Gcaud2075.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2075.t1
Unique NameGcaud2075.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length125
Homology
BLAST of Gcaud2075.t1 vs. uniprot
Match: A0A2V3J847_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J847_9FLOR)

HSP 1 Score: 87.8 bits (216), Expect = 8.240e-18
Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 0
Query:    1 MENMGQNLSLDLLGL-YSCPQPGVDELLRWEVRGFYDEKFDDPWNFNLNENMVSLITATAISFSIVLFVDILFRVL---KDQDILLGTIRRPWDSEKVSNTVTV 100
            ME + +N S  L    + C +PG+DE  +W VRGFY+ KF+DP NFNL+EN VSLITA A SFS+VLF DI+FR L   K  ++    I R    E  SN +T+
Sbjct:    1 MEQLIRNTSSQLNSTDFFCSRPGLDEASQWSVRGFYENKFNDPLNFNLSENSVSLITAIATSFSLVLFNDIVFRALVRAKINEVNKHVILRRHVLETFSNPLTL 104          
BLAST of Gcaud2075.t1 vs. uniprot
Match: A0A2V3J1Z3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z3_9FLOR)

HSP 1 Score: 79.0 bits (193), Expect = 1.140e-14
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    2 ENMGQNLSLDLLGLYSCPQPGVDELLRWEVRGFYDEKFDDPWNFNLNENMVSLITATAISFSIVLFVDILFRV 74
            E + +N S   +  + C Q G+DE   W++ GFY++KF+DP NFNL+EN VSLITA   +FS++LF DI++R+
Sbjct:    3 EQLKRNSSPAWMKTFHCSQKGLDEDSEWDLHGFYEDKFNDPSNFNLSENAVSLITALLTAFSLILFTDIMYRI 75          
BLAST of Gcaud2075.t1 vs. uniprot
Match: A0A2V3ICE5_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICE5_9FLOR)

HSP 1 Score: 76.3 bits (186), Expect = 9.900e-14
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   15 LYSCPQPGVDELLRWEVRGFYDEKFDDPWNFNLNENMVSLITATAISFSIVLFVDILFRV---LKDQDILLGTIRRPWDSEKVSNTVTV 100
            L  CP    +    W+VRGFYD+KF+DP NFNL EN VS++TA   SFS++LFVDI+FRV    K+ ++    + R    +  SN +T+
Sbjct:    3 LSMCPGNRSNAADLWDVRGFYDDKFNDPMNFNLGENTVSILTAITTSFSLLLFVDIIFRVSVRAKNGEVSKRVVLRRHIVDNCSNPITL 91          
BLAST of Gcaud2075.t1 vs. uniprot
Match: A0A2V3IRV0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRV0_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 1.900e-13
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 MENMGQNLSLDLLGLYSCPQPGVDELLRWEVRGFYDEKFDDPWNFNLNENMVSLITATAISFSIVLFVDILFRV 74
            M    +N S   +  Y+C + G+    +W++ GFY++KF+DP N NL+EN VSL+TA + SFS++LF DI+FR+
Sbjct:   10 MIRQTRNPSPAWMATYNCSRKGLGHYSKWDLHGFYEDKFNDPLNLNLSENAVSLLTALSCSFSLILFTDIVFRI 83          
The following BLAST results are available for this feature:
BLAST of Gcaud2075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J847_9FLOR8.240e-1849.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z3_9FLOR1.140e-1447.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICE5_9FLOR9.900e-1444.94Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IRV0_9FLOR1.900e-1344.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_503_length_23508_cov_5.792160contigNODE_503_length_23508_cov_5.792160:5269..5744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2075.t1Gcaud2075.t1Gracilaria caudata M_176_S67 malemRNANODE_503_length_23508_cov_5.792160 5269..5744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2075.t1 ID=Gcaud2075.t1|Name=Gcaud2075.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=125bp
MENMGQNLSLDLLGLYSCPQPGVDELLRWEVRGFYDEKFDDPWNFNLNEN
MVSLITATAISFSIVLFVDILFRVLKDQDILLGTIRRPWDSEKVSNTVTV
DDWKLGFDGEFGCTDRVLVHIPRN*
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