Gcaud1791.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1791.t2
Unique NameGcaud1791.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1532
Homology
BLAST of Gcaud1791.t2 vs. uniprot
Match: A0A2V3IRP8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP8_9FLOR)

HSP 1 Score: 1700 bits (4403), Expect = 0.000e+0
Identity = 921/1419 (64.90%), Postives = 1079/1419 (76.04%), Query Frame = 0
Query:    9 FKRSCAARYAPLVQLSATQHCDAAVRTA-SSHRSVLSLLSEHLPAANRPPLRLLTPAQLKETSSRSFARTLLDGARDADRHLAAVAAALKLRLEQLTVAGRHERFVLPLLNVVAVWVCEPQIAQAVSVSSMREAPTVLLVARPTAQDNAALQSVRESLASHPAPLLVLRLNEQKDAQQTDTEHSEHSAVAVAAQLDSSAR---------------AVLNEQLNDAVAAADSARRAVRSSFRSWFSTSSASTPAMPTVDSKPPPRAPIDDASSSSATDAAQLAPNTLAAAMRTLADLALMAGRYTDASDAYRMLAAEVRTFSSTAAIHHASALELGAISLALIDGSNAAIGSALESAVLRYVDANRPELAARAALRAVDFCLAAGYPDSAAGVLVRAIGALRPGISDTT-PPLVDAVLAVLCAVCTEAFVTLKHPRRASRFAFFAAIRFARLRYFAAXXXXXXAIDGSALQRAAIRHHVQYWMGEAALSAGNPVSAVRHLSSVLVEAKKSSQPCEVDVHASVVRAFLRALKIGAVHKLSTRWDSGVAFPLLDTAFSYVRTHDMSSCDGDWHALEDEVLEDAEFFEKLAEGDGS-VKRERRIEALVSELRHAKRSGQNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVLGEVVSLHVRLRNPLQFPVFVRSISAVVSLDGQCYSLFDKANDDTEGDPMP-VQLLEVPAVTISPNSEESVVLQIIGQKAGVLQCIGVCWSFTIGTNASFVADSATVFAPGFALLHRHGRRLNDTRHQRASDVPLYEEDKSLTVTIAPLAPRLKTTLYVPHFPLVSQESLDPTLIMRAGEVRRGQLELENAGGVALDHIVFRIGTPQTMYLGVEPEIEHNGDTKRVFAVGIKEQQVEQSEAVAAGRIALRLAPGEKTRVLVWIRAAVSNAVFAQRSPLSENIKLQR-SGSRNEDKAESGPPLRDVRLAIAYGRGRLRMCRVSMRFRVHPSVMVSPRFLREADLSSISPDASNKIGCLFGVEVEHAGPSEMENVDFDITKLTVTSKHGWKPMLLPTPAVPMAMKPGDMRPSNNTLRINETATFFVFLVRDRNVKDGCDLNEKLDGLLPSSHQWETYVADLAGNYTRNDEQKVLDTVNDVIAEQGLGKNCRDQDDDRWDRKAVTHFVVCSKHHSHMHRHGMGHDRPDRVYVTVGWRTNEDNQGDIQIPSIDPLRWMKEAKTHEHGNETAIASPENLPPVNPNVMQDVVEGIGALQVNDYEKDPVQVRVSHPERVEHNFFRRITEDELDMGSEQSSVVAYPAVVPVDVLVKNVSNGVLDVAFAAPTEGGVADGDRGRYWTGDVSMSLRSIAPGAERTICLTAVLISPGQYNMCRFTMLYQTSSFVPNRRRQHIAVSPSYMTVEAVGDYKFCEDEVLEEQTEIAPLRRSSRR 1407
            FKR  AAR+AP +QL AT HCDAAVRTA ++HR++ SLLS +LP +  PPLR+LT   +  T  R+  R LLD  RD    LA ++ AL  RLE  T+A  H+ F LPLL VVAVWVCEP I+ A++     + P VLLVARPTAQD  ALQ V++SLASHPAP+LVLR                                              A LN +LNDA  AA+  RR+ R+SFRSWFSTS+ ST    T D      +  D  +++S +DA +LAPNT+A AMR LADLALMAGRYTDA +AYR LAAEVR+ SS A++HHASALE+ AISLAL+DGSN+AIGSA ESA++RY DANRPELAARAALRAV FCLAAG+PDSAAGVLVRAI  LRP  + T+ PPL+D VLA LCA C +AF  LKH RRASRFAFFAA+ FARLR+F A      A+D SALQR +IRHHVQYWMGEAALS+  PV+AVR+ SSVL EA+ S Q C++ +++SVV+AFLRALK GA  +LS RWDSGVAFPLL+ AFS+V+THDM   D +WHALEDEVLED EFFEKLA G  + V+RERR+EALVSELRHAKRSG+NDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAV+GE V LH RL NPLQFPV++ S+SAVVSLDGQCYSLFDK N +T+ DP P VQL E   +TI  NS   VVL+I+  KA  LQ IG+CW F+IG   +F+ D  TVFAPGFALLHR GRRLNDTR  RASDVPLYEEDKSLTVTIAP+AP+LK  L +PHFPL  Q+  DP LIMRAGEVR+G LELEN G + LD IV RIGTPQT+YLG++ E+E  G+ KRVFA+G+KEQ VEQSE VAA R++L+L PGE TR+ VWIRAA+++A FAQRSPLSENIKLQR   SRN+D+ + G P RD++LAIAYG  + RM RVSM F+VHPS+MVSPRFLREADL  ISP AS+KIGCLFGVEVEHAGPSE E+ DFDIT+LTVTS+HGWKPMLLP P VP A K  D+RP+ NTLRINETATFFVFLVR+R+VK+    N + D   P +H W TY+           + K ++ ++       L K   ++DD +WDR A THFVVCSKHH ++HRHG  +DR DRVYVTVGWRT++ N+GDI IPSIDPLRWMK++K  + G E A  + E    VNPNVMQDVVEGIGALQ NDYE+DPVQVRV HP +VEH+FFR       D   +QSS VAYPAVVPVDVLVKNVS+GVLDVAFAA TEGGVADGDRGRYWTGDVSMSLR+IAPGAERTICLTAVLISPG+YNMCRFTMLYQTSSFVPNR+RQHI++ PS+MTVEAVGDYKFCED+ L ++ + APL  S R+
Sbjct:   22 FKRRAAARHAPSLQLRATLHCDAAVRTADATHRNLRSLLSAYLPNSAAPPLRVLTAEHVAITPPRALPRALLDSLRDPPSRLAKLSDALLDRLESATLALSHDIFALPLLTVVAVWVCEPDISAALAAFPTHQPPLVLLVARPTAQDAHALQRVQQSLASHPAPVLVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLNLRLNDAALAANRIRRSTRTSFRSWFSTSTTSTXR--TSDDSHLSVSTSDLTAATSTSDATRLAPNTVAFAMRQLADLALMAGRYTDACEAYRNLAAEVRSLSSAASVHHASALEMEAISLALLDGSNSAIGSAFESAIVRYSDANRPELAARAALRAVHFCLAAGFPDSAAGVLVRAITLLRPSEAQTSAPPLLDVVLATLCAACADAFTRLKHMRRASRFAFFAAVSFARLRHFVAAATVATAVDASALQRPSIRHHVQYWMGEAALSSSKPVAAVRNFSSVLAEAQPSPQSCDLQLYSSVVQAFLRALKNGAAERLSARWDSGVAFPLLEVAFSFVQTHDMGDTDSEWHALEDEVLEDVEFFEKLANGRKTGVQRERRVEALVSELRHAKRSGKNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVIGEPVFLHARLTNPLQFPVYMSSLSAVVSLDGQCYSLFDKQNKNTDTDPPPPVQLFEAEPLTIPANSSRDVVLRIVACKARTLQFIGLCWKFSIGMLPTFIPDDNTVFAPGFALLHRRGRRLNDTRRHRASDVPLYEEDKSLTVTIAPVAPKLKAELCIPHFPLSMQDEDDPNLIMRAGEVRKGHLELENDGPMPLDSIVLRIGTPQTLYLGLQLEVEGEGEQKRVFAIGMKEQPVEQSEIVAAARVSLQLDPGESTRIPVWIRAAINSAAFAQRSPLSENIKLQRRQNSRNDDRTDGGLPQRDIKLAIAYGSEQPRMSRVSMSFKVHPSIMVSPRFLREADLRMISPQASDKIGCLFGVEVEHAGPSETEDADFDITELTVTSRHGWKPMLLPKPVVPKAAKNLDIRPAPNTLRINETATFFVFLVRNRDVKE----NVERDSTEPHAHMWGTYICHFDNEPHACRDMKEVELLSPTALNNDLSKGDVNEDDHKWDRCATTHFVVCSKHHLNVHRHGNSYDRLDRVYVTVGWRTSDGNEGDIHIPSIDPLRWMKDSKKADSGQENAPPAVEAQSQVNPNVMQDVVEGIGALQANDYEEDPVQVRVCHPLKVEHDFFRNSEVGNNDSTDDQSSAVAYPAVVPVDVLVKNVSSGVLDVAFAASTEGGVADGDRGRYWTGDVSMSLRAIAPGAERTICLTAVLISPGRYNMCRFTMLYQTSSFVPNRKRQHISMKPSFMTVEAVGDYKFCEDDALVDRIDTAPLMPSRRK 1434          
BLAST of Gcaud1791.t2 vs. uniprot
Match: A0A7S1XAP5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAP5_9RHOD)

HSP 1 Score: 73.9 bits (180), Expect = 1.450e-9
Identity = 89/376 (23.67%), Postives = 153/376 (40.69%), Query Frame = 0
Query:  701 VTISPNSEESVVLQIIGQKAGVLQCIGVCWSFTIGTNASFVADSATVFAPGFALLHRHGRRLNDTRHQRASDVPLYEEDKSLTVTIAPLAPRLKTTLYVPHFPLVSQESLDPTLIMRAGEVRRGQLELENAGGVALDHIVFRIGTPQTMYLGVEPEIEHNGDTKRVFAVGIKEQQVEQSEAVAAGRIALRLAPGEKTRVLVWIRAAVSNAVFAQRSPLSENIKLQRSGSRNEDKAESGPPLRDVRLAIAYGRGR-----LRMCRVSMRFRVHPSVMVSPRFLREADLSSISPDASNKIGCLFGVEVEHAGPSEMENVDFDITKLTVTSKHGWKPMLLPTPAVPMAMKPGDMRPSNNT---LRINETATFFVFLVRD 1068
            V +  +S+  V L +   KAG  + + + WSF +        + +    P    + R+G+RLN TR +R S VPLY  + SL V +     R+   L           + + +  +R G+   G +++ N G   +  I    GTP +++   +   E +    R F                  R  L +  GE      W+RA   N+       +S  +++                +   ++ +  G+GR      R+ R+     V P ++  PRFLR    +      S +   + GVE+EH+     E   + I +L V++   WK   L TP+ P  +   ++    N+   LR+NETAT F+ L R+
Sbjct:    3 VVLDQHSKVQVTLSVRPSKAGDARLVALRWSFFLLGEE----NESQHACPCRVEIRRNGQRLNSTRKERCSPVPLYGPENSLRVRVCKGGSRITVRL-----------NSNVSSYVREGQQWVGSVDVLNQGSSPVRSIHVTNGTPSSIFFDPD-SCEISEKRNRSF------------------RCNLTIVEGESFCHPCWLRATSGNS-----DGISNLVRV----------------VFFYKVDLVDGKGRDLGQVWRIARLRHTVEVKPCIVAFPRFLRS---NPFIQGRSREF--ILGVEIEHSWTEGGET--YRIVELGVSASSCWKVTGLCTPSYPSVLSEEEVAKIRNSPVQLRVNETATLFLTLRRN 316          
The following BLAST results are available for this feature:
BLAST of Gcaud1791.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRP8_9FLOR0.000e+064.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XAP5_9RHOD1.450e-923.67Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024420TRAPP III complex, Trs85PFAMPF12739TRAPPC-Trs85coord: 213..447
e-value: 1.3E-15
score: 57.3
IPR024420TRAPP III complex, Trs85PANTHERPTHR12975TRANSPORT PROTEIN TRAPPcoord: 223..1354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1434..1464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1402..1429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1398..1509
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 423..441
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 442..460
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 461..1531
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 403..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_472_length_24489_cov_3.453562contigNODE_472_length_24489_cov_3.453562:14284..18879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1791.t2Gcaud1791.t2Gracilaria caudata M_176_S67 malemRNANODE_472_length_24489_cov_3.453562 14284..18879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1791.t2 ID=Gcaud1791.t2|Name=Gcaud1791.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1532bp
MGDDAARHFKRSCAARYAPLVQLSATQHCDAAVRTASSHRSVLSLLSEHL
PAANRPPLRLLTPAQLKETSSRSFARTLLDGARDADRHLAAVAAALKLRL
EQLTVAGRHERFVLPLLNVVAVWVCEPQIAQAVSVSSMREAPTVLLVARP
TAQDNAALQSVRESLASHPAPLLVLRLNEQKDAQQTDTEHSEHSAVAVAA
QLDSSARAVLNEQLNDAVAAADSARRAVRSSFRSWFSTSSASTPAMPTVD
SKPPPRAPIDDASSSSATDAAQLAPNTLAAAMRTLADLALMAGRYTDASD
AYRMLAAEVRTFSSTAAIHHASALELGAISLALIDGSNAAIGSALESAVL
RYVDANRPELAARAALRAVDFCLAAGYPDSAAGVLVRAIGALRPGISDTT
PPLVDAVLAVLCAVCTEAFVTLKHPRRASRFAFFAAIRFARLRYFAAAAA
AAAAIDGSALQRAAIRHHVQYWMGEAALSAGNPVSAVRHLSSVLVEAKKS
SQPCEVDVHASVVRAFLRALKIGAVHKLSTRWDSGVAFPLLDTAFSYVRT
HDMSSCDGDWHALEDEVLEDAEFFEKLAEGDGSVKRERRIEALVSELRHA
KRSGQNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVLGEVVSLHV
RLRNPLQFPVFVRSISAVVSLDGQCYSLFDKANDDTEGDPMPVQLLEVPA
VTISPNSEESVVLQIIGQKAGVLQCIGVCWSFTIGTNASFVADSATVFAP
GFALLHRHGRRLNDTRHQRASDVPLYEEDKSLTVTIAPLAPRLKTTLYVP
HFPLVSQESLDPTLIMRAGEVRRGQLELENAGGVALDHIVFRIGTPQTMY
LGVEPEIEHNGDTKRVFAVGIKEQQVEQSEAVAAGRIALRLAPGEKTRVL
VWIRAAVSNAVFAQRSPLSENIKLQRSGSRNEDKAESGPPLRDVRLAIAY
GRGRLRMCRVSMRFRVHPSVMVSPRFLREADLSSISPDASNKIGCLFGVE
VEHAGPSEMENVDFDITKLTVTSKHGWKPMLLPTPAVPMAMKPGDMRPSN
NTLRINETATFFVFLVRDRNVKDGCDLNEKLDGLLPSSHQWETYVADLAG
NYTRNDEQKVLDTVNDVIAEQGLGKNCRDQDDDRWDRKAVTHFVVCSKHH
SHMHRHGMGHDRPDRVYVTVGWRTNEDNQGDIQIPSIDPLRWMKEAKTHE
HGNETAIASPENLPPVNPNVMQDVVEGIGALQVNDYEKDPVQVRVSHPER
VEHNFFRRITEDELDMGSEQSSVVAYPAVVPVDVLVKNVSNGVLDVAFAA
PTEGGVADGDRGRYWTGDVSMSLRSIAPGAERTICLTAVLISPGQYNMCR
FTMLYQTSSFVPNRRRQHIAVSPSYMTVEAVGDYKFCEDEVLEEQTEIAP
LRRSSRRMSTGSTGARTSQGASRLSTIPSEDKGTKGIKLSDDDRTGGSGS
RADKDARDDVNLSKPIADLETSGASVLSGRSRKQDSLGRDASPIRSGSGR
IIRTRGEGKSAQLLSELKNDAFWNDADTDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024420TRAPP_III_complex_Trs85