Gcaud2348.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2348.t1
Unique NameGcaud2348.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length423
Homology
BLAST of Gcaud2348.t1 vs. uniprot
Match: A0A2V3J048_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J048_9FLOR)

HSP 1 Score: 522 bits (1344), Expect = 2.440e-180
Identity = 250/419 (59.67%), Postives = 313/419 (74.70%), Query Frame = 0
Query:    1 MMSSDGIGHSMCAVNLEFNLALNMNLTYTHRVGFYSSLSRYDRMAVEEFFGWGVGEVPRTKIQTDGCSPEGGKWPEEHNLLDCHLCDKPLENGSLKIERIVEVPSTLLNSNCPT-QTWCRKELQIFLQENSLSNTIFQLPSSICSPLKTDANFLSTRNLFYNKYWNKHGRLPWKHTRDRYKGYNRYQKRVLPLSPRELNIAVHIRRGDFLETKSSRKITKDKVFATIISRVLTVIGNVGGSLAAMPVAIHIYSEGQLKKTNVFSTHTVELQDKEYYDHDGQPREESWWTSLITT---TLRDDRYSSCAWEGRFRVKFHISEDTLLSLHNMNVADVFIGSHSGMSTHLVWSISRGVNLLPQPSSVDIEIGKKGYLCCSIPFKNDDGHFSLSTFRWYWEAYAYANEESAWHSLHVNNENES 415
            +M+SDGIGHSM A+N+E+NLALN+NLTYTHRVGFYSSLSR DR AVE+FFGWGVGEV R K+Q  GCSP+GG+WP+E ++  CH+CDKPL NGS+ I++++++P   L++ C   +  C K+L  F+Q NSLS++IFQLP   CSP  TDANFL T+ +F+NKYW KHG+LPW  T D Y   N   +R + L+PRELNIA+H RRGDFL+ +  R +T D  FA ++  VL VI N G   + MPVA+H+YSEG+L K    STH+VELQDK YYD++G  R E WW SLI +   TL++   S   WE + RVKFHISEDTL SLHNM  ADVFIGSHSG+STHLV S+SRGVNLLP  S +D EIGKKGY+CCS+PF ND+G FSLSTF WYW AY  AN +SAW+S   + + +S
Sbjct:  114 LMTSDGIGHSMGAINMEYNLALNLNLTYTHRVGFYSSLSRGDRFAVEDFFGWGVGEVRRKKVQEQGCSPKGGRWPDEEDMYACHVCDKPLHNGSMNIKKVLDIPDVFLDAGCQNPEALCWKKLYEFMQNNSLSHSIFQLPEKTCSPPNTDANFLKTKEIFFNKYWKKHGQLPWMAT-DGYTESN--TQRRITLNPRELNIAIHSRRGDFLKPEIGRTLTNDTTFAAVLHEVLRVIQNTGTVFSFMPVAVHVYSEGKLLKEKALSTHSVELQDKNYYDNEGLARNEKWWKSLILSRLRTLKNHGPSKVRWEEKLRVKFHISEDTLSSLHNMIAADVFIGSHSGLSTHLVRSMSRGVNLLPHSSGIDTEIGKKGYICCSVPFNNDNGVFSLSTFEWYWRAYVSANVDSAWYSFKGHGDTQS 529          
BLAST of Gcaud2348.t1 vs. uniprot
Match: R7QBV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBV6_CHOCR)

HSP 1 Score: 410 bits (1054), Expect = 6.340e-136
Identity = 207/404 (51.24%), Postives = 274/404 (67.82%), Query Frame = 0
Query:    3 SSDGIGHSMCAVNLEFNLALNMNLTYTHRVGFYSSLSRYDRMAVEEFFGWGVGEVPRTKIQTDGCSPEGGKWPEEHNLLDCHLCDKPLENGSLKIERIVEVPSTLLNSNCPTQTWCRKELQIFLQENSLSNTIFQLPSSICSPLKTDANFLSTRNLFYNKYWNKHGRLPWKHTRDRYKGYNRYQKRVLPLSPRELNIAVHIRRGDFL--ETKSSRKITKDKVFATIISRVLTVIGNVGGSLAAMPVAIHIYSEGQLKKTNVFSTHTVELQDKEYYDHDGQPREESWWTSLITTTL-RDDRYSSCAWEGRFRVKFHISEDTLLSLHNMNVADVFIGSHSGMSTHLVWSISRGVNLLPQPSSVDIEIGKKGYLCCSIPFKNDDGHFSLSTFRWYWEAYAYANEESA 403
            +SDGIGHSM  VN +FN A+++ LTYTHR+G YSSL+  DR AVE FFGWG GEVPRTKIQ +GC P+GG WPE +    CH C++P  +G+L+I+ +VE+P+ + ++       C+   + FL E+  S+TIFQ     CSP  TD NFL +++LF++KYW++HG  PW H R+      +  +R +  +P ELN+A+HIRRGDFL  ET++ R ITKD+VFA ++   L+V+   GG  + MP+ +HIYSEG+L+K +V S H +ELQD  YYD  G PR   WW SLI  TL R +     + + R  V FHISEDTLL LH M  AD+FIGS SG+S  LVWS+SRGV L+P   +++IE GKKG +CCSIPF N+DG F    F  YW AY+ AN ESA
Sbjct:  164 TSDGIGHSMGVVNRDFNFAISLKLTYTHRLGTYSSLTFEDRNAVEAFFGWGSGEVPRTKIQQEGCVPQGGFWPEPNQTTACHTCERPRISGALRIQNLVEIPADMRSNCLHPDDPCQSYRKRFLNEHQESHTIFQASRKACSPPATDNNFLVSKSLFFHKYWDQHGLRPW-HPRNLT---TQAGERPIRYNPEELNVAIHIRRGDFLIPETQAKRGITKDEVFAKVLINALSVVQKEGGVFSEMPIVVHIYSEGRLQKGSVLSIHMIELQDNLYYDSSGTPRNAVWWKSLILKTLSRSNAIELESLKERLTVLFHISEDTLLCLHEMVSADIFIGSKSGLSNALVWSLSRGVVLIPYAPTINIEKGKKGNVCCSIPFANEDGIFDTKQFSMYWNAYSQANSESA 563          
BLAST of Gcaud2348.t1 vs. uniprot
Match: A0A2V3IXX1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXX1_9FLOR)

HSP 1 Score: 218 bits (554), Expect = 8.320e-62
Identity = 152/447 (34.00%), Postives = 221/447 (49.44%), Query Frame = 0
Query:    2 MSSDGIGHSMCAVNLEFNLALNMNLTYTHRVGFYSSLSRYDRMAVEEFFGWGVGEVPRTKIQTDGCSPEGGKWPEEHNLLDCHLCDKPLENGS---LKIERIVEVPSTLL-------NSNCPTQ--TWCRKELQIFLQENSLSNTIFQLPSSICSPLKTDANFLS-TRNLFYNKYWNKHG-RLPWKHTRDRYKGYNRYQKRVLPL------------SPRELNIAVHIRRGDF-LETKSSRKITKDKVFATIISRVLTVIGNVGGSLAAMPVAIHIYSEGQLKKTNVFSTHTVELQDKEYYDHDGQPREESWWTSLI----------------TTTLRDDRYSSCAWEGRFRVKFHISEDTLLSLHNMNVADVFIGSHSGMSTHLVWSISRGVNLLPQPSSVDIEIGKKGYLCCSIPFKNDDG--HFSLSTFRWYWEAYAYANEESA 403
            ++SDG+GH+   +N E  +AL + LTYTHRV  Y SL+R +  AVE FFGWG G++PR  I+   C   G       +   C  C+    N S   +K   +VE+P  L         S  P    + C K+   F++ ++   TIFQ+P   C+    D+ F   TR   +N+YW++HG R  +    D  K   R+ K  +PL                LNIA+H RRGDF +ET+  R +     F   +   +T++   GG  + MPV +H+YSEG   K + +  H V    K Y D DG  R+  W T +I                T+  R +      + G  +V+ HI+ +TL SLH M  AD+FIGS SGMS H+V ++SRGV+L+P  S +    G+    CC   F   +G  H   S  + +W+A+ +ANE SA
Sbjct:   86 VASDGLGHNSGVMNAEIGIALRLGLTYTHRVSLYGSLTRDNPNAVENFFGWGHGQIPREFIRESFCKSSGN-----FSRAKCQPCEGLKSNSSFHEMKFHHLVEIPYNLTYGRMWCSRSGSPLHESSNCMKQANDFVERHNQPYTIFQMPLDTCASNPVDSFFDPVTRAYLFNQYWDRHGSRSRYSTEDDEKKSSVRFTKEGIPLLRATVRRRPISYPEHALNIAIHARRGDFFMETR--RSMVSTAAFGRTVRDFMTIVQKQGGVFSRMPVIVHLYSEGINVKGSKYGGHDVSGMAKSYKDSDGTDRDAGWVTKVIRGIGLSEPEVQSSVNSTSASRKNAPRLSLFPGGLKVQLHIATNTLQSLHEMIAADMFIGSASGMSMHVVATMSRGVHLVP--SFLTTYSGE----CCHSAFDPQNGGLHDPQSVAK-FWKAFTFANEASA 518          
BLAST of Gcaud2348.t1 vs. uniprot
Match: R7QPD3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPD3_CHOCR)

HSP 1 Score: 130 bits (327), Expect = 3.430e-31
Identity = 97/293 (33.11%), Postives = 146/293 (49.83%), Query Frame = 0
Query:  138 LPSSICSPLKTDANFL-STRNLFYNKYWNKHGRLPWKHTRDRYKG---YNRYQ--------------KRVLP-LSPRELNIAVHIRRGDFLETKSSRKITKDKVFATIISRVLTVIGNVGGSLAAMPVAIHIYSEGQLKKTNVFST-HTVELQDKEYYDHDGQPREESWWTSLITTTLRDDRYSSCAWEGRFRVKFHISEDTLLSLHNMNVADVFIGSHSGMSTHLVWSISRGVNLLPQPSSVDIEIGKKGYLCCSIPFKNDDGHFS---LSTFRWYWEAYAYANEESAWHSL 407
            +P  +C+   T + FL   R  FY+KYW  HG      +R R +    ++RY+              + +LP L   EL IA+H RRGDF   K  R +     F+ ++ +V+  I     + A MP+A+HIYSEG  KK       H ++  + +++D DG+  +    T +     +DD      +  R RV  H+S+DT+ SLH M  AD+F+GS SGMS HLV S++RG   L  P+ ++     +G+    + F    GH     L   R YW  Y+ ANE+SA  +L
Sbjct:    1 MPHKVCAKSPTYSKFLPEARAFFYHKYWAAHGMYSEHDSRHRSRAISSFHRYRDSWASTLRIPGVPPRGILPRLHEHELTIAIHARRGDFF--KVGRPMVPVATFSRVLRQVMAEIQEHNKTFARMPIAVHIYSEGNPKKGYKGDVGHDIKRLNSDFHDADGKVLDVVAVTEIFNDKKQDDL--GIVFRNRLRVVLHVSQDTVESLHEMIAADLFLGSMSGMSLHLVGSLNRGAMQL-LPTRIEHTDEWRGH----VKFDPRTGHIGKKELKGMRRYWREYSDANEKSAKRAL 284          
The following BLAST results are available for this feature:
BLAST of Gcaud2348.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J048_9FLOR2.440e-18059.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBV6_CHOCR6.340e-13651.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IXX1_9FLOR8.320e-6234.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPD3_CHOCR3.430e-3133.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:33878..35146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2348.t1Gcaud2348.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 33878..35146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2348.t1 ID=Gcaud2348.t1|Name=Gcaud2348.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=423bp
MMSSDGIGHSMCAVNLEFNLALNMNLTYTHRVGFYSSLSRYDRMAVEEFF
GWGVGEVPRTKIQTDGCSPEGGKWPEEHNLLDCHLCDKPLENGSLKIERI
VEVPSTLLNSNCPTQTWCRKELQIFLQENSLSNTIFQLPSSICSPLKTDA
NFLSTRNLFYNKYWNKHGRLPWKHTRDRYKGYNRYQKRVLPLSPRELNIA
VHIRRGDFLETKSSRKITKDKVFATIISRVLTVIGNVGGSLAAMPVAIHI
YSEGQLKKTNVFSTHTVELQDKEYYDHDGQPREESWWTSLITTTLRDDRY
SSCAWEGRFRVKFHISEDTLLSLHNMNVADVFIGSHSGMSTHLVWSISRG
VNLLPQPSSVDIEIGKKGYLCCSIPFKNDDGHFSLSTFRWYWEAYAYANE
ESAWHSLHVNNENESLSNTSSF*
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