Gcaud1681.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1681.t1
Unique NameGcaud1681.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length261
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_494_length_23790_cov_4.579307contigNODE_494_length_23790_cov_4.579307:21497..22279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1681.t1Gcaud1681.t1Gracilaria caudata M_176_S67 malemRNANODE_494_length_23790_cov_4.579307 21497..22279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1681.t1 ID=Gcaud1681.t1|Name=Gcaud1681.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=261bp
MTRSITILLLVTLLSVTFAAPHPLSRQNSASSGTQTAGSGASGNNAVAVS
ADTQSGSAGAAGEDNAAGVAGPGFAAGVANKNPSPTPTPSRTPTPTPSVS
ASPSASPSVTPSASATPSITPSPSVSSSVTPSPSVSSSVTPSPSVSSSIS
PTPSVSPSPSASVSPTPSTPASPSDTEEEDSEPGTVLVGLPDGSGAAATG
DNAVGAVANADSGAAGAAGENAAGAFAGPGQAGGFAFGNVQFPFNFGPFG
NIFGAPSPVA*
back to top