Gcaud1794.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1794.t1
Unique NameGcaud1794.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length713
Homology
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A7S1TES6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TES6_9RHOD)

HSP 1 Score: 102 bits (253), Expect = 8.760e-21
Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = 0
Query:  587 VPSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSR 671
            +PSRFCH+C+RT K  R  VC+ IR GTCRKVICEKCF K+ + N++ A    S W C HC   CP RAQC TY ++N++LR  R
Sbjct:  115 IPSRFCHICARTAKTARQIVCSNIRLGTCRKVICEKCFEKFEW-NWELAAS-GSDWTCTHCVGVCPDRAQCSTYCKVNEKLRKRR 197          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A1X6P314_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P314_PORUM)

HSP 1 Score: 105 bits (262), Expect = 3.150e-20
Identity = 60/128 (46.88%), Postives = 73/128 (57.03%), Query Frame = 0
Query:  574 PKKKRRAAKFEKPVPSRFCHVCSRTPKNVRLAVCARIR-EGTCRKVICEKCFAKYAYGN-----FDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQESAKRGAPETPTDQ-PRARKR 694
            P +KRR A F KPVPSRFCH+CSRT   VR  VC  +    TCRKV+C++CF            +D A+    AW C HC  +CP RAQCR Y R N+RLR+ R     A  GA    T + P AR+R
Sbjct:  271 PPRKRRKATFSKPVPSRFCHLCSRTSPAVRHIVCGALATSSTCRKVVCDRCFTTAGAAGINGVTWDQAVAAGPAWRCCHCVGSCPDRAQCRNYTRTNERLRLMRSASGGAGLGAXXXTTRRAPAARRR 398          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A7S1TIE4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIE4_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 3.580e-20
Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 0
Query:  573 RPKKKRRAAKFEKPVPSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQESAKR 679
            +P ++ +  K+ K +PS  CH+C R+   +   VC  IR G CRKV+C+KCF  Y + +F++A +  S WLC HCR+ CP RAQC  YQR+N R ++  + +  A++
Sbjct:  156 KPVRQFKVKKYFKRIPSHHCHICRRSALMIPTVVCLNIRGGLCRKVVCQKCFETYQW-DFESAAKEDSGWLCTHCREVCPPRAQCFIYQRVNTRRKIRNMEKMKARK 261          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A7S1XH97_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH97_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 1.780e-19
Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 0
Query:  573 RPKKKRRAAKFEKPVPSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQESAKR 679
            +P ++ +  K+ K +PS  CH+C R+   +   VC  IR G CRKV+C+KCF  Y + +F++A +  S WLC HCR+ CP RAQC  YQR+N R ++  + +  A++
Sbjct:  253 KPVRQFKVKKYFKRIPSHHCHICRRSALMIPTVVCLNIRGGLCRKVVCQKCFETYQW-DFESAAKEDSGWLCTHCREVCPPRAQCFIYQRVNTRRKIRNMEKMKARK 358          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A5J4Z451_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z451_PORPP)

HSP 1 Score: 99.4 bits (246), Expect = 1.180e-18
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 0
Query:  586 PVPSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQESAKR 679
            P PSRFCH+C+++ + VR AVC  +  G CRKVICEKCF +  + +F+ A+   S W+C HC   CP RAQC  Y++ N +++V R  Q  A R
Sbjct:  171 PEPSRFCHICTKSSRMVRQAVCCNLLSGVCRKVICEKCFEENEW-DFELAVSEDSGWVCSHCAGVCPNRAQCTFYRKANKKVQVKRKEQRRAAR 263          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A2V3IER0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER0_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 2.290e-18
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  575 KKKRRAAKFEKPVPSRFCHVCSRTP-KNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDR 666
            K  R+   + KPV SRFCH+CSR P K    A C R+REG CRK++CE+C  +  + ++DA       WLCPHC + CP R+QC  Y RIN R
Sbjct:  161 KSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCIREQGW-DYDAISANPDQWLCPHCAEICPPRSQCHIYNRINAR 252          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A5J4Z0I0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0I0_PORPP)

HSP 1 Score: 99.0 bits (245), Expect = 4.820e-18
Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 0
Query:  588 PSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQESAKR 679
            PSRFCH+C R    V+  VC  I +G+CRKV+CE CF    + +F+AAL   ++W CPHC   CP RAQC+TY+R NDR R   L  +  K+
Sbjct:  293 PSRFCHICQRKQGVVKHIVCCNISQGSCRKVVCELCFEDNDW-DFEAALAQRTSWACPHCLGLCPPRAQCKTYERTNDRRRNGTLNSKKPKK 383          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A5J4Z5T1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5T1_PORPP)

HSP 1 Score: 97.4 bits (241), Expect = 1.030e-17
Identity = 51/132 (38.64%), Postives = 75/132 (56.82%), Query Frame = 0
Query:  541 PTRTPPPEPRCGEHKRTADVALNVSDEELLRTRPKKKRRAAKFEKPVPSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRL 672
            P + P  +P   E  + A V   +   E L ++PK +R    +     SRFCH+C+R+  +VR   C     G CRK+ICEKCF +Y + +++AA +  + W C HC+  CP+RAQC TY+R N R R+  L
Sbjct:  299 PRKKPASKPEKAELVKDASVLKEL---EQLASKPKIRR----YSNSTASRFCHICARSMDSVRAISCFNTLFGVCRKIICEKCFEQYGW-DWEAASKPGARWSCAHCKGICPERAQCNTYKRTNQRRRLKGL 422          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A7S1TKP7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKP7_9RHOD)

HSP 1 Score: 94.4 bits (233), Expect = 1.640e-17
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
Query:  588 PSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQ 674
            PS+FCH+C+R+ K VR AVC  + + TCRKVICEKCF  + + +F+ A+   S W C HC + CP  AQC  Y R N ++   R RQ
Sbjct:  141 PSKFCHICTRSYKAVRQAVCRNLVKNTCRKVICEKCFEDFGW-DFELAISEDSGWCCCHCAEKCPSTAQCTHYNRANPKVEARRKRQ 226          
BLAST of Gcaud1794.t1 vs. uniprot
Match: A0A5J4YS79_PORPP (Uncharacterized protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS79_PORPP)

HSP 1 Score: 94.4 bits (233), Expect = 4.690e-17
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 0
Query:  588 PSRFCHVCSRTPKNVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDACPQRAQCRTYQRINDRLRVSRLRQESAKRG 680
            PSRFCH+C+++ K VR AVC  ++ G+CRKVICEKCFA+  + +F+ A    + W C HC   CP RAQC  Y++   R R SR      K+G
Sbjct:  187 PSRFCHICTKSAKVVRQAVCYNVQTGSCRKVICEKCFAENGW-DFELATAPDNEWYCCHCMRICPTRAQCNVYKKNTQRTRPSRAHGCKGKKG 278          
The following BLAST results are available for this feature:
BLAST of Gcaud1794.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A7S1TES6_9RHOD8.760e-2155.29Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6P314_PORUM3.150e-2046.88Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TIE4_9RHOD3.580e-2041.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XH97_9RHOD1.780e-1941.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z451_PORPP1.180e-1846.81Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3IER0_9FLOR2.290e-1848.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z0I0_PORPP4.820e-1848.91Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A5J4Z5T1_PORPP1.030e-1738.64Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TKP7_9RHOD1.640e-1748.28Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YS79_PORPP4.690e-1747.31Uncharacterized protein n=2 Tax=Porphyridium purpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018866Zinc-finger domain of monoamine-oxidase A repressor R1PFAMPF10497zf-4CXXC_R1coord: 590..663
e-value: 5.9E-5
score: 23.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..694
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_472_length_24489_cov_3.453562contigNODE_472_length_24489_cov_3.453562:21920..24058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1794.t1Gcaud1794.t1Gracilaria caudata M_176_S67 malemRNANODE_472_length_24489_cov_3.453562 21920..24058 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1794.t1 ID=Gcaud1794.t1|Name=Gcaud1794.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=713bp
MITQPLNVDAATTITTTTTTTRDDLNSFPLLNLDTTTNLSPLPHLPPTDA
KQPCHFDAVAIDNFVNEHASTCTPASATLHIQLDSDDEQPILPAVNLDEF
ANGTEHHAHAHPAIPSVHDILACNATSLAHDNGVVPTCEPMLNDGSLLLK
EHLMACGTHNTYGDLDEENGMAHLLLDAPITDTATPQRRLDSVEDSTAEQ
QHSKVQGARTGDDDMGPVLNPHMQDVSHVISYIYSQQALNDSDGALLMDM
VTSGATGEELKRWCVKFDVQDLCKQHGVELNVENSIKFTQLFRRGWKFDS
DAHTTRRAVAIPATPPATPPAAPPAAPPAASPAAQPSAESIAPPTEPTAQ
SPVETLCQNAAARSNCEASAVTESADIEGLLTLPPSEADEDEARQQELTS
CVRIDDGTHAVSQAGTAEEALLDGDALLMVQEYEPKHLSDDNMLDLLDVS
DSNARLHAMVHHMGDELGALHGAHATLADAADAAAAATVGSSTPRQCASP
SPPAQGSVLAAADAEQQEAGAELLEWGLPRAWAITSAEVTPTRTPPPEPR
CGEHKRTADVALNVSDEELLRTRPKKKRRAAKFEKPVPSRFCHVCSRTPK
NVRLAVCARIREGTCRKVICEKCFAKYAYGNFDAALRLTSAWLCPHCRDA
CPQRAQCRTYQRINDRLRVSRLRQESAKRGAPETPTDQPRARKRGRRGAA
SRAMGGEPHARV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018866Znf-4CXXC_R1