Gcaud7270.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7270.t2
Unique NameGcaud7270.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length703
Homology
BLAST of Gcaud7270.t2 vs. uniprot
Match: A0A2V3IHG1_9FLOR (Exosome component 10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG1_9FLOR)

HSP 1 Score: 801 bits (2068), Expect = 6.880e-280
Identity = 408/654 (62.39%), Postives = 499/654 (76.30%), Query Frame = 0
Query:    4 SKQACVEVLKGLEKAVRCSQSLPGRDDLELIRVTSSDLRKKGNQLAEHILSEIKSVASRYGVSISSXXXXXXXXXXTGSLSLRDALFDQTAETTDEALQHFNVALDRVRKISNTVVPPQGALGPKKSAPRVGTGNLGRSHGGFLDIEKPQIHFPDYPIDNSDTPFVAPYARDQCIDPGT--HDSNTRKNSSQNVETYLQELYKKNSNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKGLLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKLDSATNEKGGAEEHSNENSLQAEKGVKDKAISINLGKAVKGQDDCSVECASLSPDVPNTDFSLSTSDALGFCDSKRKEITREKTAKSIADGLKLKVTRTSKSVLLDFDSDS 655
            S+Q C ++LK LEKA+RCSQSLP RD+L+LIRVTS  L++  NQL   +LSEIKS+ASRY V I S          T S+S RD+LFD   ETTDEALQHFN ALD  R I N VVPPQGAL P  S  ++GT NLGRS+GGFLD+EKPQ+HFPDYPIDNS  PF+ PY+ +          ++    +SS++V+TYLQELYK NSN +  QRHPYE EI++A Q+M+ K F++ + +V+KPMKSTPC FV +EE+LFN+ ERLK  ++IAVD+ENHSVRSFQGFTCLIQISTREEDI+ID L+LRG+IHRALAPIFTDETIVKVLHGADKDVQWLERDFG+Y VNMFDTGQA+RLLKLPSASLAFLL+HFCDV+   KKKFQLADWRQRP+P +M +YARSDTHYLLYI+DRLR +L+KKGLL K WERSA+++RKRH+K +F+PGIAKHLAARH+L  D+HQIRLLEELCKWRDTTAREEDES PYV+PLKV+FG+VRARDKAR+VEGLLK+GFPGG +PPLIY+NA+KLTELI DALDAK+D     K  A +   +++         K ++I +  +    +D   E AS   D       L +++       K+ E+ R +    I    KL+VT+ S+S LLD D +S
Sbjct:    6 SEQQCGQLLKALEKALRCSQSLPFRDELQLIRVTSPTLKQHTNQLVTQLLSEIKSLASRYAVCIQSSDTDSTSSQSTASISARDSLFDLVTETTDEALQHFNTALDAARNIQNAVVPPQGALNPNASNVKIGTANLGRSYGGFLDLEKPQLHFPDYPIDNSHAPFIPPYSAEHGNQNNVFIQETGDPHSSSRHVDTYLQELYKNNSNSESKQRHPYETEILSAQQEMAKKPFAVEETIVFKPMKSTPCAFVTSEEELFNVAERLKKVTAIAVDIENHSVRSFQGFTCLIQISTREEDIIIDTLKLRGAIHRALAPIFTDETIVKVLHGADKDVQWLERDFGVYVVNMFDTGQASRLLKLPSASLAFLLTHFCDVAAISKKKFQLADWRQRPMPHDMFNYARSDTHYLLYIYDRLRAELAKKGLLEKAWERSASIARKRHKKAQFQPGIAKHLAARHSLGLDEHQIRLLEELCKWRDTTAREEDESLPYVSPLKVIFGVVRARDKARSVEGLLKYGFPGGLVPPLIYKNAEKLTELIRDALDAKIDDRAQAKSAAGQDKRQDT---------KIVNIVIDDSSSSSEDSHTERASSGLDESKGAARLQSAE-------KKVELPRIEFNPDI----KLRVTKLSRSTLLDSDLES 639          
BLAST of Gcaud7270.t2 vs. uniprot
Match: R7Q3D8_CHOCR (Exosome component 10 Rrp6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D8_CHOCR)

HSP 1 Score: 553 bits (1426), Expect = 1.330e-182
Identity = 288/545 (52.84%), Postives = 369/545 (67.71%), Query Frame = 0
Query:    4 SKQACVEVLKGLEKAVRCSQSLPGRDDLELIRVTSSDLRKKGNQLAEHILSEIKSVASRYGVSISSXXXXXXXXXXTGSLSLRDALFDQTAETTDEALQHFNVALDRVRKISNTVVPPQGALGPKKSAPRVGTGNLGRSHGGFLDIEKPQIHFPDYPIDNSDTPFVAPYARDQCIDPGTHDSNTRKNSSQNVETYLQELYKKNSNP---DCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKGLLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKL 545
            SK  CV VLK L +    S  LP  DDLEL+     +      +    + + + + A+ Y   + +          +      +ALFD+  E TDEAL+ FN ALDR R I +      GA+GP+    R+G+G        ++++EKPQ+ FPD+P+DNSDT FV          PG   +        +V+ YLQELY+ NS     + + +HPYE EI  A ++M+ + F     +VY+ MKSTPCTF+ TEE LF +  RLK    +A+D+ENHSVRSFQGFTCLIQ+STR ED+V+DAL LRGS+HRALAPIF DE+IVKVLHGADKDVQWLERDFG++ VNMFDTGQAARLLK PSA+L++L + FCDV+G  KKKFQL+DWRQRPLP +M  YARSDTHYLLYI+DRL+ +L+ K L  K W+RSA V+RKR++K R++ GI +HL A++ L FD HQIRLLEEL  WRD   REEDES  YVAPL  LFGIVRARD+ RTVEGL+K+GFP  ++PP+I  NA ++  LI D+LDAKL
Sbjct:   19 SKAHCVRVLKSLRRTAVESDPLPQGDDLELLHAVCPETSASLRRATRRVRAAVSAAAACY---VPAATDPESESSDSAPSVAAEALFDRVHEATDEALEQFNAALDRARGIQDAEPLETGAVGPET---RLGSGR--HRECAWVEMEKPQMAFPDWPVDNSDTAFVP---------PGVAGA-----KGADVDVYLQELYQANSKASGGEMEGKHPYEEEIRAAEEEMAARVFKKEDTVVYRSMKSTPCTFIKTEEKLFEVANRLKRVGEVAIDIENHSVRSFQGFTCLIQMSTRREDVVVDALALRGSVHRALAPIFADESIVKVLHGADKDVQWLERDFGVFVVNMFDTGQAARLLKFPSAALSYLQARFCDVTGTSKKKFQLSDWRQRPLPDDMFQYARSDTHYLLYIYDRLKTELADKELTAKAWKRSAVVARKRYKKTRYDGGIPRHLCAKYGLGFDAHQIRLLEELYGWRDRKGREEDESLNYVAPLGSLFGIVRARDRVRTVEGLMKYGFPSKSVPPMIKANADEIVRLIVDSLDAKL 541          
BLAST of Gcaud7270.t2 vs. uniprot
Match: A0A7S2ZEH5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZEH5_9RHOD)

HSP 1 Score: 318 bits (814), Expect = 9.570e-94
Identity = 204/542 (37.64%), Postives = 306/542 (56.46%), Query Frame = 0
Query:    5 KQACVEVLKGLEKAVRCSQSLPGRDDLELIRVTSSDLRKKGNQLAEHILSEIKSVASRYGVSISSXXXXXXXXXXTGSLSLRDALFDQTAETTDEALQHFNVALDRVRKISNTVVPPQGALGPKKSAPRVGTGNLGRSHGGFLDIEKPQIHFPDYPIDNSDTPFVAPYARDQCIDPGTHDSNTRKNS--SQNVETYLQELYKKNSNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKGLLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAK 544
            ++ C E+ + +   V+ S SL G +  E +   SS+ R+   +L + +L  ++ +    G  +S                  D +FD   E  ++AL+   VAL  V +I       QG L  + +  R  + NL + H     ++KPQ+ F D+PIDNSDTPF+ P A              RKN   S +V+ ++  L   N +     +HPYEN+I+ A +  +      ++  ++   + T  TFV  E D   ++E+L     IAVDLENHS RS+QGF CL+QISTR ED VIDA++LR  ++R L PIF++  +VKVLHGA+ DVQWLERDFG+Y VN+FDT  + +LL+L   SLAFLL  FCDV  ++KKKFQ +DWR RPLP++ ++YARSDTHYLLYI+DRLR  L +KG+L + W  S+TVS +R+ K R      + L  +  ++ D    R++ EL KWRDT AR EDES  +V   +++  I     +  +   + +     G+   ++ + A  + +++ D ++AK
Sbjct:   12 EEQCKELTRCIAGGVKQSNSLSGSESHEYLSSVSSEYRRSVRKLNKRVLKVLELLV---GSGVSGKQV--------------DEVFDSVVEYAEDALE---VALTNVEEIGRDG-EEQGELS-RSAQFRRPSANLAKHH-----LKKPQLDFDDWPIDNSDTPFI-PVAE-------------RKNPQLSDSVKQHVNRLSINNESVSL--KHPYENDILQAAKSSALLPVP-DRPRLWGSFEKTEFTFVEDEPDFEVMLEKLLGEKEIAVDLENHSERSYQGFCCLMQISTRSEDFVIDAIKLRSIMNRLL-PIFSNPKVVKVLHGANHDVQWLERDFGLYIVNLFDTFASTKLLELQG-SLAFLLEFFCDVKNSNKKKFQRSDWRVRPLPEDQMNYARSDTHYLLYIYDRLRSMLKEKGVLEECWLNSSTVSLRRYTKPRLPADAGRRLLDKSNMKGDWRTTRVVNELLKWRDTIARREDESPQFVLANELVLEIAGNAKRFASERQVQRLSQRVGS--EILSKEAASVAQIVSDTVEAK 505          
BLAST of Gcaud7270.t2 vs. uniprot
Match: M2XKN4_GALSU (Exosome complex exonuclease RRP6 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKN4_GALSU)

HSP 1 Score: 291 bits (744), Expect = 2.440e-84
Identity = 193/539 (35.81%), Postives = 291/539 (53.99%), Query Frame = 0
Query:   11 VLKGLEKAVRCSQSLPGRDDLELIRVTSSDLRKKGNQLAEHILSEIKSVASRYGVSISSXXXXXXXXXXTGSLSLRDALFDQTAETTDEALQHFNVALDRVRKISNTVVPPQGALGPKKSAPRVGTGNLGRSHGGFLDIEKPQIHFPDYPIDN--SDTPFVAPYARDQCIDPGTHDSNTRKNSSQNVETYLQELYKKNSNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKF-QLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKG-----LLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDAL 541
            VLK    AV C   LP +D+L+    T     +K  Q  +H+L          G  +S           T      + +F+ T E  +  L+  +  LD +R I  T    + +L  + S P   + +  R+     D+ KPQ  FPDYPI+N  +D   VA         P    +N   ++   ++++L +L++KN      +   Y  +++  L++ +      + V +Y P++ T CTFV +   L +++ +L+    IAVD+ENHS RSFQGF CL+Q STR+ED V+DA+ LRG + + L+ I  +  I+KVLHGAD DVQWL+RDFG+Y V+MFDTGQA+R LK P  SL++LL  +C++  +  KK+ QLADWR RPLP++M  YAR DTHYLLYI+DRL  +L +       LL   +  S  VS   + K +  P   + + +R  L FD+ Q   L  LC+WRD  AR EDES  YV P K +  I +   ++   E  L+   P  +IPPL+     ++ +L+ +++
Sbjct:    7 VLKPFRAAVNCFNQLPLKDELDFYEKTCQPYSEK-LQSVDHLLKTC------LGQIVSQNTNSQGFDTETDL----ETIFENTQEAVEFFLEQTDDCLDALRGIKKT--SEEDSL--QSSTPL--SSDERRTRWKQTDMPKPQKKFPDYPINNLLTDPNVVAT--------PSEFSTN-ESDAFSRLDSHLFKLHQKNRKHSSAKVSDYYQKLLKELKNNADSFQGSSTVTLYLPLEDTKCTFVNSLSSLEDMITKLEKEKEIAVDIENHSYRSFQGFICLLQFSTRQEDFVVDAIELRGHL-KMLSKILENGNILKVLHGADSDVQWLQRDFGLYIVHMFDTGQASRQLKFPFLSLSYLLKRYCNIDNSKTKKYYQLADWRIRPLPEDMFSYARQDTHYLLYIYDRLCEELRQSSNCNNNLLTCAYRASIQVSMLIYEKPQMNPLEYQSILSRRKLHFDEKQTLALRTLCRWRDEIARIEDESLVYVLPEKCMIEIAKRIPQS---ESELRGCCPY-SIPPLLKTYENEVLKLLQESI 514          
BLAST of Gcaud7270.t2 vs. uniprot
Match: Q4RVM3_TETNG ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RVM3_TETNG)

HSP 1 Score: 281 bits (718), Expect = 1.800e-82
Identity = 185/489 (37.83%), Postives = 268/489 (54.81%), Query Frame = 0
Query:   82 SLSLRDALFDQTAETTDEALQHFNVALDRVRKISNTVVP--PQGALGPK---KSAPRVGTGNLGRSHGGFL----DIEKPQIHFPDYPIDNSDTPFVAP-YARDQCIDP-----GTHDSNTRKNSSQNVETYL-----QELYKKNSNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQL-----SKKGLLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKL 545
            +L+ ++  FD   ++ D  L+   + LD    ++ T  P  P G   PK    S  R G+G+ GRS    L    ++ +PQ+ F +  +DNS+TPF+   + +   + P          +  K    +V   L     Q+  ++N    C   HPY+ E+ + +   S    S ++  +YKP+  T C+F+ T E+L  + E+L   S  AVDLE+HS RSF G TCL+QISTREED +ID L LR  ++  L   FTD  IVKV HGAD D++WL+RDFG+Y V +FDT QA+R L L   SL  LL+HFC+V  A  K++QLADWR RPLP+EM+ YAR+DTHYLLYI+D +R QL      + GLL   W+RS  +S K++ K  F       L  +    F+  Q+     L  WRD  AR+EDES  YV P  ++  I  + +  +  +G++    P   +PPL+ Q   +L  L+  A +  L
Sbjct:   73 TLTGQEDRFDLMVDSNDAILERVGILLDEADGVNRTQGPVMPAGFQPPKIVVSSWNRKGSGSGGRSEMFRLLHAKNVARPQLKFKEK-VDNSNTPFIPKIFIKPNAVKPLPSYFTNKQMHKEKPEDLDVPAALADFIHQQRTQENVVDMC--AHPYQYELDHLMIPESL--LSKSEPQLYKPVAETKCSFITTLEELAALNEKLCQLSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMY-ILNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNV--ASDKRYQLADWRIRPLPEEMVQYARADTHYLLYIYDCVRAQLLDFNHGQPGLLKSVWDRSRDISLKKYMKPIFTEESYLELQRKQKKSFNTQQLAAFRLLFAWRDKLARQEDESTGYVLPTHMMIKI--SEELPKEPQGIIACCNP---VPPLVRQQVNELHLLVQQAREMPL 548          
BLAST of Gcaud7270.t2 vs. uniprot
Match: A0A3P8V1B7_CYNSE (Exosome component 10 n=2 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8V1B7_CYNSE)

HSP 1 Score: 286 bits (733), Expect = 1.830e-81
Identity = 188/478 (39.33%), Postives = 263/478 (55.02%), Query Frame = 0
Query:   90 FDQTAETTDEALQHFNVALDRVRKISNTVVP--PQGALGPK---KSAPRVGTGNLGRSHGGFL----DIEKPQIHFPDYPIDNSDTPFVA-----PYARDQCIDPGTHDSNTRKNSSQNVETYLQEL-YKKNSNPDCDQR--HPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQL-----SKKGLLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKL 545
            +D   ++ D  L+   + LD    ++ +  P  P G   PK    S  R G+G+  RS    L    +I +PQ+ F +  IDNS+TPFV      P+A      P    S   +   Q+V + L +L +++ +    +    HPY+ E+ + +   S    S  +  +YKP+  T C+F+ T EDL  + E+L TSS  AVDLE+HS RSF G TCL+QISTREED +ID L LR  ++  L   FTD +IVKV HGAD D++WL+RDFG+Y V +FDT QA+R L L   SL  LL HFC V     K+FQLADWR RPLP+EM+ YARSDTHYLLYI+D +R QL      + GLL   W RS  +S K++ K  F       L  +    F+  Q+     L  WRD  AR+EDES  YV P  ++  I  + +  +  +G++    P   +PP++ Q   +L  L+  A +  L
Sbjct:  123 YDLVVDSNDVILERAGILLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGSGSGSRSETFRLMHAKNITRPQLKFKEK-IDNSNTPFVPKIFTKPHAMKPL--PSYFTSQQNRKDDQSVPSALADLIHQQRTQQHVEDMFAHPYQYELDHLMIPESL--LSKPEPQMYKPLAETTCSFIDTLEDLVALNEKLCTSSEFAVDLEHHSYRSFLGLTCLMQISTREEDFIIDTLELRSELY-ILNEAFTDPSIVKVFHGADSDMEWLQRDFGLYVVKLFDTHQASRALNLARHSLDHLLKHFCSVDS--DKRFQLADWRIRPLPEEMIQYARSDTHYLLYIYDCMRAQLLDFNYGQPGLLQSVWNRSRDISLKKYMKPIFTDESYLELQRKQKKSFNTQQLTAFRLLFAWRDKLARQEDESTGYVLPTHMMIKI--SEELPKEPQGIIACCNP---VPPVVRQQINELHLLVQQAREVPL 587          
BLAST of Gcaud7270.t2 vs. uniprot
Match: A0A2I1GTI1_9GLOM (HRDC domain-containing protein n=5 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1GTI1_9GLOM)

HSP 1 Score: 277 bits (709), Expect = 9.120e-81
Identity = 199/542 (36.72%), Postives = 282/542 (52.03%), Query Frame = 0
Query:   15 LEKAVRCSQSLPGRDDLELIRVTSSDLRKKGNQLAEHILSEIKSVASRYGVSISSXXXXXXXXXXTGSLSLRDALFDQTAETTDEALQHFNVALD----RVRKISNTVVPPQGALGPKKSAPRVGT-GNLGRSHGGFL---DIEKPQIHFPDYPIDNSDTPFVAPYA-RDQCIDPGTHDSNTRKNSSQNVETYLQELYKKNSNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKG--LLVKTWERSATVSRKRHRKVRFE-----PGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIV-RARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGD 539
            L  + + +  LP ++ +   R+  S   +K +QL+  IL +I  + S   +  S             S S             D  +   NV+LD    R +KIS TV          KS P +    N+      FL    I +PQ+ F D  +DNS  PF+     +   + P   + N R+N    +  Y                HPYE EI N +      E    + + Y P+  +   +V T EDL  + E+L+ ++ IA+DLE+H  RS+QGFTCL+QISTR++D ++DAL LR S+ + L   FT+  IVKV HGA+ D+ WL++DFG+Y VN+FDT  AA LL+LP  SLA+LL H+C+V     KK+QLADWR RP+P EML+YARSDTHYLLYI+DR+R +L  K   LL  T ERSA  S K ++K+ ++     PG    L A+    FD  Q  + + L  WRD  AREEDES  YV P ++L  +  +  D  + +    K G     +P L+  N  +L+ LI D
Sbjct:   29 LNISAKRNNELPSKE-VPFYRMIDSTAARKMDQLSGRILPKINQMISNADLPGSEGFCEITEAEDVDSWS------KDFVSLVDSLIDGVNVSLDEFSGRSKKISATV---------NKSKPVIAEISNVSSRDFRFLYGNAIGRPQLKFKDK-VDNSSAPFIPKLVEKPNALVPW--EINVRENKD--ILFYP---------------HPYEYEIKNIIYPAFMLEDK--EPIPYSPIMDSSHIWVETLEDLKAMCEKLENNNEIAIDLEHHDYRSYQGFTCLLQISTRDDDFIVDALALRNSL-QILNQYFTNPNIVKVFHGAEFDIIWLQKDFGVYIVNLFDTFHAATLLELPQKSLAYLLKHYCEVEA--DKKYQLADWRIRPIPSEMLYYARSDTHYLLYIYDRMRNELIAKSENLLRVTLERSAETSLKTYKKIVYDEDGEGPGGYMRLQAKWKTSFDYQQFAVFKALHAWRDRIAREEDESTGYVLPNEMLIAMSEKMPDDPKEISACFKTG-----VPSLVRMNILELSRLIKD 524          
BLAST of Gcaud7270.t2 vs. uniprot
Match: UPI0016045BEE (exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE)

HSP 1 Score: 280 bits (716), Expect = 1.180e-80
Identity = 171/414 (41.30%), Postives = 239/414 (57.73%), Query Frame = 0
Query:  148 DIEKPQIHFPDYPIDNSDTPFVAPYARDQCIDPGTH------DSNTRKNSSQNVETYLQELYKKNSNPDCDQ-----RHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKG-----LLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKL 545
            +IE+PQ+ F D  IDNS+TPF+ P  R +   P  H      D   R     +V   L +   +       Q      HPY+ E+ +     + ++    Q    KP+ +TP T V T E+L ++ ++L   S  AVDLE+HS RSFQGFTCL+Q+STR+ D ++D L LR  +H  L   FTD  +VKV HGAD D+QWL+RDFG+Y VNMFDTGQA+ +L LP  SLA+LL  +CDV     KK+QLADWR RPLP EM  YAR DTHYLL+I+D +R +L  +G     LL  T ERS  V  +R++K+ +      +L  +H   F+  Q+  +  + +WRDT AR+EDES  YV P  +L  +V A    + ++G+     P   +PPL+ Q+ + +  L+  A D  L
Sbjct:  168 NIERPQLKFKDK-IDNSNTPFI-PIIRHK---PNAHRPLPKYDQQKRHPEDLDVPAALADFIHRQREVHQGQPADLTAHPYQYELEHF--QPTPQQLLKKQPQPSKPIDATPLTLVTTLEELMDMNDKLTMCSEFAVDLEHHSYRSFQGFTCLMQVSTRDHDYIVDTLALRADLH-VLNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKTYCDVEP--DKKYQLADWRIRPLPSEMTQYAREDTHYLLHIYDCMRSELLDRGNNEANLLHNTLERSRQVCLQRYQKLLYTEDSYLNLLNKHKKTFNSQQLHAVRLVYRWRDTIARQEDESTGYVLPNHML--LVLAETLPKQIQGVFACCNP---VPPLVRQHIEDVHRLLVQARDVPL 566          
BLAST of Gcaud7270.t2 vs. uniprot
Match: H2U3V7_TAKRU (HRDC domain-containing protein n=1 Tax=Takifugu rubripes TaxID=31033 RepID=H2U3V7_TAKRU)

HSP 1 Score: 282 bits (721), Expect = 1.780e-80
Identity = 185/487 (37.99%), Postives = 270/487 (55.44%), Query Frame = 0
Query:   82 SLSLRDALFDQTAETTDEALQHFNVALDRVRKISNTVVP--PQGALGPK---KSAPRVGTGNLGRSHGGFL----DIEKPQIHFPDYPIDNSDTPFVAP-YARDQCIDP-GTHDSNTRKNSSQ----NVETYLQELYKKN---SNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQL-----SKKGLLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKL 545
            +L+ ++  FD   ++ D  L+   + LD    ++ T  P  P G   PK    S  R G+G+ GR     L    ++ +PQ+ F +  +DNS+TPF+   + +   + P  ++ +N + +  +    +V   L +L  +     N D    HPY+ E+ +     S    S  +  +YKP++ T C+F+ T EDL  + E+L   S  AVDLE+HS RSF G TCL+QISTREED +ID L +R  ++  L   FTD  IVKV HGAD D++WL+RDFG+Y V +FDT QA+R L L   SL  LL+HFC+V  A  K++QLADWR RPLP+EM+ YARSDTHYLLYI+DR+R QL      + GLL   W+RS  +S K++ K  F       L  +    F+  Q+     L  WRD  AR+EDES  Y  P  ++  I  + +  +  +G++    P   +PPL+ Q   +L  L+  A +  L
Sbjct:  103 NLTGQEDRFDLVVDSNDAILERVGILLDEADGVNRTRDPIMPAGFQPPKIVVSSWNRKGSGSGGRFEMFRLLHAKNVARPQLKFKEK-VDNSNTPFIPKIFIKPNAVKPLPSYFTNKQMHRERPEDLDVPAALADLIHQQRVQENVDDMFAHPYQYELDHLTIPESL--LSKPEPQLYKPVEETKCSFITTLEDLVALNEKLCQLSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLEVRSEMY-ILNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNV--ASDKRYQLADWRIRPLPEEMVQYARSDTHYLLYIYDRVRAQLLDFNHGQAGLLKSVWDRSRDISLKKYMKPIFTEESYLELQRKQKKSFNTQQLAAFRLLFAWRDKLARQEDESTGYALPTHMMIKI--SEELPKEPQGIIACCNP---VPPLVRQQVNELHLLVQQAREMPL 578          
BLAST of Gcaud7270.t2 vs. uniprot
Match: A7SSB3_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SSB3_NEMVE)

HSP 1 Score: 275 bits (702), Expect = 4.040e-80
Identity = 193/491 (39.31%), Postives = 258/491 (52.55%), Query Frame = 0
Query:   87 DALFDQTAETTDEALQHFNVALDRVRKISNT----VVPPQGALGPKKSAPRVGTGNLGRSHGGFL-----DIEKPQIHFPDYPIDNSDTPFVA-----PYARDQCIDPGTHDSNTRKNSSQNVET-----------YLQELYKKNSNPDCDQRHPYENEIVN----ALQDMSTKEFSINQVMVYKPMKSTPCTFVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIVIDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFDTGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHYARSDTHYLLYIFDRLRCQLSKKG-----LLVKTWERSATVSRKRHRKVRFEPGIAKHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDA 543
            D L++   E  D  L+  + +LD    +S      + P     GP  S+    T +     G F      +I++PQ+ F D  IDNS+TPF+      P A  + +D G   S  R    QN E            + Q +   + NP     HPYE E+      A Q    KE       +Y  ++ TP T V T E L ++ ++L  +   AVDLE+HS RSF GF CL+QISTR+ D ++D L LR  +H  L   FT+  I+KV HGAD DV WL+RDFGIY VNMFDTGQA+R+L L   SLAFLL  FC V+    K++QLADWR RPLP+EM+ YAR DTHYLLYI DRLR +L + G     LL+  + RS  V +K + K  F      +L  +     +  Q+R    L  WRDT AR EDES+ YV P  +LF I  A    R  +G+L    P   +P L+ Q   ++ +LI  + DA
Sbjct:   68 DDLYESLVEANDTLLEEVDTSLDEASGLSKNRKPILSPAVRQGGPMVSSWNRKTRDNNNKDGNFRLLLAKNIQRPQMKFKDK-IDNSNTPFIPIIKYKPNAL-KPLDQGLA-SRGRGQEVQNPEDLSVPSVIADFIHQQRVNSASENPVNRISHPYEFELQRFEPPATQLKEAKE------QLYDSLEDTPFTLVETVEQLESLSQKLMEAQEFAVDLEHHSYRSFLGFVCLMQISTRDHDFLVDTLELRNDLH-LLNESFTNPNILKVFHGADMDVGWLQRDFGIYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTA--DKQYQLADWRIRPLPEEMIRYAREDTHYLLYIHDRLRNELIRTGNENNNLLLSVYSRSTEVCQKHYEKPLFTSESYMNLYTKQRRPLNPVQLRAFRALYAWRDTIARREDESYGYVLPNHMLFTI--AETLPREPQGVLACCNP---VPTLVKQYVNEVHQLILQSRDA 541          
The following BLAST results are available for this feature:
BLAST of Gcaud7270.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHG1_9FLOR6.880e-28062.39Exosome component 10 n=1 Tax=Gracilariopsis chorda... [more]
R7Q3D8_CHOCR1.330e-18252.84Exosome component 10 Rrp6 n=1 Tax=Chondrus crispus... [more]
A0A7S2ZEH5_9RHOD9.570e-9437.64Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XKN4_GALSU2.440e-8435.81Exosome complex exonuclease RRP6 n=1 Tax=Galdieria... [more]
Q4RVM3_TETNG1.800e-8237.83(spotted green pufferfish) hypothetical protein (F... [more]
A0A3P8V1B7_CYNSE1.830e-8139.33Exosome component 10 n=2 Tax=Cynoglossus semilaevi... [more]
A0A2I1GTI1_9GLOM9.120e-8136.72HRDC domain-containing protein n=5 Tax=Rhizophagus... [more]
UPI0016045BEE1.180e-8041.30exosome component 10-like n=1 Tax=Branchiostoma fl... [more]
H2U3V7_TAKRU1.780e-8037.99HRDC domain-containing protein n=1 Tax=Takifugu ru... [more]
A7SSB3_NEMVE4.040e-8039.31Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 249..420
e-value: 1.4E-34
score: 130.9
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 251..419
e-value: 2.9E-41
score: 141.2
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 452..550
e-value: 4.6E-20
score: 73.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 147..451
e-value: 2.2E-89
score: 301.4
IPR002121HRDC domainPFAMPF00570HRDCcoord: 467..503
e-value: 8.0E-6
score: 25.7
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 45..561
NoneNo IPR availableCDDcd06147Rrp6p_like_exocoord: 245..423
e-value: 4.14529E-99
score: 300.669
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 45..561
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 197..446
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 455..545

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_513_length_23321_cov_4.687990contigNODE_513_length_23321_cov_4.687990:5948..8056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7270.t2Gcaud7270.t2Gracilaria caudata M_176_S67 malemRNANODE_513_length_23321_cov_4.687990 5948..8056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7270.t2 ID=Gcaud7270.t2|Name=Gcaud7270.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=703bp
MDESKQACVEVLKGLEKAVRCSQSLPGRDDLELIRVTSSDLRKKGNQLAE
HILSEIKSVASRYGVSISSSDSDSSSSQSTGSLSLRDALFDQTAETTDEA
LQHFNVALDRVRKISNTVVPPQGALGPKKSAPRVGTGNLGRSHGGFLDIE
KPQIHFPDYPIDNSDTPFVAPYARDQCIDPGTHDSNTRKNSSQNVETYLQ
ELYKKNSNPDCDQRHPYENEIVNALQDMSTKEFSINQVMVYKPMKSTPCT
FVATEEDLFNIVERLKTSSSIAVDLENHSVRSFQGFTCLIQISTREEDIV
IDALRLRGSIHRALAPIFTDETIVKVLHGADKDVQWLERDFGIYAVNMFD
TGQAARLLKLPSASLAFLLSHFCDVSGADKKKFQLADWRQRPLPKEMLHY
ARSDTHYLLYIFDRLRCQLSKKGLLVKTWERSATVSRKRHRKVRFEPGIA
KHLAARHALRFDKHQIRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIV
RARDKARTVEGLLKHGFPGGTIPPLIYQNAKKLTELIGDALDAKLDSATN
EKGGAEEHSNENSLQAEKGVKDKAISINLGKAVKGQDDCSVECASLSPDV
PNTDFSLSTSDALGFCDSKRKEITREKTAKSIADGLKLKVTRTSKSVLLD
FDSDSGTDGVDDEHFSHSQHATEQNIRVLCTGKRKWTPPGPCGLNPKRRN
TP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR044876HRDC_dom_sf
IPR036397RNaseH_sf
IPR002121HRDC_dom
IPR045092Rrp6-like
IPR012337RNaseH-like_sf
IPR010997HRDC-like_sf