Gcaud7538.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7538.t1
Unique NameGcaud7538.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length252
Homology
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A2V3IXR8_9FLOR (Zinc finger CCCH domain-containing protein 21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXR8_9FLOR)

HSP 1 Score: 338 bits (866), Expect = 8.280e-115
Identity = 209/251 (83.27%), Postives = 222/251 (88.45%), Query Frame = 0
Query:    1 MPPKXXXXXXXXXXIVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTVLKADNDDIGSIGEDRTAFPDVQPDASLFEGEAADALQEPTEVTVGDESLFT 251
            MPPKXXXXXXXXXXIVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAA+NARLAQMQARLAELELMNQPVKDKPKK+SAEEAE KRLEEEAEKERIRIANLPVEDQIEEERVKLT+RTPVT ERFLEWKEEK         AKKAA+ KKMSKAER RGQGLTGR+LFQSN+E+FVDD+ ADDTVLKA+ D  GS  E+ +    VQPDASLF G+A D+L E  EVTVGDESLFT
Sbjct:    1 MPPKXXXXXXXXXXIVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAANNARLAQMQARLAELELMNQPVKDKPKKLSAEEAECKRLEEEAEKERIRIANLPVEDQIEEERVKLTTRTPVTLERFLEWKEEKVKEKLAAGEAKKAASMKKMSKAERTRGQGLTGRQLFQSNSELFVDDDAADDTVLKANLDYTGSEDENEST---VQPDASLFGGDAGDSLHEAGEVTVGDESLFT 248          
BLAST of Gcaud7538.t1 vs. uniprot
Match: R7Q5F5_CHOCR (DFRP_C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5F5_CHOCR)

HSP 1 Score: 203 bits (517), Expect = 1.080e-61
Identity = 145/261 (55.56%), Postives = 171/261 (65.52%), Query Frame = 0
Query:    1 MPPKXXXXXXXXXXIVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTVLKADNDDIG---------SIGEDRTAFPDVQPDASLFEGEAADALQEPTE-VTVGDESLFT 251
            MPPKXXXXXXXXXXIVEDKTFGLKNKKKS+KVQQYVETVKKQASQKVDGPR++   +GS SA   AR+AQMQARLAELELMNQPV+DKPKK+SA E                  NLPVED          ++TPVT ERF++W+ EK         A++AAAYKKMSKAER+RGQGLTG+ELF++++ +FVDDE A D  LK  +D IG         + G+     P             A     P+E V VGDESLF+
Sbjct:    1 MPPKXXXXXXXXXXIVEDKTFGLKNKKKSKKVQQYVETVKKQASQKVDGPRRKGGASGSGSAXXAARMAQMQARLAELELMNQPVQDKPKKMSAAEXXXXXXXXXXXXXXXXXXNLPVEDXXXXXXXXXKTKTPVTLERFMKWRAEKNKENQVKVEAERAAAYKKMSKAERSRGQGLTGKELFEAHSGLFVDDENAVDEKLKPISDYIGDDSDVNAEDTEGDGEEVTPGXXXXXXXXXXXXAGPSSAPSEAVAVGDESLFS 261          
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A7S1TF65_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF65_9RHOD)

HSP 1 Score: 152 bits (385), Expect = 8.550e-42
Identity = 129/276 (46.74%), Postives = 160/276 (57.97%), Query Frame = 0
Query:    1 MPPKXXXXXXXXXXIVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEK-------ERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTVLKADNDDIGSIGED------------------RTAFPDVQPDASLFEGEAADALQEPTEVTVGDESLFT 251
            MPPK          IVEDKTFGLKNK KS+KVQQYV  V+KQA Q+V G + R       +    ++ A + AR+AEL+++ +PVK+K K   +EEA   RL EE          ER+RI +LPVE+QIE ER +L  RTPVT E F++WKEE  XXXXXXXX    AA K +SK ERARG GL+GRELF  N ++FVDDE ADDT  +   D I    ED                  RT   DV  +    EG+A +  +    VTVGDE LF+
Sbjct:    1 MPPKAAQKKVEK--IVEDKTFGLKNKNKSKKVQQYVAQVQKQAKQQVGGNKPRRVTDAEEAEKKTSKKAMLAARMAELDMVLKPVKEKDK---SEEA---RLAEEXXXXXXXXXXERLRILSLPVEEQIEAERERLKVRTPVTLELFMQWKEEXXXXXXXXXXXXXEAALKGLSKVERARGTGLSGRELFAVNKQVFVDDEAADDTKYEVPIDYIDESDEDPSQPGFDTDDDGVEDVARRTTALDVDDETEPGEGDAEEE-EGAAGVTVGDEELFS 267          
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A1X6NNY8_PORUM (DFRP_C domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNY8_PORUM)

HSP 1 Score: 140 bits (354), Expect = 2.470e-37
Identity = 95/189 (50.26%), Postives = 115/189 (60.85%), Query Frame = 0
Query:   16 VEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLA----QMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTV 200
            VEDKTFGLKNK KS+KVQQ+V+ V+KQA+ + +  R                       + AR+ EL L  QPV DKPKK   E A R   EEEAE ER+RI +LPVEDQIE ER KL +RTPVT + FL W+  K+           A   K +SKAER+RG GLTGRELF ++ E+F DDEEAD  V
Sbjct:   18 VEDKTFGLKNKNKSKKVQQFVQRVEKQATDQANNKRSXXXXXXXXXXXXXXXXXXXXXMLAARMEELSLFAQPVVDKPKKADEEAAARXXAEEEAELERLRILSLPVEDQIETERAKLKTRTPVTIDAFLAWRTTKRAERAAREKVAAAERLKGLSKAERSRGGGLTGRELFTAHQELFEDDEEADQEV 206          
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A7S2ZL12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL12_9RHOD)

HSP 1 Score: 140 bits (352), Expect = 5.160e-37
Identity = 103/206 (50.00%), Postives = 127/206 (61.65%), Query Frame = 0
Query:    1 MPPKXXXXXXXXXX-IVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSS-SAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKK--MSKAERARGQGLTGRELFQSNAEIFVDDEEADDTVLK 202
            MPPK           +VEDKTFGLKNK KS+KVQQYV  V+KQA  K     K+S   GSS S  S  +L  ++AR+AEL L+ +PVK+K KK+S EEA             +RIA+LPVEDQIEEER KL ++TPVT E FL WK EKK         KK AA K   ++K +  +G  LTGRELF+ N E+FVDD  ADD + +
Sbjct:    1 MPPKSKKEKQKETKKLVEDKTFGLKNKNKSKKVQQYVSQVEKQAQHKATQGEKKSGSDGSSGSKLSKKQL--LEARMAELNLVYRPVKEKEKKMSPEEAXXXXXXXXXXXXXLRIASLPVEDQIEEERAKLKTKTPVTLELFLAWK-EKKAAERITATEKKVAAAKSGGLTKHDLKKGGLLTGRELFEYNREVFVDDANADDEIYE 203          
BLAST of Gcaud7538.t1 vs. uniprot
Match: M2XC07_GALSU (Zinc finger (CCCH-type) family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XC07_GALSU)

HSP 1 Score: 112 bits (279), Expect = 6.100e-26
Identity = 84/183 (45.90%), Postives = 110/183 (60.11%), Query Frame = 0
Query:   15 IVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEAD 197
            IVEDKTFGLKNK KS+KVQ YV+ VKKQA+QKV+G + R              L  ++AR AEL L+ +PVK+K K  + E +         E ER RIANLP+E+QIEE R KL +   VTKE F EW + +          ++ +  KK S++ + +   LTGRELF    E+FVDDE+AD
Sbjct:   61 IVEDKTFGLKNKNKSKKVQSYVQQVKKQAAQKVEGNKPRXXXXXXXXXXXXKAL--LEARAAELGLIMKPVKEKEK--TEEISXXXXXXXXXELERQRIANLPIEEQIEEHRKKLDTTKKVTKEIFSEWLQNR---------TEQVSDKKKKSQSAKGKAAPLTGRELFTKQKELFVDDEDAD 230          
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A7S0G636_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G636_9RHOD)

HSP 1 Score: 90.5 bits (223), Expect = 1.280e-19
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 0
Query:   56 GAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEK 147
            G+  SS +  ++  Q++AR+AEL L+ +PVK+K KKIS EEAE+KR+      ER+RIA+LPVEDQIEEER KL +RTPVT E FL WKE+K
Sbjct:    6 GSDGSSGSKLSKKQQLEARMAELNLVYRPVKEKEKKISPEEAEKKRIXXXXXXERLRIASLPVEDQIEEERAKLQTRTPVTLELFLAWKEKK 97          
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A5J4YNP1_PORPP (Zinc finger CCCH domain-containing protein 11 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNP1_PORPP)

HSP 1 Score: 83.6 bits (205), Expect = 2.270e-15
Identity = 50/88 (56.82%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  111 IRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADD 198
            +RIA LPVEDQIE ER KLT+RTPVT E F  WK+ KK       X       K MSK ++ +G GLTG ELF+ N   FVDDEEADD
Sbjct:  125 LRIAALPVEDQIEIEREKLTTRTPVTLELFNAWKDRKKAERQAREXXXXXXRMKNMSKVDKQKGGGLTGMELFEFNQSAFVDDEEADD 212          
BLAST of Gcaud7538.t1 vs. uniprot
Match: A0A6A5BL09_NAEFO (DFRP_C domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BL09_NAEFO)

HSP 1 Score: 78.6 bits (192), Expect = 2.640e-13
Identity = 71/200 (35.50%), Postives = 97/200 (48.50%), Query Frame = 0
Query:   15 IVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERKRLEEEA------EKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTVLKADNDDI 208
            I+EDKTFGLKNK KS+KVQQ ++++     Q  D   K+                Q +  L +L       K + +   A  +E    E E       E+E    A L +E+ +E+ER K+ S TPVT E F +WK+ K          +K   +K         G GL+GRELF+ N  +FVDDEEADDTV +   D I
Sbjct:   18 IIEDKTFGLKNKNKSKKVQQQIKSITNTVMQVHDKKVKKELEEKERKRLEKLAQKQREQELKDLFRTTDGGKKEDEVAQASSSEETPTEGEEVTYDSIEQEIKDEAELTIEEIVEKERAKIISGTPVTFETFTKWKQFK----VEQQRKEKEREHKLQMALYEKSGHGLSGRELFKLNQSLFVDDEEADDTVYQIPEDAI 213          
BLAST of Gcaud7538.t1 vs. uniprot
Match: D2V717_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V717_NAEGR)

HSP 1 Score: 73.2 bits (178), Expect = 1.870e-11
Identity = 74/204 (36.27%), Postives = 103/204 (50.49%), Query Frame = 0
Query:   18 DKTFGLKNKKKSRKVQQYVETVKKQASQKVDGPRKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISA---EEAERKRLEEEAEKERIRI----------ANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKXXXXXXXXAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTVLKADNDDI 208
            ++TFGLKNK KS+ VQ YV++V    +Q  D   K+             RL ++  +  E EL     KD  K I     E+AE    EE  E E +            A L +E+ +E+ER K+   TPVT E F +WK+ K          K+     +M+  E++ GQGL+GRELF+ N  +FVDDEEAD+TV +   D I
Sbjct:   12 EQTFGLKNKNKSKTVQTYVKSVSNTVNQVHDKKVKQEMAEKEKK-----RLEKLAQKKREQEL-----KDLFKTIDGKKDEKAEEASTEEGQEGEEVTFDSLEQEMADEAELSIEEIVEKERAKIMDGTPVTYESFTKWKQFKVEQQKKEEERKRKL---QMALYEKS-GQGLSGRELFKMNEALFVDDEEADETVYEIPEDAI 201          
The following BLAST results are available for this feature:
BLAST of Gcaud7538.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXR8_9FLOR8.280e-11583.27Zinc finger CCCH domain-containing protein 21 n=1 ... [more]
R7Q5F5_CHOCR1.080e-6155.56DFRP_C domain-containing protein n=1 Tax=Chondrus ... [more]
A0A7S1TF65_9RHOD8.550e-4246.74Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NNY8_PORUM2.470e-3750.26DFRP_C domain-containing protein n=1 Tax=Porphyra ... [more]
A0A7S2ZL12_9RHOD5.160e-3750.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XC07_GALSU6.100e-2645.90Zinc finger (CCCH-type) family protein n=1 Tax=Gal... [more]
A0A7S0G636_9RHOD1.280e-1958.70Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A5J4YNP1_PORPP2.270e-1556.82Zinc finger CCCH domain-containing protein 11 n=1 ... [more]
A0A6A5BL09_NAEFO2.640e-1335.50DFRP_C domain-containing protein n=2 Tax=Naegleria... [more]
D2V717_NAEGR1.870e-1136.27Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableCOILSCoilCoilcoord: 85..114
NoneNo IPR availableGENE3D6.20.400.10coord: 96..188
e-value: 2.2E-11
score: 45.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..35
NoneNo IPR availablePANTHERPTHR12681ZINC FINGER-CONTAINING PROTEIN P48ZNFcoord: 1..92
NoneNo IPR availablePANTHERPTHR12681:SF0ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15coord: 1..92
NoneNo IPR availablePANTHERPTHR12681ZINC FINGER-CONTAINING PROTEIN P48ZNFcoord: 99..206
NoneNo IPR availablePANTHERPTHR12681:SF0ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15coord: 99..206
IPR032378ZC3H15/TMA46 family, C-terminalPFAMPF16543DFRP_Ccoord: 117..202
e-value: 6.3E-18
score: 65.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_51_length_65224_cov_4.623524contigNODE_51_length_65224_cov_4.623524:49005..49760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7538.t1Gcaud7538.t1Gracilaria caudata M_176_S67 malemRNANODE_51_length_65224_cov_4.623524 49005..49760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7538.t1 ID=Gcaud7538.t1|Name=Gcaud7538.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=252bp
MPPKKKKAEEQKKKIVEDKTFGLKNKKKSRKVQQYVETVKKQASQKVDGP
RKRSAGAGSSSAASNARLAQMQARLAELELMNQPVKDKPKKISAEEAERK
RLEEEAEKERIRIANLPVEDQIEEERVKLTSRTPVTKERFLEWKEEKKKE
KEAEDEAKKAAAYKKMSKAERARGQGLTGRELFQSNAEIFVDDEEADDTV
LKADNDDIGSIGEDRTAFPDVQPDASLFEGEAADALQEPTEVTVGDESLF
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032378ZC3H15/TMA46_C