Gcaud7675.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7675.t1
Unique Name	Gcaud7675.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	157

Homology

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A2V3IK71_9FLOR (Thiosulfate sulfurtransferase 16, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK71_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 5.760e-47
Identity = 73/109 (66.97%), Postives = 91/109 (83.49%), Query Frame = 0

Query:   48 LSPQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSLTTPDMKPLPSFVEDFRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIEK 156
            LSP+ V+++MT +S +YVDVRTP EFA GHIP A+NV LTTPDMKPLPSFV+DFR AVGDA+ +IVGCKSGKRS  AIT+L++AG + L+ELEGG+ +W  DS LP+ K
Sbjct:   19 LSPREVHDRMTNSSAIYVDVRTPTEFAEGHIPDAINVPLTTPDMKPLPSFVDDFRAAVGDASDIIVGCKSGKRSSNAITQLHQAGFKQLLELEGGFSSWLEDSNLPVAK 127

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BLAST of Gcaud7675.t1 vs. uniprot
Match: R7QPY2_CHOCR (Rhodanese domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPY2_CHOCR)

HSP 1 Score: 89.4 bits (220), Expect = 3.380e-18
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 0

Query:   38 HRAAHTMATQLSPQAVNEKMT-QTSTVYVDVRTPAEFAAGHIPRALNVSLTTPDMKPLPSFVEDFRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPI 154
            HRA   M +  SP A  E++  Q    Y+DVRTP EF AGH P A+NV +T    KP+ +FV++          ++VGCK+G RS MAI  L +AG + L  +EGGY+ W + S LP+
Sbjct:  236 HRAPSAMFSSASPAAAFERLQEQYPPQYLDVRTPPEFQAGHPPGAVNVPVTLDFTKPVDTFVQNVADLFPKDADLLVGCKTGARSMMAIGLLEKAGFEKLTNVEGGYNAWNAAS-LPL 352

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A2J7ZSM1_9CHLO (Thiosulfate sulfurtransferase 16, chloroplastic n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZSM1_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 8.690e-18
Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 0

Query:   19 SSLFSSPSRPALC---RRAVVLHRAAHTMATQLSPQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSLTTPDMKPLPSFVEDFRTAVGD-ATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIE 155
            +S   + +RPAL    RR + + RA    ++ + P    E +      Y+DVRTPAEF+AGH P A+NV +  PD      FV   + A  D A  ++VGCK+G+RS  AI  L++AG   L+ L GG+D WA+   LP+E
Sbjct:    8 ASALHARARPALLPSGRRPLHVTRAT---SSTVMPAEAQELIKAEGYKYLDVRTPAEFSAGHAPAAVNVDVFDPD------FVAGVQRAFPDKAESLLVGCKAGRRSLTAIGLLSQAGYTDLVNLTGGFDLWAAQG-LPLE 138

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BLAST of Gcaud7675.t1 vs. uniprot
Match: D8U237_VOLCA (Rhodanese domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U237_VOLCA)

HSP 1 Score: 83.6 bits (205), Expect = 1.780e-17
Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 0

Query:   33 RAVVLHRAAH-TMATQLS---PQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVS---LTTPDMKPLPSFVEDFRTAVGDATQ-VIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIEK 156
            RAV   R  H T A Q     P   N+ + +    Y+DVRT  EF+AGH P A+NV    L +  M P P+F+ D +       + ++VGCKSG+RS MAI  +++AG   L+ + GG+D WA+   LP+E+
Sbjct:   24 RAVGAGRTIHVTRAAQYKDAMPAEANQLLKEEGYNYLDVRTAEEFSAGHAPSAVNVPVVFLGSGGMSPNPAFLSDVQRVFPKKDEALVVGCKSGRRSLMAIDAMSQAGYSNLVNVVGGFDLWAAQG-LPVER 154

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A6A3A9W1_HIBSY (Rhodanese-like domain-containing protein 15 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A9W1_HIBSY)

HSP 1 Score: 83.6 bits (205), Expect = 3.260e-17
Identity = 53/144 (36.81%), Postives = 71/144 (49.31%), Query Frame = 0

Query:   21 LFSSPSRPALCRRAVVLHRAAH------------TMATQLSPQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSLTT---PDMKPLPSFVEDFRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASD 149
            LFS P  P  CR AVV  R +             T A    P  V  ++ Q    Y+DVRTP EF+AGH+P A+N+         M   PSF+ +     G   ++IVGC+ GKRS MA T L  AG   + ++ GGY+ W  +
Sbjct:   32 LFSVPVNPQTCRIAVVRKRMSFRTKATLGGNMQVTEAPTSVPVRVAYELHQAGHRYLDVRTPEEFSAGHVPGAINIPYFCRLGSGMAKNPSFLAEVSAHFGQFDEIIVGCQLGKRSLMAATDLLAAGFTAVTDIAGGYEVWTQN 175

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A0D2SS11_GOSRA (Rhodanese domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A0D2SS11_GOSRA)

HSP 1 Score: 84.3 bits (207), Expect = 6.690e-17
Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 0

Query:   31 CRRAVVLHRAAHTMATQLSPQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSL---TTPDMKPLPSFVEDFRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIE 155
            C +AV+      T      P  V  ++ Q    Y+DVRTP EF+AGH+P A+N+       P M   PSFV +  + +G   ++IVGC+ GKRS MA T+L  AG   + ++ GGY  W  +  LP E
Sbjct:  126 CTKAVLGGNVHVTGVPTSVPVRVAHELHQAGHRYLDVRTPEEFSAGHVPGAINIPYMYKVGPGMAKNPSFVAEVSSHLGKYDEIIVGCQLGKRSLMAATELLAAGFTAVTDIAGGYAAWTQNG-LPTE 252

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A5J5NVF9_GOSBA (Rhodanese domain-containing protein n=6 Tax=Gossypium TaxID=3633 RepID=A0A5J5NVF9_GOSBA)

HSP 1 Score: 84.3 bits (207), Expect = 7.480e-17
Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 0

Query:   31 CRRAVVLHRAAHTMATQLSPQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSL---TTPDMKPLPSFVEDFRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIE 155
            C +AV+      T      P  V  ++ Q    Y+DVRTP EF+AGH+P A+N+       P M   PSFV +  + +G   ++IVGC+ GKRS MA T+L  AG   + ++ GGY  W  +  LP E
Sbjct:  133 CTKAVLGGNVHVTGVPTSVPVRVAHELHQAGHRYLDVRTPEEFSAGHVPGAINIPYMYKVGPGMAKNPSFVAEVSSHLGKYDEIIVGCQLGKRSLMAATELLAAGFTAVTDIAGGYAAWTQNG-LPTE 259

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A835WJN2_9CHLO (Rhodanese domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WJN2_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 8.360e-17
Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 0

Query:   24 SPSRPALCRRAVV---LHRAAHTMATQLSPQAVNEK----MTQTSTVYVDVRTPAEFAAGHIPRALNVSLTT---PDMKPLPSFVEDFRTAVGDATQ-VIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPI 154
            S +RPA   RAV    LH +  +M     PQ V  K    + Q    Y+DVRT  E+AAGH P ++NV +       M P P F++    A  D  + ++VGCKSG+RS MAI  L++AG   L+ L GG+D WA    LP+
Sbjct:    5 SIARPATFGRAVAARRLHVSCPSMRQVPIPQDVMPKQAQELLQEDYKYLDVRTTEEYAAGHAPASVNVPVVNFGPAGMVPNPGFLQAVEAAFPDKQERLVVGCKSGRRSMMAIDLLSQAGYCELVNLAGGFDLWAGQG-LPV 145

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A150GCK1_GONPE (Rhodanese domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GCK1_GONPE)

HSP 1 Score: 80.9 bits (198), Expect = 1.700e-16
Identity = 52/135 (38.52%), Postives = 71/135 (52.59%), Query Frame = 0

Query:   26 SRPALCRRAVVLHRAAHTMATQLSPQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVS---LTTPDMKPLPSFVEDFRTAVGD-ATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIEK 156
            SR     R + +H+ A        PQ   + +      Y+DVRT  EFAAGH P ++NV    L +  M P P+F+ +        A  ++VGCKSG+RS MAI  L +AG   L+ L GG+D WA    LP+EK
Sbjct:   22 SRSISASRVMAVHKDA-------LPQEAQQLLKGEGYKYLDVRTTEEFAAGHAPSSVNVPVVFLGSGGMSPNPAFLAEVEKLFPSRAESLVVGCKSGRRSLMAIDVLAQAGYVDLVNLTGGFDLWAGQG-LPVEK 148

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BLAST of Gcaud7675.t1 vs. uniprot
Match: A0A6A2Y5P5_HIBSY (Rhodanese-like domain-containing protein 15 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Y5P5_HIBSY)

HSP 1 Score: 80.9 bits (198), Expect = 3.710e-16
Identity = 53/150 (35.33%), Postives = 71/150 (47.33%), Query Frame = 0

Query:   21 LFSSPSRPALCRRAVVLHRAAHTMATQLS------------PQAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSLTTP---DMKPLPSFVEDFRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDSTLPIE 155
            LFS P  P  CR AVV  + +      L             P  V  ++ Q    Y+DVRTP EF+AGH+P A+N+         M    SF+ +     G   ++IVGC+ GKRS MA T L  AG   + ++ GGY  W  +  LP E
Sbjct:   34 LFSVPVNPQTCRIAVVHEKFSFCTKANLRGNVQVTGVPTSVPVRVAHELYQAGHRYLDVRTPEEFSAGHVPGAINIPYMYKLGSGMAKNHSFLAEVSAHFGQYDEIIVGCQLGKRSLMAATDLQAAGFTAVTDIAGGYAAWTQNG-LPTE 182

The following BLAST results are available for this feature:

BLAST of Gcaud7675.t1 vs. uniprot

BLAST of Gcaud7675.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IK71_9FLOR	5.760e-47	66.97	Thiosulfate sulfurtransferase 16, chloroplastic n=...	[more]
R7QPY2_CHOCR	3.380e-18	43.22	Rhodanese domain-containing protein n=1 Tax=Chondr...	[more]
A0A2J7ZSM1_9CHLO	8.690e-18	39.72	Thiosulfate sulfurtransferase 16, chloroplastic n=...	[more]
D8U237_VOLCA	1.780e-17	39.39	Rhodanese domain-containing protein n=1 Tax=Volvox...	[more]
A0A6A3A9W1_HIBSY	3.260e-17	36.81	Rhodanese-like domain-containing protein 15 n=1 Ta...	[more]
A0A0D2SS11_GOSRA	6.690e-17	38.28	Rhodanese domain-containing protein n=3 Tax=Gossyp...	[more]
A0A5J5NVF9_GOSBA	7.480e-17	38.28	Rhodanese domain-containing protein n=6 Tax=Gossyp...	[more]
A0A835WJN2_9CHLO	8.360e-17	40.14	Rhodanese domain-containing protein n=3 Tax=Chlamy...	[more]
A0A150GCK1_GONPE	1.700e-16	38.52	Rhodanese domain-containing protein n=1 Tax=Gonium...	[more]
A0A6A2Y5P5_HIBSY	3.710e-16	35.33	Rhodanese-like domain-containing protein 15 n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 48..152 e-value: 1.6E-13 score: 61.0
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 50..148 e-value: 2.5E-15 score: 56.9
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 62..155 score: 15.626837
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 33..154 e-value: 9.3E-27 score: 95.4
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 41..155
None	No IPR available	PANTHER	PTHR45431:SF3	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC	coord: 32..154
None	No IPR available	PANTHER	PTHR45431	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC	coord: 32..154
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 12..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..156
None	No IPR available	CDD	cd00158	RHOD	coord: 53..147 e-value: 2.70131E-20 score: 78.1102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_500_length_23599_cov_4.429981	contig	NODE_500_length_23599_cov_4.429981:12756..13226 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7675.t1	Gcaud7675.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_500_length_23599_cov_4.429981 12756..13226 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7675.t1 ID=Gcaud7675.t1|Name=Gcaud7675.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=157bp
MVAPLLRASARSSFIVLPSSLFSSPSRPALCRRAVVLHRAAHTMATQLSP
QAVNEKMTQTSTVYVDVRTPAEFAAGHIPRALNVSLTTPDMKPLPSFVED
FRTAVGDATQVIVGCKSGKRSYMAITKLNEAGVQGLMELEGGYDNWASDS
TLPIEK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001763	Rhodanese-like_dom
IPR036873	Rhodanese-like_dom_sf