Gcaud7451.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7451.t1
Unique NameGcaud7451.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length813
Homology
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A2V3J5S8_9FLOR (Chromatin assembly factor 1 subunit FSM n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5S8_9FLOR)

HSP 1 Score: 854 bits (2207), Expect = 3.250e-293
Identity = 470/699 (67.24%), Postives = 571/699 (81.69%), Query Frame = 0
Query:  115 EQQNKQFSRSRLTPHPKEPTLMHYYERLDKTVQQAIEFSRKLRYPTECAPPDCSQIARVVAHDLQGVLGSGVDSLLAKQASNKQYLEAFTSKVAGDFVEYGVSGTHLLFMADALIATADSPVNTMQPPISPRQTHSHPIVERARVRVFEAEITHLPLAFVEQLVKTRRSMRRFKSRIELHVRIILALEGKGRRVSDAQLDRLKLQLEKADQQAENERKRRMAAEAAKLEKERRAKDAAKQSEKNGLREKQLKKRRRQEHAQASFMKRFVKPKTEDRQREDAQEVHYVPRNRSGHYAQEVAEDPDVMSVHWWLRSEIQFVSLPILEEMFKEGANDLKSHLKDCAARREAAEKAVNSVLHDYRSQRRVPCDDRYPRFARKRADVRGRRKLGPIKLLQFDENYRPGYYGTFRKSAVVSGRRPFKKDSDLNYEHDSEAEWEEEE-GEDIQDVEDDKELANEEAELRKLYGSDXXXXXXXXXXXXXXXXXXXXXXGDESGVQNGEGEKKEKEGEVIDLTKNTLKDVQKSRDIVRLKRRKLSVGSVVIEGVSFTGASKLDAYPVSTFTDSKPIQMFNPFVFAASDIVSEHLKAKVPSTRPARPSNIDEKAKLDLAVALVNDGSNRDRIVFQFCESRRTRGLNVPAKSEVIRAISEMATREKRDGDTRAVWHLNDAKLEKMVQQMGNVRETVVVARPITTPLSAMK 812
            +Q  KQFSRSR+ P PKEPTLMHYY RLDK +Q+A EFSR LR P + A PD  Q+ RVVA++ QGVLGS +D LL K+AS+  ++  FTSKVAGDFVEYGVSG++L  +ADAL+A   +    ++P +SP+Q+H+HPIVERARVRVFEAEITHLPL+FVE LVK RR+MRRFKSRI+LHVRIILALEGKGR+VSDAQLDRLKLQLEKADQQAE ERKRRMAAEAA+LEKERR K+AAKQSE++G+++K+LKKRRRQE+AQASFMKRFV+PKT++R  E+ QEV Y PR R+GHYA +VA DP+VM V WWLRSE++FV +  L+E+FKE  + L+ HL  CA RR+ AE+ +N+VL DYRSQRR+  DDRYP+F R+RA+VRGRR+ GPIKLLQFDEN+RP Y+G+FRKS  VSGRRPFKKD+ +NY+HDSE        GEDI DVE +KELA+EEAEL+KLYGSD    XX  XXXXXXXXXXX   G+ +  Q  +GEKK      +DLT+    +V+K RD +++KR+K +  +VVIEG+S +G SKLDAYPV+ F +SKPI MFNPFVF+ASDI +EHLK+KVP TR  + SNIDEKAKLDLAVALVNDGSNRDRIV+QFCESRRTRGL VPAKSEV+RAIS+MATREKRDGD+RAVW+LNDA LE+MVQQMG++ +    +RPI   LS+ K
Sbjct:  640 QQPVKQFSRSRVAPRPKEPTLMHYYNRLDKIIQEATEFSRTLRVPADFAHPDKGQMPRVVAYEFQGVLGSEIDGLLKKRASDSAFVTTFTSKVAGDFVEYGVSGSNLAHIADALLAKPAASSYVLEPAVSPQQSHTHPIVERARVRVFEAEITHLPLSFVETLVKIRRTMRRFKSRIDLHVRIILALEGKGRKVSDAQLDRLKLQLEKADQQAETERKRRMAAEAARLEKERRVKEAAKQSERSGVKDKELKKRRRQENAQASFMKRFVRPKTDERPAEELQEVQYTPRERTGHYALDVATDPNVMGVEWWLRSELRFVPVSKLDELFKEMPDGLRDHLMMCAERRKGAERNLNTVLQDYRSQRRMLADDRYPQFVRRRAEVRGRRQQGPIKLLQFDENHRPAYFGSFRKSTHVSGRRPFKKDNSINYDHDSEXXXXXXXXGEDILDVEAEKELASEEAELKKLYGSDDEDDXXFLXXXXXXXXXXXGEDGEGNQSQGTDGEKKA--AIEMDLTQGQQNEVKKPRDGMKVKRKKSAFCTVVIEGISLSGPSKLDAYPVTAFANSKPIPMFNPFVFSASDIAAEHLKSKVPPTRAVKLSNIDEKAKLDLAVALVNDGSNRDRIVYQFCESRRTRGLIVPAKSEVVRAISQMATREKRDGDSRAVWYLNDAHLERMVQQMGHIGQATDSSRPIAATLSSGK 1336          
BLAST of Gcaud7451.t1 vs. uniprot
Match: R7Q4K3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4K3_CHOCR)

HSP 1 Score: 298 bits (762), Expect = 9.610e-86
Identity = 258/678 (38.05%), Postives = 349/678 (51.47%), Query Frame = 0
Query:  209 GDFVEYGVSGTHLLFMADAL--IATAD---SPVNTMQPPISPRQTHSHPIVERARVRVFEAEITHLPLAFVEQLVKTRRSMRRFKSRIELHVRIILALEGKGRRVSDAQLDRLKLQLEKADQQAENERKRRMAAEAAKLEKERRAKDAAKQSEKNGLR--EKQLKKRRRQE----------------HAQASFMKRFVKPKTEDRQREDAQ-------------EVHYVPRNRSGHYAQEVAE-----DPDVMSVHWWLRSEIQFVSLPILEEMFKEGANDLKS-----------HLKDCAARREAAEKAVNSVLHDYRSQRRVPCDDRYPRFARKRADVRGRRKLGPIKLLQFDENYRPGYYGTF-RKSAVVSGRRPFKKDSDLNYEHDSEAEWEEEEG-EDIQDVEDDKELANEEAELRKLYGSDXXXXXXXXXXXXXXXXXXXXXXGDESGVQNGEGEKKEKEG-----------------------EVIDLTKNTL----KDVQKSRDI----VRLKRRKLSV--GSVVIEGVSFTGA---SKLDAYPVSTFTDSKPIQMFNPFVFAASDIVSEHLKAKVPSTRPARPSNIDEKAKLDLAVALVNDGS--NRDRIVFQFCESRRTRGLNVPAKSEVIRAISEMATREKRDGDTRAVWHLNDAKLEKMVQQMGNV 794
            G FV YGV  +  L++A  L    +AD   +P    Q  +S         V   RVRV+++E   LP+   E+L   RR + R+++R+E  V+I+  LEG+GR+ + + L++ KL LEKAD           AA A + +K +  +D   +S  N     EK+L+K ++Q                  A+A FMKRFVK K  DR   D++              VH  P        + +       D D M++ WWL+SE++      ++E F   +N  K            H+  CA RR+ AE  ++ VL +YR+ R    DDR PRF R+RADVRGR K G IKLLQF  N+RP ++G   RK+  V  RRP  K+ DL+Y +DS  EWEEEE  ED+ D+E DKE A+E+AELRKLYGSD           XXXXXXXXXXX    G   GEG   +K G                       E++ LT  T     K V  S+D     +R KRR+      S+VI+GVS   A   S LD Y VS+   +  I+MFNP++   +D + E    K    R  R S +DE AK DLAV LV   S  +RD +VF+FCE RR++GL VP K EV+RAI  +AT EKR GD+RA WHLND  L   +++   V
Sbjct:    2 GTFVSYGVPDSSALWVAFRLSQACSADGWKTPSLAAQLELSDSAFLHDSAVNSVRVRVWDSEPAFLPVELSERLFIVRRRLHRYRNRVERCVKILSGLEGRGRKPTASSLEKAKLALEKAD-----------AAHAREEQKIKEKEDXXXRSAANARAKLEKKLEKVQKQRVXXXXXXXXXXXXKEASAEAMFMKRFVKQKAIDRVISDSKVSSAAAAVVPSVCNVHVFPDGTGSTSTEHLGAVPANGDKDAMTLSWWLQSEMEAPDRSRMDERFTATSNSEKELVASSDGAFRQHMHLCAQRRKMAEGRIHKVLREYRAHRTTHLDDRMPRFTRRRADVRGRGKKGTIKLLQFHGNHRPAFFGVDPRKATKVGPRRPILKEPDLDYAYDSGEEWEEEEDVEDLLDIEVDKERADEDAELRKLYGSDEEEDDDFLDDGXXXXXXXXXXXSSCDGEAAGEGHDGKKPGHEVSLPSSLVTQTGPITDGDAPTEMVGLTITTSGTGNKRVNASKDASNENLRKKRRRHRKFKSSIVIQGVSLPKAGEQSPLDCYAVSSIEGAPRIRMFNPYITHVTDFLHETSMPKPAPIRIPRTS-LDEGAKHDLAVVLVTGTSKTSRDNLVFEFCERRRSQGLPVPPKIEVVRAIRVLATNEKRSGDSRAAWHLNDQLLAARIRETHGV 667          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A8D3B8F5_SCOMX (Chromatin assembly factor 1, subunit A (p150) n=2 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3B8F5_SCOMX)

HSP 1 Score: 79.3 bits (194), Expect = 1.470e-11
Identity = 95/305 (31.15%), Postives = 139/305 (45.57%), Query Frame = 0
Query:  492 KRADVRGRRKLGPIKLLQFDENYRPGYYGTF-RKSAVVSGRRPFKKDSDL-NYEHDSEAEWEEEE-GEDIQDVEDDKELANEEAELRKLYGSDXXXXXXXXXXXXXXXXXXXXXXGDESGVQNGEGEKKEKEGEVIDLTKNTLKDVQKSR--DIVRLKRRKLSVGSVVIEGVSFTGASKLDAYPVSTFTDSKPIQMFNPFVFAASDIVSEHLKAKVPSTRPARPSNIDEKAKLDLAVALVNDGSNRDRIVF----QFCESRRTRGLNVPAKSEVIRAISEMATREKRDGDTRAVWHLNDAKLEKM 787
            K   V  R + GP+KLLQF +NYRP Y+GT+ +KS+ VS R P ++D DL +YE DS+ EWEEEE GE +   E                G DXXXXXXXXXXXX           DE  ++  EG          DL K  L+   K+R  D +   ++K+ V   V+ G  + G       P S       + +  P   A S +  E L  K+             + KL   + L++  +N  +++     +FC     R  N+P + ++ R I   A  EKR    R  W+++   L ++
Sbjct:  260 KADGVPDRTRYGPMKLLQFHKNYRPAYWGTWSKKSSYVSPRCPLRRDKDLLDYEVDSDEEWEEEEPGESLSHSE----------------GEDXXXXXXXXXXXXGFFVPHGYLSNDEGALEEEEGG---------DLEKQKLRQTLKAREWDELMSTKKKMKVLEPVVRGCIWEGEG-----PGSEHLQPYAVCLVEPLPKADSSLSPEQLSQKL-------------EEKLKYLLPLLHGNANSSKVIISEYQEFC-----RPENIPTRIQLRRLIKNNAVYEKRSTYRRCCWYVHTDVLSRL 516          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A2I4D0R9_9TELE (chromatin assembly factor 1 subunit A n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4D0R9_9TELE)

HSP 1 Score: 78.2 bits (191), Expect = 4.360e-11
Identity = 99/320 (30.94%), Postives = 144/320 (45.00%), Query Frame = 0
Query:  495 DVRGRRKLGPIKLLQFDENYRPGYYGTF-RKSAVVSGRRPFKKDSDL-NYEHDSEAEWEEEE-GEDIQDVEDDKELANEEAELRKLYGSDXXXXXXXXXXXXXXXXXXXXXXGDESGVQNGEGEKKEKEGEVIDLTKNTLKDVQKSR--DIVRLKRRKLSVGSVVIEGVSFT----GASKLDAYPVSTFTDSKPIQMFNPFVFAASDIVSEHLKAKVPSTRPARPSNIDEKAKLDLAVALVNDGSNRDRIVF----QFCESRRTRGL-----------NVPAKSEVIRAISEMATREKRDGDTRAVWHLNDAKLEKMVQQ 790
            D+  R++ GP+KLLQF ENYRP Y+GT+ +KS+ +S R PF++D D+ +YE DS+ EWEEEE GE +   E                G DXXXXXXXXXXXXX          D+ GV          E E  DL K  L+   K+R  D +   ++K+ V   V+ G  +     G   L  Y V          +  P   A S    E L  K          +  E+  L   + L++  SN  +I+     +FC  + +              N+P + ++ R I + A  EKR    R  W+++   L +  Q+
Sbjct:  484 DIPDRQRYGPMKLLQFHENYRPAYWGTWSKKSSQISPRCPFRQDMDIFDYEVDSDEEWEEEEPGESLSHSE----------------GEDXXXXXXXXXXXXXGFFVPHGYLSDDEGVLE--------EEESGDLEKQKLRQTLKAREWDELMSSKKKMKVLEPVVRGCVWEEEGCGLESLQLYAVC---------LVEPLPTAESSPSPEELLQK----------DQKEEQLLGQLLPLLHGNSNSSKIIINEFQEFCRQQNSSSPTSDSANQSSPENIPTRVQIKRLIRKNAVYEKRSSFRRCCWYVHAEVLSRFGQE 760          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A6P7MFT6_BETSP (chromatin assembly factor 1 subunit A isoform X1 n=3 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MFT6_BETSP)

HSP 1 Score: 76.6 bits (187), Expect = 1.320e-10
Identity = 97/322 (30.12%), Postives = 144/322 (44.72%), Query Frame = 0
Query:  492 KRADVRGRRKLGPIKLLQFDENYRPGYYGTF-RKSAVVSGRRPFKKDSDL-NYEHDSEAEWEEEE-GEDIQDVEDDKELANEEAELRKLYGSDXXXXXXXXXXXXXXXXXXXXXXGDESGVQNGEGEKKEKEGEVIDLTKNTLKDVQKSR--DIVRLKRRKLSVGSVVIEGVSFTGASKLDAYPVSTFTDSKPIQMFNPFVFAASDIVSEHLKAKV-PSTRPARPSNIDEKAKLDLAVALVNDGSNRDRIVF----QFCESRRTRGL--------------NVPAKSEVIRAISEMATREKRDGDTRAVWHLNDAKLEKMVQ 789
            K+  V  R + GP+KLLQF ENYRP Y+GT+ +KS+ +S R PF+ D DL +YE DS+ EWEEEE GE +   E                G DXXXXXXXXXXXX           DE  ++  +G          DL K  L+   K+R  D +   ++K+ V   V+ G  + G             D + + +F P+V     +V    KA + PS+  A      E+  L   + L++   N  +++     + C  + +  L              N+P +  + R I   A  EKR    R  W+++   L +  Q
Sbjct:  474 KQEGVPDRERYGPMKLLQFHENYRPAYWGTWNKKSSHISSRCPFRLDKDLLDYEVDSDEEWEEEEPGESLSHSE----------------GEDXXXXXXXXXXXXGFFVPHGYLSEDEGALEEEDGG---------DLEKQKLRQKLKAREWDELMSTKKKMKVLEPVVHGCIWEG-------------DGRSLDLFQPYVVC---LVEPLPKADISPSSDEAAQKFQREEQLLGQLLPLLHGNLNSSKVIISEFQELCRRQTSTSLSSPSEPSSPQNPAENIPTRIHLKRLIKNNAVYEKRTTYRRCCWYVHSEVLTRFGQ 754          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A368PZA7_SETIT (Uncharacterized protein n=11 Tax=Setaria TaxID=4554 RepID=A0A368PZA7_SETIT)

HSP 1 Score: 74.7 bits (182), Expect = 5.010e-10
Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = 0
Query:  506 KLLQFDENYRPGYYGTFRK-SAVVSGRRPFKKDSDLNYEHDSEAEWEEEE-GEDIQDVEDDKELANE 570
            KLLQFD ++RP YYGT+RK S+ VSGR+PF++D +LNY+ +S+ EWEEE+ GE + D E+D E  NE
Sbjct:  493 KLLQFDRSFRPAYYGTWRKKSSTVSGRQPFQRDPELNYDVESDEEWEEEDSGERLSDFEEDDETMNE 559          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A2G9HSX6_9LAMI (Chromatin assembly factor-I n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HSX6_9LAMI)

HSP 1 Score: 73.2 bits (178), Expect = 1.520e-9
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  499 RRKLGPIKLLQFDENYRPGYYGTF-RKSAVVSGRRPFKKDSDLNYEHDSEAEWEEEE-GEDIQD 560
            R+++G ++LLQFD++YRP +YG + RKS VV  RRPF KD DL+YE DS+ EWEEEE GE + D
Sbjct:  488 RKRIGAMQLLQFDKSYRPAFYGVWPRKSQVVRARRPFVKDPDLDYEIDSDEEWEEEEPGESLSD 551          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A8H8A646_9ASCO (Uncharacterized protein n=1 Tax=Pneumocystis sp. 'macacae' TaxID=2698480 RepID=A0A8H8A646_9ASCO)

HSP 1 Score: 72.4 bits (176), Expect = 1.930e-9
Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  495 DVRGRRKLGPIKLLQFDENYRPGYYGTFRK-SAVVSGRRPFKKDSDL-NYEHDSEAEW-EEEEGEDIQDVEDDKE 566
            D+  + K+ P+KLLQF E+ RP YYGTF K S +++ R PFK D +L NY +DSEAEW EEEEGEDI  + D  E
Sbjct:  304 DLLNKLKIFPMKLLQFKEDVRPPYYGTFSKLSTILTPRNPFKTDENLFNYNYDSEAEWIEEEEGEDINSINDSDE 378          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A899FWF7_9ASCO (Uncharacterized protein n=1 Tax=Pneumocystis wakefieldiae TaxID=38082 RepID=A0A899FWF7_9ASCO)

HSP 1 Score: 72.8 bits (177), Expect = 2.080e-9
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 0
Query:  495 DVRGRRKLGPIKLLQFDENYRPGYYGTFRK-SAVVSGRRPFKKDSDL-NYEHDSEAEW-EEEEGEDIQDVED 563
            D+  + K+ P+KLLQF E+ RP YYGTF K S+V++ R PFK D  L NY +DSEAEW EEEEGEDI +++D
Sbjct:  271 DLLNKLKMFPMKLLQFKEDIRPPYYGTFSKPSSVLTPRNPFKIDESLLNYSYDSEAEWIEEEEGEDIDNIDD 342          
BLAST of Gcaud7451.t1 vs. uniprot
Match: A0A0W4ZN50_PNEC8 (Uncharacterized protein n=1 Tax=Pneumocystis carinii (strain B80) TaxID=1408658 RepID=A0A0W4ZN50_PNEC8)

HSP 1 Score: 72.0 bits (175), Expect = 2.140e-9
Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
Query:  495 DVRGRRKLGPIKLLQFDENYRPGYYGTFRKSA-VVSGRRPFKKDSDL-NYEHDSEAEW-EEEEGEDIQDVED 563
            D+  + K+ P+KLLQF E+ RP YYGTF KS+ +++ R PFK D  L NY++DSEAEW EEEEGEDI +++D
Sbjct:  231 DLLNKLKIFPMKLLQFKEDVRPPYYGTFSKSSFILTPRNPFKIDKGLFNYDYDSEAEWIEEEEGEDIDNMDD 302          
The following BLAST results are available for this feature:
BLAST of Gcaud7451.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5S8_9FLOR3.250e-29367.24Chromatin assembly factor 1 subunit FSM n=1 Tax=Gr... [more]
R7Q4K3_CHOCR9.610e-8638.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A8D3B8F5_SCOMX1.470e-1131.15Chromatin assembly factor 1, subunit A (p150) n=2 ... [more]
A0A2I4D0R9_9TELE4.360e-1130.94chromatin assembly factor 1 subunit A n=1 Tax=Aust... [more]
A0A6P7MFT6_BETSP1.320e-1030.12chromatin assembly factor 1 subunit A isoform X1 n... [more]
A0A368PZA7_SETIT5.010e-1058.21Uncharacterized protein n=11 Tax=Setaria TaxID=455... [more]
A0A2G9HSX6_9LAMI1.520e-959.38Chromatin assembly factor-I n=1 Tax=Handroanthus i... [more]
A0A8H8A646_9ASCO1.930e-956.00Uncharacterized protein n=1 Tax=Pneumocystis sp. '... [more]
A0A899FWF7_9ASCO2.080e-958.33Uncharacterized protein n=1 Tax=Pneumocystis wakef... [more]
A0A0W4ZN50_PNEC82.140e-956.94Uncharacterized protein n=1 Tax=Pneumocystis carin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..352
NoneNo IPR availableCOILSCoilCoilcoord: 551..571
NoneNo IPR availableCOILSCoilCoilcoord: 446..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 568..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..608
NoneNo IPR availablePANTHERPTHR15272CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT Acoord: 496..617
NoneNo IPR availablePANTHERPTHR15272:SF0CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT Acoord: 496..617
IPR022043Chromatin assembly factor 1 subunit APFAMPF12253CAF1Acoord: 506..571
e-value: 1.6E-21
score: 76.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_523_length_23072_cov_4.281145contigNODE_523_length_23072_cov_4.281145:13712..16150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7451.t1Gcaud7451.t1Gracilaria caudata M_176_S67 malemRNANODE_523_length_23072_cov_4.281145 13712..16150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7451.t1 ID=Gcaud7451.t1|Name=Gcaud7451.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=813bp
MSAYDAAIRQMGHAVSRASPAAAIPSHPATTPHSYQENRIASHQPLLRQT
YVSPLPTYVQNHPQLNTSQSLPQPSATISSTAAASLPHAVVPKNFEHSQC
HPVMPGIPTSSNAHEQQNKQFSRSRLTPHPKEPTLMHYYERLDKTVQQAI
EFSRKLRYPTECAPPDCSQIARVVAHDLQGVLGSGVDSLLAKQASNKQYL
EAFTSKVAGDFVEYGVSGTHLLFMADALIATADSPVNTMQPPISPRQTHS
HPIVERARVRVFEAEITHLPLAFVEQLVKTRRSMRRFKSRIELHVRIILA
LEGKGRRVSDAQLDRLKLQLEKADQQAENERKRRMAAEAAKLEKERRAKD
AAKQSEKNGLREKQLKKRRRQEHAQASFMKRFVKPKTEDRQREDAQEVHY
VPRNRSGHYAQEVAEDPDVMSVHWWLRSEIQFVSLPILEEMFKEGANDLK
SHLKDCAARREAAEKAVNSVLHDYRSQRRVPCDDRYPRFARKRADVRGRR
KLGPIKLLQFDENYRPGYYGTFRKSAVVSGRRPFKKDSDLNYEHDSEAEW
EEEEGEDIQDVEDDKELANEEAELRKLYGSDDEDDDDFLDDDEAADDDED
DEEGDESGVQNGEGEKKEKEGEVIDLTKNTLKDVQKSRDIVRLKRRKLSV
GSVVIEGVSFTGASKLDAYPVSTFTDSKPIQMFNPFVFAASDIVSEHLKA
KVPSTRPARPSNIDEKAKLDLAVALVNDGSNRDRIVFQFCESRRTRGLNV
PAKSEVIRAISEMATREKRDGDTRAVWHLNDAKLEKMVQQMGNVRETVVV
ARPITTPLSAMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022043CAF1A