Gcaud7447.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7447.t1
Unique NameGcaud7447.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length263
Homology
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A2V3J5N9_9FLOR (Translation machinery-associated protein 22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N9_9FLOR)

HSP 1 Score: 341 bits (874), Expect = 3.820e-116
Identity = 172/219 (78.54%), Postives = 188/219 (85.84%), Query Frame = 0
Query:   44 TATEAGPSQPPPVKDDATAAPVRDERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPDECAARLEALKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWGVPKDAIFIVNAQKKKVKAFP 262
            TATE  P +  P K      P RD RYPL+VLYC VC  PPELHE+HSR+ FEKC EWLR NAPQ+FP+LFPDECAARLEAL+LAE+ GVS P    +Q +++ PKVAVPIEQKTSGGKKKKTPAHI+LALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSIT+SPDNR+VIEIQGSRQQDFAQL H +WGVPKD IFIVNAQKKKVKAFP
Sbjct:   16 TATELSPQEELPQK------PERDPRYPLSVLYCPVCTFPPELHEYHSRTHFEKCKEWLRKNAPQHFPDLFPDECAARLEALRLAEEQGVSLPPTTSDQQDNNQPKVAVPIEQKTSGGKKKKTPAHIVLALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITISPDNRDVIEIQGSRQQDFAQLAHSEWGVPKDVIFIVNAQKKKVKAFP 228          
BLAST of Gcaud7447.t1 vs. uniprot
Match: R7QTM7_CHOCR (SUI1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTM7_CHOCR)

HSP 1 Score: 280 bits (716), Expect = 4.010e-92
Identity = 147/223 (65.92%), Postives = 174/223 (78.03%), Query Frame = 0
Query:   54 PPVKDDATAA-------------PVRDERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPDECAARLEALKLAEQAGVSPPLLPCEQPES-DAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWGVPKDAIFIVNAQKKKVKAFP 262
            PPV D + AA             P  D RYPL V YCSVC LP E+HE+HSR+QF+KC EWLR +AP++F     DE AARLEA+++AE++G +  +   ++ E  DA KVAVPIEQKTSGGK     A I+L LGQRKGKKQVTIVYGLDLFGIKLK+AAKAAKRKFATGSSIT+S DNR+VIEIQGSRQ+DFA+LVHK+WGVPK+A++IVNAQKKKVKAFP
Sbjct:    6 PPVDDTSNAASASDQVAAEEPQGPQADPRYPLKVQYCSVCTLPAEVHEYHSRNQFQKCKEWLRKHAPEHFXXXXXDEIAARLEAVRIAEESGNAVVMPGADEDEDEDAIKVAVPIEQKTSGGKXXXXXAEIVLMLGQRKGKKQVTIVYGLDLFGIKLKEAAKAAKRKFATGSSITVSADNRDVIEIQGSRQEDFAELVHKEWGVPKEAVYIVNAQKKKVKAFP 228          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A1X6PK60_PORUM (SUI1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PK60_PORUM)

HSP 1 Score: 162 bits (410), Expect = 1.470e-45
Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 0
Query:   62 AAPVRDERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPD-ECAARLEALKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWGVPKDAIFIVNAQKKKVKAFP 262
            AAPV    YPL V YC +CGLPPE   F+S+S F KC  WL+   PQ  PE+F + E  A+L A+  A   G +          + A  ++ P   K +GG+ K+    I++   QRKG+KQVTIV GLDLF IKL DAAKA K+ FA+G+++  S DNR+ +EIQG+R  +FA+LV  ++ VP + IF+V ++ KK +AFP
Sbjct:   57 AAPVT---YPLVVEYCPMCGLPPEYCRFNSKSVFAKCKPWLKEAHPQLVPEMFGEGELEAKLAAM--AVDGGAATASANAAADAAVASSLSGPKLVKRAGGRSKRVDPEIVIHTDQRKGRKQVTIVVGLDLFDIKLSDAAKACKKAFASGATVAKSADNRDTVEIQGTRAHEFAELVRDKYKVPSELIFVVESKSKK-RAFP 252          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A7S3A8E3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8E3_9RHOD)

HSP 1 Score: 143 bits (361), Expect = 7.010e-39
Identity = 81/199 (40.70%), Postives = 111/199 (55.78%), Query Frame = 0
Query:   66 RDERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPDECAARLEALKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGKKKKTPA---HIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWGVPKDAIFIVNAQKKKVKAF 261
            +D RYPL VLYC VCG+PPEL E+++   F++C  WL  N P+ +P+L  +E    L A  LA                    K++    +     KKKK  A    I++    RKG+KQVTIVYGLDLFG+K+ + AK  K+KF+ G+S   +PD RE +EIQG R    A  +   + VP+  IF+V+  K KV AF
Sbjct:   12 KDPRYPLEVLYCGVCGIPPELCEYNTPEDFDRCKPWLAANVPEMYPDLKLEEVDGSL-AENLANA------------------KISKSSAKDGKESKKKKRVAIEPEIVIQKSARKGRKQVTIVYGLDLFGMKIPEVAKVCKKKFSCGASAVKAPDQRETLEIQGDRMTTMAAFLRDDFKVPEGRIFVVDEDKAKVPAF 191          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A5J4Z684_PORPP (Translation machinery-associated protein 22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z684_PORPP)

HSP 1 Score: 140 bits (354), Expect = 1.070e-37
Identity = 78/209 (37.32%), Postives = 115/209 (55.02%), Query Frame = 0
Query:   58 DDATAAPVRDERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPDECAARLEA----LKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWGVPKDAIFIVNAQKKKVKAFP 262
            DD TAA      YPL V+YC  CGLPPE  EF ++    +C  W+ +N P  +P+LFP      +E     L + +  G  P                     K   GKKKK    ++LAL  +KG+K  T++ G DLFGIKL +AAK  K++FA G ++T +   ++ IE+QG ++++ A+L+  Q+ VP+  IFI+  +K KV+AFP
Sbjct:   27 DDGTAA----VSYPLHVVYCGNCGLPPEYCEFDAKEFEARCKPWIASNCPWVYPDLFPKGSGGAVEENMKQLDIQDADGEEP---------------------KEKPGKKKKGDPEVLLALSTKKGRKSATVITGADLFGIKLDEAAKMFKKRFACGCAVTKNAQQQDTIEVQGDQRREAAELLRDQYNVPEYVIFIMEDKKSKVRAFP 210          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A1Y1HW12_KLENI (Translation machinery-associated protein 22 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HW12_KLENI)

HSP 1 Score: 126 bits (316), Expect = 3.250e-32
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 0
Query:   67 DERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFP---DECAARLEALKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWG-VPKDAIFIVNAQKKKV 258
            D+  P TVLYC VCGLPPE  EF     FEKC  WL  NAP  +PEL     DE  A+L  L+L  + G           E+   K    I +K  GGK K+K    I++    R  +K +T V G++LFG+KL DA+K   +KFA+GSS+   P  +E I++QG    D  + + + W  +P+ AI+++   K+KV
Sbjct:    4 DKLQPQTVLYCGVCGLPPEFCEFGP--DFEKCKPWLIKNAPGAYPELTKKAADEAEAKLGDLRLGGEDGADG--------EASTSKPEDEIVKKLPGGKVKRKEKQEILVEKATRNKRKAITTVKGMELFGVKLGDASKKFGKKFASGSSVVKGPTEKEQIDVQGDFLYDICEFITETWKEIPESAIYVMEDGKRKV 190          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A833QI23_9POAL (Translation machinery-associated protein 22 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QI23_9POAL)

HSP 1 Score: 117 bits (294), Expect = 5.850e-29
Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 0
Query:   67 DERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFP-------DECAARLEALKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQW-GVPKDAIFIVNAQKK 256
            D+  P+ VLYC VCGLP E  EF     FEKC  WLR++AP  +P+LF        ++ A +L+ + ++ +          +Q E           ++  GGK KKK    +++    R  +K VT+V GL+LFG+KL DA+K   +KFATG+S+   P ++E I++QG    D  + +   W  VP+ AIF +   KK
Sbjct:    4 DKPEPVKVLYCGVCGLPAEYCEFGP--DFEKCKPWLRDHAPDLYPDLFAGGEGKEVEKTAEKLQGVGISSKGNTGGEASASKQEEV----------KRLPGGKIKKKERPEVVIEKIVRNKRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDVVEFITDTWPDVPESAIFFIEDGKK 190          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A5B7BSY1_DAVIN (Translation machinery-associated protein 22 n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BSY1_DAVIN)

HSP 1 Score: 117 bits (292), Expect = 1.160e-28
Identity = 72/195 (36.92%), Postives = 110/195 (56.41%), Query Frame = 0
Query:   71 PLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPD-------ECAARLEALKLAEQAGVSPPLLPCEQPESDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQW-GVPKDAIFIVNAQKK 256
            P+ VLYCSVC LP E  EF     FEKC  WL NNAP+ +P+L  +       + + +L++++++   G +P        ES + K  V   ++  GGK KKK    +++    R  +K +T+V GL+LFGIKL DA+K   +KFATG+S+   P ++E I++QG    D    + + W  VP+ AI+ +   KK
Sbjct:    7 PVRVLYCSVCTLPAEYCEFGP--DFEKCKPWLINNAPELYPDLLKEANEKETGKVSEQLQSVRISGGDGAAP------SGESSSSKQEV---KRLPGGKIKKKEKQEVVIEKVVRNKRKCITMVKGLELFGIKLSDASKKLGKKFATGASVVKGPTDKEQIDVQGDIAYDIVDFITETWPDVPETAIYFIEDGKK 190          
BLAST of Gcaud7447.t1 vs. uniprot
Match: A0A061GK41_THECC (Translation machinery-associated protein 22 n=8 Tax=Malvaceae TaxID=3629 RepID=A0A061GK41_THECC)

HSP 1 Score: 117 bits (292), Expect = 1.290e-28
Identity = 72/192 (37.50%), Postives = 104/192 (54.17%), Query Frame = 0
Query:   71 PLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPDECAARLEALKLAEQ---AGVSPP--LLPCEQPESDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQW-GVPKDAIFIVNAQKK 256
            P+ VLYC +C LP E  EF     FEKC  WL  NAP+ +P+L  +  A   EA K++EQ    G+S         QP   +      +++   G  KKK    +++    R  +K +TIV GLDLFG+KL DA+K   +KFATG+S+   P ++E I++QG    D  + + + W  VP+ AIF +   KK
Sbjct:    7 PVRVLYCPICSLPAEYCEFGP--DFEKCKPWLIKNAPELYPDLCKE--ANEKEAEKVSEQLQSVGISSADGAASSAQPGDTSSSKQEEVKRLPGGKIKKKEKQEVVIEKVVRNRRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTDKEQIDVQGDIAYDIVEFITETWPAVPETAIFFIEDGKK 194          
BLAST of Gcaud7447.t1 vs. uniprot
Match: D7STQ8_VITVI (Translation machinery-associated protein 22 n=1 Tax=Vitis vinifera TaxID=29760 RepID=D7STQ8_VITVI)

HSP 1 Score: 116 bits (291), Expect = 1.760e-28
Identity = 75/191 (39.27%), Postives = 104/191 (54.45%), Query Frame = 0
Query:   71 PLTVLYCSVCGLPPELHEFHSRSQFEKCTEWLRNNAPQYFPELFPDECAARLEALKLAEQ---AGVSPPLLPCEQPESDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQW-GVPKDAIFIVNAQKK 256
            P+ VLYCSVC LP E  EF     FEKC  WL  NAP+ +P+L  +  A+  EA K++EQ    G+S        P            ++  GGK KKK    +I+    R  +K +TIV GLDLFG+KL DA+K   +KFATG+S+   P ++E I++QG    D  + V   W  VP+ AI+ +   +K
Sbjct:    7 PVRVLYCSVCSLPAEYCEFGP--DFEKCKPWLIKNAPELYPDLLKE--ASEKEADKVSEQLQSVGISSGAGNETAPSGKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCITIVKGLDLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWPDVPETAIYFIEDGRK 193          
The following BLAST results are available for this feature:
BLAST of Gcaud7447.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5N9_9FLOR3.820e-11678.54Translation machinery-associated protein 22 n=1 Ta... [more]
R7QTM7_CHOCR4.010e-9265.92SUI1 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6PK60_PORUM1.470e-4545.54SUI1 domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S3A8E3_9RHOD7.010e-3940.70Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z684_PORPP1.070e-3737.32Translation machinery-associated protein 22 n=1 Ta... [more]
A0A1Y1HW12_KLENI3.250e-3239.09Translation machinery-associated protein 22 n=1 Ta... [more]
A0A833QI23_9POAL5.850e-2935.68Translation machinery-associated protein 22 n=1 Ta... [more]
A0A5B7BSY1_DAVIN1.160e-2836.92Translation machinery-associated protein 22 n=2 Ta... [more]
A0A061GK41_THECC1.290e-2837.50Translation machinery-associated protein 22 n=8 Ta... [more]
D7STQ8_VITVI1.760e-2839.27Translation machinery-associated protein 22 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.780.10coord: 145..252
e-value: 5.9E-17
score: 64.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..64
NoneNo IPR availablePANTHERPTHR12789DENSITY-REGULATED PROTEIN HOMOLOGcoord: 61..256
IPR001950SUI1 domainPFAMPF01253SUI1coord: 169..244
e-value: 5.7E-17
score: 61.9
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 170..241
score: 17.755024
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 90..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_523_length_23072_cov_4.281145contigNODE_523_length_23072_cov_4.281145:5456..6497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7447.t1Gcaud7447.t1Gracilaria caudata M_176_S67 malemRNANODE_523_length_23072_cov_4.281145 5456..6497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7447.t1 ID=Gcaud7447.t1|Name=Gcaud7447.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=263bp
MPQQIQAGVTPVLLKNELKAFVVLEASVTMDGASLPEQSAAAATATEAGP
SQPPPVKDDATAAPVRDERYPLTVLYCSVCGLPPELHEFHSRSQFEKCTE
WLRNNAPQYFPELFPDECAARLEALKLAEQAGVSPPLLPCEQPESDAPKV
AVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAA
KAAKRKFATGSSITMSPDNREVIEIQGSRQQDFAQLVHKQWGVPKDAIFI
VNAQKKKVKAFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001950SUI1
IPR036877SUI1_dom_sf