Gcaud8488.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8488.t1
Unique NameGcaud8488.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length362
Homology
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BLAST of Gcaud8488.t1 vs. uniprot
Match: A0A2V3IR74_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR74_9FLOR)

HSP 1 Score: 414 bits (1063), Expect = 7.090e-142
Identity = 195/271 (71.96%), Postives = 230/271 (84.87%), Query Frame = 0 
Query:   36 VLEVPDNTTEYEGVPLGAIVTIVETEVPLRDSIEAAQRAMPACTGIFISPTQILSSAHCAYHHRQEEGEEPFWMYGDDNPQNTFLYAIAGKVNAVDRTFDVYNLVQGCIPQSYVDAENEEVTSVMGNDLVVFEIEGRFAGDSQSVGTIASSVVYDVPHDYMLPQYPSDVNDGRSLVIDKNTTPILFEPLGSGVFFSIELASWSGSSGGPIIDMNATRINGTPTVVGVLMSSGWEVCDSGIVTVTTGIPVVQGLI--ASTSNARNGREKGQG 304
            +L VPD+ T YEGVPLG +VTIVETEVPL +SI AAQRA+PACTG+F+SPTQI+SSAHC +H +Q+E EEP+WM+GD N  NTFLYAIAGKV+A D +FDVY LV GC+PQSYVDAE+E+ TS MGNDLVVFE+EG F GD  S+G IA+S+VYD+P +Y+LPQYPSDV++GRSLVID NTTPI+FEPLG GVFFSI+LASWSGSSGGPIID+NATR +G P VVGVLMSSGW VCDSGIV VTT IP+VQ L+  AS +  RNG   G+G
Sbjct:    1 MLNVPDSATHYEGVPLGGVVTIVETEVPLHESIAAAQRALPACTGMFVSPTQIISSAHCVFHRKQDESEEPYWMFGDGNLHNTFLYAIAGKVDAEDNSFDVYKLVTGCVPQSYVDAESEDATSSMGNDLVVFEVEGNFTGDLSSIGNIANSIVYDIPRNYLLPQYPSDVDEGRSLVIDMNTTPIVFEPLGDGVFFSIDLASWSGSSGGPIIDVNATRSSGRPCVVGVLMSSGWSVCDSGIVPVTTAIPLVQELLTTASIAQKRNGNHSGKG 271
The following BLAST results are available for this feature:
BLAST of Gcaud8488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR74_9FLOR7.090e-14271.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 182..251
e-value: 1.3E-7
score: 33.8
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 73..181
e-value: 1.3E-7
score: 33.8
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 73..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1141_length_13362_cov_4.300354contigNODE_1141_length_13362_cov_4.300354:10435..11638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8488.t1Gcaud8488.t1Gracilaria caudata M_176_S67 malemRNANODE_1141_length_13362_cov_4.300354 10435..11638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8488.t1 ID=Gcaud8488.t1|Name=Gcaud8488.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=362bp
MVISLDLHQNNLRRRQGPRSAFLQRSIVQCESTVEVLEVPDNTTEYEGVP
LGAIVTIVETEVPLRDSIEAAQRAMPACTGIFISPTQILSSAHCAYHHRQ
EEGEEPFWMYGDDNPQNTFLYAIAGKVNAVDRTFDVYNLVQGCIPQSYVD
AENEEVTSVMGNDLVVFEIEGRFAGDSQSVGTIASSVVYDVPHDYMLPQY
PSDVNDGRSLVIDKNTTPILFEPLGSGVFFSIELASWSGSSGGPIIDMNA
TRINGTPTVVGVLMSSGWEVCDSGIVTVTTGIPVVQGLIASTSNARNGRE
KGQGNESVSVNSKTPLVEQLAGPIAPVEASTEPLELLTFHSTQESDEYDV
IPMVSGDEQMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043504Peptidase_S1_PA_chymotrypsin
IPR009003Peptidase_S1_PA