Gcaud2078.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2078.t1 vs. uniprot
Match: A0A2V3IX46_9FLOR (Nucleoporin NUP53 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX46_9FLOR) HSP 1 Score: 438 bits (1126), Expect = 7.380e-153 Identity = 224/296 (75.68%), Postives = 248/296 (83.78%), Query Frame = 0
Query: 1 MFSSPTSKREDPPVRDRLPNYLLSANLTPNPEDQPSASFYTPSKPTAQRRLSSRTETPPIFAPRTPLTFNDRLRTDKPLEEQQRATRAFTPSSKPRTPHVPPNKSLLDTGPPSVRVLRSPSASPGTSLTPSSLSARTPTLGPQDRWITVFGFAPAMEAQALREFRRHGEIVRTIPGKGNWVHILYRAPLQAQVALQRPWRVLAGTETMVGAVPCTEPNVAKLADEQIEKGMLIASPGAAHVSPFSNTLPLPSASPINPLKTPSTMLRRDNHASTTPTIIRTPQRQSGIFDFLSGLY 296
MF SP++ R+D +RLPNYLLS++ TP + S F TP+K T QRRLS+R E P +FA RTPLTFNDRLR D+P ++ A+R F PS+KPRTPHVPPNKSLLDTGPPSVRVLRSPSASP TSLTP+SLSARTPTLGPQDRWITVFGF PAMEAQALREFRRHGEIVRT+PGKGNWVHILYR PLQAQVALQRPWR+LAGTETMVGA+PCTEPNVAKLADEQIEKGMLIASP A +PF P PSA+PIN LKTPSTMLRR+ + PT+IRTPQRQSGIFDF SG Y
Sbjct: 1 MFPSPSNARDDDHTTERLPNYLLSSSATPALDQPSSHLFQTPAKYTPQRRLSTRPEAPQLFARRTPLTFNDRLRPDRP-DDHSTASRTFMPSTKPRTPHVPPNKSLLDTGPPSVRVLRSPSASPATSLTPNSLSARTPTLGPQDRWITVFGFGPAMEAQALREFRRHGEIVRTMPGKGNWVHILYRTPLQAQVALQRPWRILAGTETMVGAMPCTEPNVAKLADEQIEKGMLIASPSVATSAPFGTPAPPPSATPINSLKTPSTMLRREPATVSEPTVIRTPQRQSGIFDFFSGFY 295
BLAST of Gcaud2078.t1 vs. uniprot
Match: M2Y900_GALSU (RRM Nup35-type domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y900_GALSU) HSP 1 Score: 99.0 bits (245), Expect = 1.570e-20 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0
Query: 138 PTLGPQDR----WITVFGFAPAMEAQALREFRRHGEIVRTIPGKGNWVHILYRAPLQAQVALQRPWRVLAGTETMVGAVPCTEPNVAKLADEQI----EKGMLIASPGAAHVSPFSNTL 248
P+L P+ W+TVFGF P+++A LREFR +GEIVR IPGKGNW+HI YR LQAQ+A + ++A T TMVGA+PC+E + L +E I +KG + + ++S F N +
Sbjct: 143 PSLSPRSEGTSCWVTVFGFGPSLQAAVLREFRNYGEIVRYIPGKGNWMHICYRTLLQAQMATGKRIHMVAAT-TMVGAIPCSEQEI--LREESISTPADKGSVSKT---RYISNFGNNI 255
BLAST of Gcaud2078.t1 vs. uniprot
Match: A0A7S0G7K2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G7K2_9RHOD) HSP 1 Score: 95.9 bits (237), Expect = 4.690e-19 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 0
Query: 119 SPSASPGTS--------LTPSSLSARTPTLGPQDRWITVFGFAPAMEAQALREFRRHGEIVRTIPGKGNWVHILYRAPLQAQVALQRPWRVLAGTETMVGAV 212
SP+ S GT+ LT + S TP DRW+TVFGF +M++ LREFR HGEI R + GKGNW+HILYR LQAQVAL R R++ G ET+VG +
Sbjct: 172 SPATSRGTTSANRTRFNLTSPTASMGTPDPETADRWVTVFGFGQSMQSLILREFRNHGEIDRHVSGKGNWMHILYRTALQAQVALSRRVRLIGG-ETLVGVI 272
BLAST of Gcaud2078.t1 vs. uniprot
Match: A0A7J7IF51_9RHOD (Nucleoporin n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IF51_9RHOD) HSP 1 Score: 85.9 bits (211), Expect = 1.750e-15 Identity = 55/135 (40.74%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 101 PPNKSLLDT-----------GPPSVRVLR-----SPSASPGTSLTPSSLSARTPTLGPQDRWITVFGFAPAMEAQALREFRRHGEIVRTIPGKGNWVHILYRAPLQAQVALQRPWRVLAGTETMVGAVPCTEPNV 219
PPN+S +DT G P + R +P ASP +S T S L G RW+TVFGFAP ++Q LRE R G+++ KGNW+H+ + +PLQAQ A R R L M+G VPCTEP +
Sbjct: 141 PPNESWMDTAHAAGRHRAETGTPMSNMARGLFTPAPPASPDSSRT-SPLQE-----GELSRWVTVFGFAPGQQSQVLRELRSFGQVLEHRLRKGNWMHVRFESPLQAQAACSRSSR-LVNDAMMIGIVPCTEPEL 268
BLAST of Gcaud2078.t1 vs. uniprot
Match: M1UT25_CYAM1 (RRM Nup35-type domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UT25_CYAM1) HSP 1 Score: 85.9 bits (211), Expect = 1.780e-15 Identity = 54/139 (38.85%), Postives = 70/139 (50.36%), Query Frame = 0
Query: 91 PSSKPRTPHVPPNKSLLDTGPPSVRVLRSPSASPGTSLTPSSLSARTPTLGPQDR-----------WITVFGFAPAMEAQALREFRRHGEIVRTIPGKGNWVHILYRAPLQAQVALQRPWRVLAGTETMVGAVPCTEPN 218
PS + PPN S LDT P L + + + G +L + T DR W+TVFGFAP ++Q LRE R G ++ KGNW+H+ Y +PLQAQ A R R+L TM+G VPCTEP
Sbjct: 132 PSVRSAGGRAPPNTSWLDTETPVSSRLGAGAETTGPALARGLFTPGLRTTLDADRSSPLQESELACWVTVFGFAPGQQSQVLRELRSFGPVLEHRLRKGNWMHVRYESPLQAQAACSRSSRLLNDV-TMIGIVPCTEPE 269
BLAST of Gcaud2078.t1 vs. uniprot
Match: A0A7S1XBP0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBP0_9RHOD) HSP 1 Score: 70.1 bits (170), Expect = 4.270e-10 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query: 146 WITVFGFAPAMEAQALREFRRHGEIVRTIPGKGNWVHIL 184
WITVFGF AM++ LREFR HGEIVR IPGKGNW+HIL
Sbjct: 266 WITVFGFGSAMQSVVLREFRAHGEIVRHIPGKGNWIHIL 304
BLAST of Gcaud2078.t1 vs. uniprot
Match: UPI000C20E35C (nucleoporin NUP53 n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20E35C) HSP 1 Score: 60.1 bits (144), Expect = 9.440e-7 Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 0
Query: 146 WITVFGFAPAMEAQALREFRRHGEIV-RTIPGKGNWVHILYRAPLQAQVALQRPWRVLAGTETMVGAVPCTEPNVAKLADEQIEKGMLIASPGAAHVSPFSNTLPLPSASPINPLKTP 262
W+TVFGF P+ + L + +G IV + P +GNW+H+ Y +PL+A AL ++++ + M+G VP N ++ E +E +++P A S P PS SP+ P P
Sbjct: 170 WVTVFGFPPSATSLVLAQLANYGSIVDKKFPTQGNWIHLKYSSPLEANKALALHGKLISNS-IMIGVVPFVNKNKSEN-KENMEND--VSTPVRARSLRQSYITPQPS-SPVVPQNVP 282 The following BLAST results are available for this feature:
BLAST of Gcaud2078.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2078.t1 ID=Gcaud2078.t1|Name=Gcaud2078.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=298bpback to top |