score: 59.3 bits (142), Expect = 6.340e-7
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
Query:  262 RRVDGAKRCTRCGMLKIAGSGHGRSKCADGLSISSHVPY 300
            RR +G KRC+RC  LK+AGSGHGRSKC DG SI+S  PY
Sbjct:   81 RRGEGPKRCSRCRKLKVAGSGHGRSKCDDGHSIASMTPY 119          
The following BLAST results are available for this feature:
BLAST of Gcaud7449.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J2R7_9FLOR3.120e-6547.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J040_9FLOR1.340e-4034.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NTU9_PORUM6.340e-769.23Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 303..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_523_length_23072_cov_4.281145contigNODE_523_length_23072_cov_4.281145:8415..9344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7449.t1Gcaud7449.t1Gracilaria caudata M_176_S67 malemRNANODE_523_length_23072_cov_4.281145 8415..9344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7449.t1 ID=Gcaud7449.t1|Name=Gcaud7449.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=310bp
MDSASGSEHEGPLSPRRASDRLAKSRATGQSHRDSEREHIIYLLTAIENG
RLENALLFVMFTQAYKRDRMLRFGANHSIAASNAHTNAHQWHVGMDFTED
KVPHLRQLMYPVSQPCQVMLGQRMLSGATASALLELLMHRRNMWGTTHAV
RPNAADAEGHRRRPPYRAATPLHDAEAIVHFASRLYCREIAANYADKQVI
RDHVQQRLGNLAMVAYNVDHIEATVNPVHCLSHYVYEDDYDVLPRSPTTP
DTAEFGSPLKIRRVDGAKRCTRCGMLKIAGSGHGRSKCADGLSISSHVPY
PAFAALAQK*
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