Gcaud7525.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7525.t1
Unique NameGcaud7525.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length179
Homology
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A2V3IXK8_9FLOR (Putative plastid-lipid-associated protein 4, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK8_9FLOR)

HSP 1 Score: 254 bits (650), Expect = 1.080e-83
Identity = 122/178 (68.54%), Postives = 148/178 (83.15%), Query Frame = 0
Query:    1 MNIKAPSVFKEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFILVKK 178
            M++ AP+ FK+AL++ V PLNFGR VA++P ++ +IE LARQVEATN S SPG+DPNLSGVWDM+YTTS SIL+   P FLQS RIVQEI+AA LKGRN+ETF+FGP +F N+VNFEL+ AS  +FDV FV+FV+ N  R+NV+ N RFTGWLEVTYLDED RISRGN GNLFIL+KK
Sbjct:   37 MSVTAPNTFKQALLEKVHPLNFGRDVADNPAEQLDIEQLARQVEATNKSLSPGTDPNLSGVWDMVYTTSKSILATGSPGFLQSRRIVQEINAAVLKGRNSETFRFGPLQFDNAVNFELNPASEKRFDVNFVEFVLLNFIRVNVRENMRFTGWLEVTYLDEDLRISRGNAGNLFILIKK 214          
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A2V0PG82_9CHLO (PAP_fibrillin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PG82_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 1.600e-30
Identity = 80/180 (44.44%), Postives = 107/180 (59.44%), Query Frame = 0
Query:    1 MNIKAPSVF--KEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQ-SSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFILVK 177
            M+ K+ S+   K+ L+D + PL  G  VA  P +   +E++A  +E  N + SP + P L+G W + YTTS SIL  N PAFL+ S  I Q ID   L+ +N ET  F      NSV  ELS  S SK  V+F QF IFNL  +    + R  G LEVT+LD+  R+SRG++GNLFILV+
Sbjct:   41 MSSKSASIATKKQELLDYIAPLQRG--VAASPEQAARVEEMAAALERLNPTPSPLASPLLNGRWRLEYTTSQSILGTNKPAFLRPSGPIYQFIDGPGLRAKNQETAPF-----YNSVTAELSPMSKSKVAVQFKQFKIFNLLPVTAPPSAR--GELEVTFLDDSLRVSRGDKGNLFILVQ 211          
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A7N0RH08_KALFE (PAP_fibrillin domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RH08_KALFE)

HSP 1 Score: 116 bits (290), Expect = 8.430e-29
Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 0
Query:   10 KEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            KE L++ + PL+ G      P  ++ I+ LAR++EA N    P     L+G W++IYTTS+SIL    P FL+S    Q I+   L+ +N E+F F      N V  +L+  SPSK  VKF  F I  L  I VK  +R  G L++TYLDED RISRG++GNLFIL
Sbjct:   86 KEELLEAIAPLDRGAEAT--PEDQERIDQLARKLEAANRVKEPLKSDLLNGKWELIYTTSTSILQRERPKFLRSRTNYQAINVDTLRAQNQESFPF-----FNQVTADLTPLSPSKVAVKFDYFKILGL--IPVKAPDRARGELDITYLDEDLRISRGDKGNLFIL 242          
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A067L464_JATCU (PAP_fibrillin domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L464_JATCU)

HSP 1 Score: 114 bits (285), Expect = 3.790e-28
Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 0
Query:    4 KAPSVFKEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K   V KE +++ + PL+ G   + +   +Q ++++ARQ+EA N +  P     L+G W++IYTTS SIL    P FL+S    Q I+A  L+ +N E+F F      N V  +L+  +  K  VKF +F I  L  I +K   R  G LE+TYLDE+ RISRG++GNLFIL
Sbjct:   72 KDAKVLKEEILEAIAPLDRGADASFED--QQRVDEIARQLEAVNPTKEPLKSNLLNGKWELIYTTSQSILQTQRPKFLRSRTNYQAINADTLRAQNMESFPF-----FNQVTADLTPLNAKKVAVKFDKFKIAGL--IPIKAPGRARGELEITYLDEELRISRGDKGNLFIL 234          
BLAST of Gcaud7525.t1 vs. uniprot
Match: UPI001CC69F2D (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC69F2D)

HSP 1 Score: 114 bits (285), Expect = 4.160e-28
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 0
Query:    4 KAPSVFKEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K     K+ L++ + PL+ G   +  P  +QE++ +ARQ+E  N +  P     L+G W++IYTTS SIL    P FL+SS   Q I+   L+ +N E++ F      N V  +L+  +P K  VKF  F I  L  I      RF G LE+TYLD++ RISRG++GNLFIL
Sbjct:   75 KDTKTLKDELLETIAPLDRGANAS--PEDQQEVDQIARQLEVVNPTKEPLKSDLLNGKWELIYTTSRSILQTERPKFLRSSVNYQAINVDTLRAQNMESWPF-----FNQVTADLTPLNPRKVAVKFDYFKILGLIPIKAPERARF-GELEITYLDDELRISRGDKGNLFIL 238          
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A218X3V7_PUNGR (probable plastid-lipid-associated protein 4, chloroplastic n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218X3V7_PUNGR)

HSP 1 Score: 114 bits (285), Expect = 4.660e-28
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 0
Query:    4 KAPSVFKEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K     KE L+D + PL+ G      P  +Q ++++AR++EA N +  P   P L+G W++IYTTS SIL    P FL+S+   Q I+   L+ +N E++ F      N V  +L+  +  K  VKF  F I  L  I +K   R  G LE+TYLDE+ R+SRG++GNLFIL
Sbjct:   75 KDAQALKEELLDAIAPLDRGAEAT--PEDQQRVDEMARRLEAANPTKEPLKSPLLNGKWELIYTTSQSILQTQRPKFLRSTTNYQGINVDTLRAQNMESWPF-----FNQVTADLTPLNSRKVAVKFDYFKIAGL--IPIKAPGRARGELEITYLDEELRVSRGDKGNLFIL 237          
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A1Q3AZQ2_CEPFO (PAP_fibrillin domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AZQ2_CEPFO)

HSP 1 Score: 114 bits (285), Expect = 4.770e-28
Identity = 72/172 (41.86%), Postives = 99/172 (57.56%), Query Frame = 0
Query:    4 KAPSVFKEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K   V KE L+  + PL+ G      P  +Q ++ +AR++EA N +  P     L+G W++IYTTS SIL    P FL+SS+  Q I+   L+ +N E++ F      N V  +L+  + +K  VKF  F I  L  I VK   R  G LE+TYLDED RISRG++GNLFIL
Sbjct:   82 KDAKVIKEELLQAIAPLDRGADAT--PEDQQRVDQIARKLEAVNPTKEPLKSDLLNGKWELIYTTSQSILQNQRPKFLRSSKNFQAINTDTLRAQNMESWPF-----FNQVTADLTPLNSNKVAVKFDYFKIAGL--IPVKAPERARGELEITYLDEDLRISRGDKGNLFIL 244          
BLAST of Gcaud7525.t1 vs. uniprot
Match: A0A5N6PKD6_9ASTR (PAP_fibrillin domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD6_9ASTR)

HSP 1 Score: 111 bits (278), Expect = 2.480e-27
Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 0
Query:   10 KEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K+ L+D + PL+ G   +  P  +Q IE + R++EA N +  P   P L G W++IYTTS SIL    P FL+SS   Q I+   L+ +N E+F        N V  +L+  +  K  VKF  F I  L  I VK  +   G LE+TYLDE+ R+SRG++GNLFIL
Sbjct:   56 KQELLDAIDPLDRGADAS--PEDQQTIEQIVRKLEAANRTKEPLKSPLLDGKWELIYTTSQSILQTKRPKFLRSSVNYQAINLGTLRAQNMESFPT-----FNQVTADLTPVNTKKVAVKFDYFKILGL--IPVKAPDTARGSLEITYLDEELRVSRGDKGNLFIL 212          
BLAST of Gcaud7525.t1 vs. uniprot
Match: UPI00053C4D93 (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4D93)

HSP 1 Score: 112 bits (279), Expect = 2.950e-27
Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 0
Query:   10 KEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K+ L D + PLN G +    P  +  ++ +A+++EA N + +P     L+G W++IYTTS SIL +  P  L+S    Q IDA  LK +N ETF F      NSV   L   +P K  VKF +F I  L  +N     R  G LE+TYLDE+ R+SRG++GNLFIL
Sbjct:   77 KQDLFDAIAPLNRGASAT--PNDQLRVDQIAQKLEAVNPTKAPLKSDLLNGKWELIYTTSVSILQLKKPRLLRSITNYQAIDADTLKVQNMETFPF-----FNSVIGNLKPLNPRKVAVKFERFRILGLIPVNAPDTAR--GELEITYLDEELRVSRGDKGNLFIL 233          
BLAST of Gcaud7525.t1 vs. uniprot
Match: UPI001CB9BE2F (probable plastid-lipid-associated protein 4, chloroplastic n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9BE2F)

HSP 1 Score: 111 bits (278), Expect = 4.160e-27
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 0
Query:   10 KEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSFSPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNAETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFTGWLEVTYLDEDFRISRGNEGNLFIL 175
            K+ L+D + PL+ G   + +   +Q IE + R++EA N +  P   P L+G W++IYTTS SIL    P FL+S    Q I+A  L+ +N E+F        N V  +L+  +  K  VKF  F IF L  I VK      G LEVTYLDE+ R+SRG++GNLF+L
Sbjct:   78 KQELLDAIDPLDRGADASLED--QQSIEQIVRKLEAANPTKEPLKSPLLNGKWELIYTTSQSILQTKRPKFLRSRVNYQAINADTLRAQNLESFPT-----FNQVTADLTPVNSKKVAVKFDYFKIFGL--IPVKAPETAVGSLEVTYLDEELRVSRGDKGNLFVL 234          
The following BLAST results are available for this feature:
BLAST of Gcaud7525.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXK8_9FLOR1.080e-8368.54Putative plastid-lipid-associated protein 4, chlor... [more]
A0A2V0PG82_9CHLO1.600e-3044.44PAP_fibrillin domain-containing protein n=1 Tax=Ra... [more]
A0A7N0RH08_KALFE8.430e-2943.98PAP_fibrillin domain-containing protein n=1 Tax=Ka... [more]
A0A067L464_JATCU3.790e-2840.70PAP_fibrillin domain-containing protein n=1 Tax=Ja... [more]
UPI001CC69F2D4.160e-2840.12probable plastid-lipid-associated protein 4, chlor... [more]
A0A218X3V7_PUNGR4.660e-2840.12probable plastid-lipid-associated protein 4, chlor... [more]
A0A1Q3AZQ2_CEPFO4.770e-2841.86PAP_fibrillin domain-containing protein n=1 Tax=Ce... [more]
A0A5N6PKD6_9ASTR2.480e-2741.57PAP_fibrillin domain-containing protein n=1 Tax=Mi... [more]
UPI00053C4D932.950e-2742.17probable plastid-lipid-associated protein 4, chlor... [more]
UPI001CB9BE2F4.160e-2741.57probable plastid-lipid-associated protein 4, chlor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 9..175
e-value: 3.9E-30
score: 105.3
NoneNo IPR availablePANTHERPTHR31906:SF14PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATEDcoord: 6..175
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 6..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_51_length_65224_cov_4.623524contigNODE_51_length_65224_cov_4.623524:22138..22674 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7525.t1Gcaud7525.t1Gracilaria caudata M_176_S67 malemRNANODE_51_length_65224_cov_4.623524 22138..22674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7525.t1 ID=Gcaud7525.t1|Name=Gcaud7525.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=179bp
MNIKAPSVFKEALVDLVQPLNFGRTVANDPVKRQEIEDLARQVEATNTSF
SPGSDPNLSGVWDMIYTTSSSILSVNIPAFLQSSRIVQEIDAAELKGRNA
ETFKFGPFEFVNSVNFELSSASPSKFDVKFVQFVIFNLFRINVKRNNRFT
GWLEVTYLDEDFRISRGNEGNLFILVKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP