Gcaud2337.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2337.t2
Unique NameGcaud2337.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length303
Homology
BLAST of Gcaud2337.t2 vs. uniprot
Match: A0A2V3J2Z2_9FLOR (MOSC_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z2_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 4.370e-79
Identity = 141/319 (44.20%), Postives = 189/319 (59.25%), Query Frame = 0
Query:    1 LANPDAQSCTSETHDQGLQNDLEHLSTALTQEEEKLVSVGQTTAVEQ--------------AGDKEQ---------GRVSIIHLYIQPIHGCPPQAVTSIRLTQHGVENHLMYAVSDFTGRYISNEKVPVLSEVTPTILENGHLRLSAPGLSTLMHEPKFWGQKMKITIHGIQYEAVDQGDGVSQFFASYLEIPGARLLLIRPPPVSDKGHRLFRTWPTADRPLLLIGKEEKGASAVDNGRALVGTNVVISASESDLTSSTSIKIDDYLFEIVKIPSESSYERVPPHHLLGGREALVPVNLGRNEWVVKEDQTVIIKNS 296
            L NPDA+   SE     L   +       T EE+    V + T ++               A D E          G +S+  L+IQPIHGC  Q+V S+RL Q+GVENHLMYAV++FTGRYIS++KVP L EV+PT+LENG L L AP ++ L H+ K WGQ  +ITI G+QYEAVDQGD VS+FF  +LEIPG RLLLIRPPP++ +  + FRTWP+ADRPLLL G +    ++  N    +  NV +S + S++ S   IKI DY FE+VK    +S +     +       L+PV+L R+EW ++  Q V +  S
Sbjct:  138 LTNPDARPLPSEASQVKLHEAMPQFEKTATAEEQVYAHVAEKTDIDDDDTXSEVQESPTLTAADAEADGSQLQESTGEISVAQLHIQPIHGCRAQSVASLRLNQNGVENHLMYAVAEFTGRYISDDKVPALREVSPTVLENGDLYLEAPDVTPLRHQRKSWGQMKRITICGVQYEAVDQGDIVSKFFVDFLEIPGVRLLLIRPPPIAGESGQTFRTWPSADRPLLLAGADVVPQNS--NSDLPLRPNVGLSNTHSEMESWMQIKIGDYSFELVKTDVSNSTDSTTTENQKHAGHVLLPVDLKRDEWTLRSGQVVTVTES 454          
BLAST of Gcaud2337.t2 vs. uniprot
Match: A0A1H0NTI6_9ACTN (MOSC domain-containing protein n=2 Tax=Actinopolyspora TaxID=1849 RepID=A0A1H0NTI6_9ACTN)

HSP 1 Score: 66.6 bits (161), Expect = 4.920e-9
Identity = 37/123 (30.08%), Postives = 62/123 (50.41%), Query Frame = 0
Query:   65 PIHGCPPQAVTSIRLTQHGVENHLMYAVSDFTGRYISNEKVPVLSEVTPTILENGH-LRLSAPGLSTLMHEPKFWGQKMKITIHGIQYEAVDQGDGVSQFFASYLEIPGARLLLIRPPPVSDK 186
            P+ GC    V+ + LT  G+ +   + V+D  G + +    P L+ V P +   G  L L A G+  L         +  +T+HG+ Y  +DQGD V+++F+   E+ GAR  L+  PP  ++
Sbjct:   11 PVKGCAGDPVSDVELTASGLRHDRRFMVTDEDGLFRTQRGSPSLARVHPEVSSGGERLTLRAEGVEPLHLSVDTGLPRRDVTLHGVNYRGIDQGDAVAEWFS---EVIGARSRLVCVPPEHER 130          
BLAST of Gcaud2337.t2 vs. uniprot
Match: A0A7W7WWU0_9PSEU (MOSC domain-containing protein n=2 Tax=Saccharothrix violaceirubra TaxID=413306 RepID=A0A7W7WWU0_9PSEU)

HSP 1 Score: 61.6 bits (148), Expect = 2.300e-7
Identity = 40/127 (31.50%), Postives = 63/127 (49.61%), Query Frame = 0
Query:   58 IIHLYIQPIHGCPPQAVTSIRLTQHGVENHLMYAVSDFTGRYISNEKVPVLSEVTPTILENGHLRLSAP--GLSTLMHEPKFWGQKMKITIHGIQYEAVDQGDGVSQFFASYLEIPGARLLLIRPPP 182
            I  L   P+ GC    +T+  LT  G+ +   Y V+   G + +    P L+ +TPT  + G L L+AP  G + + H+P     +  +T+ G+ YEA+DQGD  + +    L  P     L+R PP
Sbjct:    4 ITRLTTYPVKGCAGVDLTTTTLTTAGLRHDRDYMVTSPDGTFRTQRTDPTLALITPTADDTG-LTLTAPDAGETRIPHDPT--APRRTVTLFGVHYEALDQGDEAADWLTHVLRTPSR---LVRVPP 124          
BLAST of Gcaud2337.t2 vs. uniprot
Match: C3Z3Q2_BRAFL (MOSC domain-containing protein n=3 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z3Q2_BRAFL)

HSP 1 Score: 60.1 bits (144), Expect = 1.020e-6
Identity = 45/149 (30.20%), Postives = 72/149 (48.32%), Query Frame = 0
Query:   51 KEQGRVSIIHLYIQPIHGCPPQAVTSIRLTQHGVENHLM----YAVSDFTGRYISNEKVPVLSEVTPTILENGHLRLSAPGLSTLMHEPKF-WGQKMKITIHGIQYEAVDQGDGVSQFFASYLEIPGARLLLIRPPPVSDKGHRLFRTW 194
            +E GRVS I +Y  P+  C   AV +  +T  G++   +    + V +    +++  + P L  VT ++ E+G L L APG  TL        G+ +   +  +  E VD GD  +++F+SYL  PG RLL       S+   R  + W
Sbjct:   17 EEVGRVSGIFIY--PVKSCRGLAVEAAEVTPTGLKYQALMDRHWLVVNEKDHFLTARQEPSLVLVTSSLAEDGSLCLDAPGKDTLRLPVNLEQGRLVHTKVFAVAGEGVDCGDEAAEWFSSYLNRPGTRLLF----SASNCKKRDLKEW 159          
The following BLAST results are available for this feature:
BLAST of Gcaud2337.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J2Z2_9FLOR4.370e-7944.20MOSC_N domain-containing protein n=1 Tax=Gracilari... [more]
A0A1H0NTI6_9ACTN4.920e-930.08MOSC domain-containing protein n=2 Tax=Actinopolys... [more]
A0A7W7WWU0_9PSEU2.300e-731.50MOSC domain-containing protein n=2 Tax=Saccharothr... [more]
C3Z3Q2_BRAFL1.020e-630.20MOSC domain-containing protein n=3 Tax=Branchiosto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005303MOSC, N-terminal beta barrelPFAMPF03476MOSC_Ncoord: 57..170
e-value: 2.3E-13
score: 50.1
NoneNo IPR availableSUPERFAMILY141673MOSC N-terminal domain-likecoord: 60..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:7534..8442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2337.t2Gcaud2337.t2Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 7534..8442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2337.t2 ID=Gcaud2337.t2|Name=Gcaud2337.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=303bp
LANPDAQSCTSETHDQGLQNDLEHLSTALTQEEEKLVSVGQTTAVEQAGD
KEQGRVSIIHLYIQPIHGCPPQAVTSIRLTQHGVENHLMYAVSDFTGRYI
SNEKVPVLSEVTPTILENGHLRLSAPGLSTLMHEPKFWGQKMKITIHGIQ
YEAVDQGDGVSQFFASYLEIPGARLLLIRPPPVSDKGHRLFRTWPTADRP
LLLIGKEEKGASAVDNGRALVGTNVVISASESDLTSSTSIKIDDYLFEIV
KIPSESSYERVPPHHLLGGREALVPVNLGRNEWVVKEDQTVIIKNSGVDQ
SP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005303MOSC_N