Gcaud7560.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7560.t1
Unique NameGcaud7560.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length80
Homology
[Close]
BLAST of Gcaud7560.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR)

HSP 1 Score: 62.8 bits (151), Expect = 1.080e-9
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:    1 MTALLVQESIQTRFQSASDLQHCKIDPSEMCIIRGGALETYWNKSIAIGDSSHNLSEP 58
            MTA LVQE++   FQS  D Q C+I P+E+C+  GGALE +WN SIAI +  H   +P
Sbjct:  274 MTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIAI-EVCHKQRQP 330
[Close]
BLAST of Gcaud7560.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR)

HSP 1 Score: 61.6 bits (148), Expect = 2.740e-9
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0 
Query:    1 MTALLVQESIQTRFQSASDLQHCKIDPSEMCIIRGGALETYWNKSIAIGDSSHNLSEPPQRLAKW 65
            MTA LVQE I + ++S  D + CKI PS++C +RGGALE +WN +IA  +  HN   P Q L+ +
Sbjct:  233 MTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSNC-HN-GNPIQYLSTY 295
The following BLAST results are available for this feature:
BLAST of Gcaud7560.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IME4_9FLOR1.080e-951.72Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IMD5_9FLOR2.740e-947.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1140_length_13378_cov_4.309701contigNODE_1140_length_13378_cov_4.309701:1704..5322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7560.t1Gcaud7560.t1Gracilaria caudata M_176_S67 malemRNANODE_1140_length_13378_cov_4.309701 1704..5322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7560.t1 ID=Gcaud7560.t1|Name=Gcaud7560.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=80bp
MTALLVQESIQTRFQSASDLQHCKIDPSEMCIIRGGALETYWNKSIAIGD
SSHNLSEPPQRLAKWTGRQYIDEDVDALR*
back to top