Gcaud7879.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7879.t1
Unique NameGcaud7879.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1173
Homology
BLAST of Gcaud7879.t1 vs. uniprot
Match: A0A2V3IGE0_9FLOR (RNA polymerase II-associated protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGE0_9FLOR)

HSP 1 Score: 881 bits (2277), Expect = 2.330e-300
Identity = 533/1199 (44.45%), Postives = 745/1199 (62.14%), Query Frame = 0
Query:    1 MPAPSPNHLRERAAALNSQEDLLRDQLEFFRENNAVECSSDTDPRFLEEQYFAAASRASNVETDSSALLPTIGERLVPRRGRPRRKRRNNTQVSVATPFPQSFPVDLSRPSVFAKREEE----KHGAVTAEMPSSSDMSPSSTHKTVSTEDKVSEKQFQSSASGLTPAQEASSMLAAMSPQQIREAQQAIYETLSPESILFLKQRSSR--------KIPLQSRSSHSRP-------SETVFSPGTSQTLT----TLSEE-NELHQNATEAKQREEEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILEPMLKSDGIRLVFSRFPASETFHRALTNQVAYLEAVECLLRQFGWIEQHTLFRDHYFASKFYSPVLLHENEPSLFSILSERHCIGTLIEIAKARCTASSSIEYSKRALNAVRMIVVSSQGASQMILNEEESTSPPRLLDSLMQLAIGWDKLDPSTTMLSCDIIANIFVNAAWVRKDRDQESVKLPFSEDFLMETAAHLNWVLKDSPFELNSAKQEAAKGVLRLFRAYLSQGCGVQCVSAFLQAICRLVQEADDNIGVEAYLLLEAYVHCLATRIMQTADKPYTYAFDKGSSSNAHAKEPSPAHFAMDHLSGLTPQVVTAAKIVVTPESRHSISRRAAAGHFVATMLTVTLIPFDETYYSQAKCVASEVNFLIAKSDLDTVLGLKDSQTLASLSHAIARILNGKLLERSFASREVELLVNAADREKKSL-SKKSGRKGTWRLIANACAEWMGLLSRLEST--LSIVQTASVLLSCLSDVQVILDLISRCILRKEILLNLRHATKASEAEQIARKFIPLTWKLINDSGELRSMQLQKIGDP-HNGPVLVSLDSLIGLWLKHDGLTLEGLILCQTLFQATLVDNSLLFESLIGIRPNQCTAPPTLFDLILQVGNACFEREGRLITSVTNTKQSSLSTSMDSQFFNSVMNLADQLVARGPMPVTCSR-KMVDSLGSIVLSIMCGLEADSTLRQKIWNRCVQECGGAALFKDAVFVQGTELDTTSADTCLEKEDMMHKYVSAIGESFLDPGRCPEIMRRIVLSRLSAYLLFPVKTAALESMLQSLSPASRERIYDKLCHFLAVEGGDSFKSLAKWVQD 1170
            MPAP+P  +R RA+AL+S EDLLRDQLEF R+++A+   S+  P  L+E+Y AA S A+  ET SSALLP I ER V +R R RR+ ++ +  +    FP  F V  +  SVFA   +      H A+  E  S S  +PS+  K      + S      + + +T  QEASSMLAAMS QQIREAQQ IY TLSP+SI FLK+R ++        K PL    S S P        +   S G++ T +    +LS+       N+ E +Q  ++ ERAK +WMTDATE +QTQ  VDEVL  AVEDMGP A  RFDL GN+LT EQI ++PTHKGLHHHG++P  AGYTLADLL+LTRST+LSQR++AL+VL+ALI+ H + + EPML+S G++LVF+  PA++TFH A+TNQVAYLEAVE LL+     E++ L RD YF+S FYS  +  +    L  +L + HC+  L++IA A  T+ S++ ++KR+LNA R+IV+ +      ++ E++S    R+L++LMQLA+G DKL  STTML+CDI+A     + WV KD      +   SE+FL++ A HLNW L+DSPF+L   ++E AKGVLRLFR++L++  G   +SA++QAICRL  + D ++ VEAYL LEAYVHCL   +++  +     + D+    N    +     FA D + GL PQV+ AAK V       SI  RAAAGHFVA+ LT+T +PFD+++Y Q KCVA++ N  ++   + T    +  Q LASLSH+IAR+L     +  F  RE   L+N A++EK  L +  +  KG  R+ ANACAEWMGL S  +    L +++ AS LL+CL+D QVILDL+SRCILRK  LL++      +EAE+IA+K +PLTW L+           + I D   +   + S+D+L   W+ HD  + E +  C+ LFQ  L+D  LLFE++I    +       LF  +  VG +C +  G LI   + T  SSLSTS+DS F  SV+ L DQLV+RGP  ++ +  K +D L S++L+IMCGLEAD TLR  +W RCV++CGGAALF +A F+    +  ++A+  LE+E+MM KY++A+G   L+  RCP+ M  I+  R+  +         L+++L SLS A+R R    +C F     G+  KS+  W+Q+
Sbjct:    1 MPAPTPTQMRARASALHSHEDLLRDQLEFLRDSHAL---SEHVPSHLDERYLAALSNATESETQSSALLPPIEERSVGKRSRARRRNQSASSRTPQQSFPTPFQVKPNTASVFAAASQHATNPSHPALRQEQQSHSGEAPSANPK------RDSSNPTNGNHAAVTLKQEASSMLAAMSVQQIREAQQQIYSTLSPQSIAFLKKRRAKSSPVSNEPKPPLPPAVSPSLPPGGTDSIQKQQLSRGSAHTASPKSASLSDSFKRSPHNSNEHQQDADQFERAKSMWMTDATEPLQTQTVVDEVLSAAVEDMGPIATERFDLTGNVLTAEQIQSLPTHKGLHHHGTSPASAGYTLADLLVLTRSTVLSQRIVALRVLTALISLHAEHVTEPMLRSGGMKLVFAPLPAADTFHSAITNQVAYLEAVEALLQPVPSFEENMLVRDLYFSSDFYSSHIQQQPTSPLVQVLGQVHCVTVLLDIASALHTSISTLSFAKRSLNACRIIVLKASDLVLRVIKEQDSPPVSRILNTLMQLAVGKDKLSSSTTMLACDILALFISKSNWVEKDAISSFDERVLSENFLLDVAVHLNWALRDSPFQLRGLERETAKGVLRLFRSFLTRANGYSAISAYVQAICRLTYDVDGDVTVEAYLTLEAYVHCLTLNVLEDPNP----SEDQKDFDNRKGNDKRKNEFAKDQIVGLIPQVLKAAKAVAGNGKSMSILHRAAAGHFVASALTLTPVPFDKSFYEQLKCVAAQSNREMSCMVITTAEDFRACQALASLSHSIARLLKWANNDSGFVKREARHLLNVANKEKTFLDADATAVKG--RVAANACAEWMGLNSLFKPICILLMMREASGLLACLNDAQVILDLLSRCILRKGCLLSVGGGITPTEAERIAKKLLPLTWTLLTKDDHFGLSAPKAIKDRVRDDKTVASIDALAYAWMLHDKASFESISACKILFQGGLLDRPLLFETVIEASVHASPHASLLFHFLFDVGQSCIDSGGYLIRPSSKTGMSSLSTSVDSNFSTSVLRLTDQLVSRGPPSLSSADGKNIDHLASVILTIMCGLEADFTLRGNMWKRCVEDCGGAALFMNAHFMYS--IGKSNANIPLEQEEMMVKYMNAMGSGLLEHSRCPDTMIEIIYWRMYDFSQTCSGRLTLDNLLLSLSHATRIRATRTICQFSTSTSGNHCKSIMAWMQN 1182          
BLAST of Gcaud7879.t1 vs. uniprot
Match: R7QQ98_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ98_CHOCR)

HSP 1 Score: 517 bits (1332), Expect = 2.030e-162
Identity = 343/993 (34.54%), Postives = 524/993 (52.77%), Query Frame = 0
Query:  174 MSPQQIREAQQAIYETLSPESILFLKQRSSRKIPLQSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQREEEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILEPMLKSDGIRLVFSRFPASETFHRALTNQVAYLEAVECLLRQFGWIEQHTLFRDHYFASKFYSPVLLHENEPSLFSILSERHCIGTLIEIAKARCTASSSIEYSKRALNAVRMIVVSSQGASQMILNEEESTSPPRLLDSLMQLAIGWDKLDPSTTMLSCDIIANIFVNAAWVRKDRDQESVKLPFSEDFLMETAAHLNWVLKDSPFELNSAKQEAAKGVLRLFRAYLSQGCGVQCVSAFLQAICRLVQEADDNIGVEAYLLLEAYVHCLATRIMQTADKPYTYAFDKGSS--SNAHAKEPSPAH---FAMDHLSGLTPQVVTAAKIVVTPESRHSISRRAAAGHFVATMLTVTLIPFDETYYSQAKCVASEVNFLIAK-SDLDTVLGLKDSQTLASLSHAIARILNGKLLERSFASREVELLVNAADREKKSLS-KKSGRKGTWRLIANACAEWMGLLSRLESTLSIVQTASVLLSCLSDVQVILDLISRCILRKEILLNLRHATKASEAEQIARKFIPLT----WKLINDSGELRSMQLQKIGDPHNGPVLVSLDSLIGLWLKHDGLTLEGLILCQTLFQATLVDNSLLFESLIGIRPNQCTAPPTLFDLILQVGNACFEREGRLITSVTNTKQSSLSTSMDSQFFNSVMNLADQLVARGPMPVTCSRKMVDSLGSIVLSIMCGLEADSTLRQKIWNRCVQECGGAALFKDAVFVQGTELDTTSADTCLEKEDMMHKYVSAIGESFLDPGRCPEIMRRIVLSRLSAYLLF--PVKTAALESMLQSLSPASRERIYDKLCHFL 1153
            M+PQQI EAQ+ I   LSP++I FLK RS R  P  +  S S    T  S                          ++ VE+ KRLWMTDA   +++   VD +L KA+  +GP A  RFDL G+ LT  QI  +PTH GLHHHG+ P  AGYTLADLL+LTRST+L QRVLAL++L+AL+ +HG  +  P+++S G+ L F+ FP+   F  ALTN++A++EAVE L++    + Q  L    Y AS+FYSP L H   P + S+L+E  C+  L+ IA+   + + + +++ RAL  VR IV  S  +S+ +L    ++       ++ QL +G D L P T +L+CD ++   VNAAW   +  +      FS+ F+      L W L+D+    +    +AAKG LR+ RA L+   G+   ++   A+CRL  E  + +  EAYL LEAY HCL T +    +       +KG +  S     +P P     FA D LSGL P  + A+++ V+     +  R+AAAGHFVAT+L +  IP D T   +     S  +  IA  S+  T  GL   Q  ASLSHA AR L    +++ +  REV+ L+    RE + L   + G K  WR  +NACAEW+GL +++ S ++ V+ A  L+  +SD Q+I+D+++RC+LR   L ++  +    +A + +   +PL     W+L + +     +     GD     +LV  + L  +W+KH+G       +    F+  ++   +LF  L+          P LF L+ +  +    R   L  S  +T  S++STS DS     ++ +AD LV RGP+  T      D L +++L+IMC  EAD +LR  +W + V+ECGGA LF+ A+F+      +  A      + +M +Y +A+    L   RCP ++  I++  ++A +    P    AL ++ ++L    R R +  L   L
Sbjct:    1 MTPQQILEAQREIASVLSPDNIAFLKNRS-RPAPSPTPLSDSHSPSTPLSA-------------------------DDHVEQQKRLWMTDACVPLESDTSVDSLLSKALHALGPLASHRFDLKGHSLTPHQIAHLPTHLGLHHHGAEPASAGYTLADLLLLTRSTVLGQRVLALRILTALLQNHGSSVSAPLVESGGLALAFAPFPSRLNFEAALTNRIAFIEAVEALVKPHSHLAQDCLVPSFYLASRFYSPNL-HLRPPPVLSVLAESACVPVLVNIARHDASNTETEQFALRALAMVRAIVTFSAKSSRDMLVGRATSQ------AMQQLCLGRDTLRPITALLACDALSQAIVNAAWSDPELVKSLDDSCFSDTFMRRVTQPLTWFLRDASVRPSECHFQAAKGALRMLRACLTFQRGLMPFTSCAPAVCRLAHEGVE-LSAEAYLALEAYTHCLYTTVSSEGNGKDDQGVEKGRTAPSPGAVSKPPPGEQLQFAKDQLSGLVPIALEASRVFVSSAQSENPLRKAAAGHFVATLLAIAAIPLDPTVMRKILSQCSVASETIASFSESVTTDGLDTLQAQASLSHAGARTLARVQVDQEYVQREVKRLMIGVKREFRCLDGNREGLKFPWRPASNACAEWIGLFAKVSSGVNAVKMAMDLIPWISDPQIIIDILARCVLRATCLTDINPSLTVEQARKCSEDLLPLAQTDLWELSSRTDPPSGLPSVSSGDRTEHKLLVDPEDLGSMWVKHEGAIDYFFFVATGWFEKEILAPDVLFRILLKSPSAWYETSPKLFPLLQRTASEAIRRGTTLFRSKYDTTLSTISTSPDSDLTTCLLGMADHLVTRGPVS-TEGHSQADPLATVILTIMCAPEADDSLRGALWKKTVEECGGAILFERALFLVDRSTKSYRARES-SADALMVRYCTAMKRGILTGPRCPPVLSAIIVMEMAAQIESRDPDDPKALWTLKEALKDGPRTRFFYALQEML 957          
BLAST of Gcaud7879.t1 vs. uniprot
Match: A0A329RN83_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RN83_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.330e-13
Identity = 72/206 (34.95%), Postives = 106/206 (51.46%), Query Frame = 0
Query:  174 MSPQQIREAQQAIYETLSPESILFLKQR-------------SSRKIPL-QSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQREEEVERAKRLWMTDATETVQTQE--HVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILE 363
            MSPQ+I EAQQ +  TL P+ +  LK R             + +K+ + +S   H    E V      ++L  +  E ELH+ +      E    RAK  W    T+T +T E  H  ++ +  VED   A + RFDLDG +L       +P H GL HHG  P+ AGYTL +LL L RS++ SQR +AL V++ ++  H +++ E
Sbjct:  143 MSPQEILEAQQELLRTLDPKLVEKLKSRRKKEKKREENVVKAGKKVSIGESIVKHDEEKEQVQKEEMIKSLAAVKTEEELHEQSKLLPAEE----RAKLDW----TQTTKTDEKAHGKKISRPVVED---ATLERFDLDGKMLDATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSMASQRAMALNVVAKIL--HNRQLQE 334          
BLAST of Gcaud7879.t1 vs. uniprot
Match: A0A1X2H0E3_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H0E3_SYNRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.710e-13
Identity = 71/186 (38.17%), Postives = 89/186 (47.85%), Query Frame = 0
Query:  169 SMLAAMSPQQIREAQQAIYETLSPESILFLKQRSSRKIPLQSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQREEEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALI 354
            S L AMS Q++ EA+Q +   LSPESI  L  R  +     S S  +R                        Q A E K  E+  ER K  WM  + +     E VDE  Q +V         RFDL GNI+       +P HKGLHHHG  P+ AGYTLA+LL L RST+ SQR + L  LS ++
Sbjct:  229 SRLDAMSEQELEEARQEVLSQLSPESISILLNRPKKPAVYSSPSVAAR------------------------QTAQEQKAAEQ-AERDKLAWMDTSLQPPPLPEAVDE--QDSV-----YRRVRFDLQGNIMDASV--DVPRHKGLHHHGDEPDKAGYTLAELLYLVRSTVASQRAMVLTTLSRIL 380          
BLAST of Gcaud7879.t1 vs. uniprot
Match: V9ET35_PHYPR (Uncharacterized protein (Fragment) n=9 Tax=Phytophthora TaxID=4783 RepID=V9ET35_PHYPR)

HSP 1 Score: 84.7 bits (208), Expect = 9.020e-13
Identity = 87/289 (30.10%), Postives = 128/289 (44.29%), Query Frame = 0
Query:   92 QVSVATPFPQSFPVDLSR---PSVFAKREEEKHGAVTAEMPSSSDMSPSSTHKTVSTEDKVSEKQFQSSASGLTPAQEASSMLAAMSPQQIREAQQAIYETLSPESILFLKQRSSR-------------KIPL-QSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQREEEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILE 363
            Q  V TP P  FP    R    S+F +R  E                       V  +++  EK     +  +  A +A   L  MSPQ+I EAQQ +  TL PE +  LK R+ +             K+ + +S   H   +E +      ++L  +  E EL + A      E    RAK  W    T+T +  E V    + A+     A + RFDLDG +L       +P H GL HHG  P+ AGYTL +LL L RS++ SQR +AL V++ ++  H +++ E
Sbjct:   81 QSFVFTPKPSGFPSVKRRGPGQSLFGRRRRE-----------------------VKAKEQEQEKHVDQESKDIDAANKAK--LQEMSPQEILEAQQELLRTLDPELVKKLKNRNKKERKREENMVKTRNKVAIGESIMKHDEGNEQIQKEEMIKSLAAVKTEEELKEQAKLLPAEE----RAKLDW----TQTTKKDEKVANGKKIALPVAEDATLERFDLDGKLLEATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRAMALNVVAKIL--HNRQLQE 333          
BLAST of Gcaud7879.t1 vs. uniprot
Match: W2MZU9_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MZU9_PHYPR)

HSP 1 Score: 84.0 bits (206), Expect = 9.760e-13
Identity = 69/204 (33.82%), Postives = 102/204 (50.00%), Query Frame = 0
Query:  174 MSPQQIREAQQAIYETLSPESILFLKQRSSR-------------KIPL-QSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQREEEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILE 363
            MSPQ+I EAQQ +  TL PE +  LK R+ +             K+ + +S   H   +E +      ++L  +  E EL + A      E    RAK  W    T+T +  E V    + A+     A + RFDLDG +L       +P H GL HHG  P+ AGYTL +LL L RS++ SQR +AL V++ ++  H +++ E
Sbjct:  141 MSPQEILEAQQELLRTLDPELVKKLKNRNKKERKREENMVKTRNKVAIGESIMKHDEGNEQIQKEEMIKSLAAVKTEEELKEQAKLLPAEE----RAKLDW----TQTTKKDEKVANGKKIALPVAEDATLERFDLDGKLLEATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRAMALNVVAKIL--HNRQLQE 333          
BLAST of Gcaud7879.t1 vs. uniprot
Match: A0A2P4YLX9_9STRA (RNA polymerase II-associated protein 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLX9_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.150e-12
Identity = 69/200 (34.50%), Postives = 101/200 (50.50%), Query Frame = 0
Query:  174 MSPQQIREAQQAIYETLSPESILFLKQRSSRKIPLQSRSSHSRPSETVFSPGTSQTLTTLSEENELHQ-----NATEAKQREEEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMG-----PAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILE 363
            MSPQ+I EAQQ +  TL P  I  LK R         R S ++    V      +++  + E+ +L +     N    K  EE  E+ KRL   +  +   TQ   D+   KA + M       A + RFDL+G +L       +P H GL HHG  P+ AGYTL +LL L RS++ SQR +AL V++ ++  H +++LE
Sbjct:  139 MSPQEILEAQQELLRTLDPTLIEKLKNR---------RKSGNKREREVKKVVAGESVVRMEEDEQLQKEEMIKNLAAVKTEEELKEQTKRLPADERAKLDWTQNVKDKKDSKAAKKMARPVAEDATLERFDLEGKMLEATDAE-LPVHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRAMALIVVAKIL--HNRQVLE 326          
BLAST of Gcaud7879.t1 vs. uniprot
Match: A0A3M6VC20_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC20_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.050e-12
Identity = 68/213 (31.92%), Postives = 107/213 (50.23%), Query Frame = 0
Query:  168 SSMLAAMSPQQIREAQQAIYETLSPESILFLKQRSSRKIPLQSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQR---------EEEV----------ERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRI 361
            S+ L  MSPQ+I EAQQ +  +L P+ I   K R  +    + + S ++   T     T  ++    +E +  +   + ++R         EEE+          ERAK  W     ET +  E   +V +   ED   A + RFDLDG +L    ++ +P H GL HHG  P+ AGYTL +LL L RS++ SQR +AL V++ ++  H +++
Sbjct:  132 SAALQEMSPQEIEEAQQELLRSLDPKLIEKFKNRRKKNDTKEMKQSENQVISTEKKTMTIGSVIKYEQEADEEKGQIQKEERIKSLAAVKTEEELKQQVELLPEEERAKLEWTQSTKETTKKFERGKKVARPMAED---ATLERFDLDGKVLAATDLD-LPKHSGLFHHGDDPDAAGYTLPELLHLARSSMASQRAMALNVVARVL--HNRQL 338          
BLAST of Gcaud7879.t1 vs. uniprot
Match: A0A225WWZ8_9STRA (RNA polymerase II-associated protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWZ8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.530e-12
Identity = 99/358 (27.65%), Postives = 155/358 (43.30%), Query Frame = 0
Query:   22 LLRDQLEFFRENN--AVECSSDTDPRFLEEQYFAAASRASNVETDSSALLPTIGERLVPRRGRPRRKRRNNTQVSVATPFPQSFPVDLSR---PSVFAKREEEKHGAVTAEMPSSSDMSPSSTHKTVSTEDKVSEKQFQSSASGLTPAQEASSMLAAMSPQQIREAQQAIYETLSPESILFLKQRSSRKIPLQSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQREE---------EVERAKRLWM--TDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALITSHGQRILE 363
            LLR+Q +F R+    A + S    P  +     + +S AS    +   +L  + ER V   G+         Q  V  P P  FP    R    S+F +R  E     T +                  + +  EK     +  +  A  A   L  MSPQ+I EAQQ +  TL P  +  LK R  R    ++ +  ++    V        +   +++ +L +N    K  EE           ERAK  W   T+  +  ++  H  ++ +   ED   A + RFDLDG +L     + +P H GL HHG  P+ AGYT+ +LL L RS++ SQR +AL V++ ++  H +++LE
Sbjct:   19 LLREQEQFLRQKKQPAAKVSRRGAPATVSASSSSXSSVASPA-VEGPQVLKGVVERQVTPVGQ---------QSFVFAPKPSGFPSVKRRGPGQSLFGRRRREAKAGATQK------------------DTQEQEKPLDQESKDIDAANRAK--LQEMSPQEILEAQQQLLRTLDPTLVAKLKNRRKRVKTSETMAVKTKRKVEVGKSVVKDEVEGQAQKEKLIKNLAAVKTEEELKEQTKLLPAEERAKLDWTHNTEDKKNSKSAGHGKKIARPVAED---ATLERFDLDGKMLEATDAD-LPVHSGLFHHGDDPDAAGYTVPELLHLARSSVASQRAMALIVVAKIL--HNRQLLE 340          
BLAST of Gcaud7879.t1 vs. uniprot
Match: G5A9N0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A9N0_PHYSP)

HSP 1 Score: 79.3 bits (194), Expect = 4.030e-11
Identity = 70/210 (33.33%), Postives = 97/210 (46.19%), Query Frame = 0
Query:  174 MSPQQIREAQQAIYETLSPESILFLKQRSSRKIPLQSRSSHSRPSETVFSP--------------GTSQTLTTLSEENELHQN----ATEAKQREEEV----------ERAKRLWMTDATETVQTQE-HVDEVLQKAVEDMGPAAMARFDLDGNILTTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVLSALI 354
            MSPQ+I EAQQ +  TL PE +  LK R  +      +S  S  S                    G S     L +  ++ +     +  A + EEE+          ERAK  W     E    Q  H  ++ +  VED   A + RFD+DGN+L       +P H GL HHG  P+ AGYTL +LL L RS++ SQR LAL V++ ++
Sbjct:  143 MSPQEILEAQQELLRTLDPELVQKLKNRRKKSAQKTVKSERSAVSXXXXXXXXXXXXXXXXXXXXGASVVKEELEDREQVQKEELIKSLAAVKTEEELKEQTKLLPAEERAKLDWTQSTKEKKDGQAAHHKKIARPVVED---ATLERFDMDGNVLNATN-EELPAHSGLFHHGDDPDAAGYTLPELLHLARSSVASQRALALTVVAKIL 348          
The following BLAST results are available for this feature:
BLAST of Gcaud7879.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGE0_9FLOR2.330e-30044.45RNA polymerase II-associated protein 1 n=1 Tax=Gra... [more]
R7QQ98_CHOCR2.030e-16234.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A329RN83_9STRA2.330e-1334.95Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A1X2H0E3_SYNRA8.710e-1338.17Uncharacterized protein n=1 Tax=Syncephalastrum ra... [more]
V9ET35_PHYPR9.020e-1330.10Uncharacterized protein (Fragment) n=9 Tax=Phytoph... [more]
W2MZU9_PHYPR9.760e-1333.82Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A2P4YLX9_9STRA1.150e-1234.50RNA polymerase II-associated protein 1 (Fragment) ... [more]
A0A3M6VC20_9STRA2.050e-1231.92Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A225WWZ8_9STRA3.530e-1227.65RNA polymerase II-associated protein 1 n=1 Tax=Phy... [more]
G5A9N0_PHYSP4.030e-1133.33Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableCOILSCoilCoilcoord: 233..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..253
IPR013929RNA polymerase II-associated protein 1, C-terminalPFAMPF08620RPAP1_Ccoord: 291..354
e-value: 5.6E-22
score: 77.5
IPR013930RNA polymerase II-associated protein 1, N-terminalPFAMPF08621RPAP1_Ncoord: 165..204
e-value: 6.5E-8
score: 32.2
IPR039913RNA polymerase II-associated protein RPAP1/Rba50PANTHERPTHR21483RNA POLYMERASE II-ASSOCIATED PROTEIN 1coord: 19..693

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_465_length_24681_cov_4.375641contigNODE_465_length_24681_cov_4.375641:272..3790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7879.t1Gcaud7879.t1Gracilaria caudata M_176_S67 malemRNANODE_465_length_24681_cov_4.375641 272..3790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7879.t1 ID=Gcaud7879.t1|Name=Gcaud7879.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1173bp
MPAPSPNHLRERAAALNSQEDLLRDQLEFFRENNAVECSSDTDPRFLEEQ
YFAAASRASNVETDSSALLPTIGERLVPRRGRPRRKRRNNTQVSVATPFP
QSFPVDLSRPSVFAKREEEKHGAVTAEMPSSSDMSPSSTHKTVSTEDKVS
EKQFQSSASGLTPAQEASSMLAAMSPQQIREAQQAIYETLSPESILFLKQ
RSSRKIPLQSRSSHSRPSETVFSPGTSQTLTTLSEENELHQNATEAKQRE
EEVERAKRLWMTDATETVQTQEHVDEVLQKAVEDMGPAAMARFDLDGNIL
TTEQINAIPTHKGLHHHGSAPECAGYTLADLLILTRSTILSQRVLALKVL
SALITSHGQRILEPMLKSDGIRLVFSRFPASETFHRALTNQVAYLEAVEC
LLRQFGWIEQHTLFRDHYFASKFYSPVLLHENEPSLFSILSERHCIGTLI
EIAKARCTASSSIEYSKRALNAVRMIVVSSQGASQMILNEEESTSPPRLL
DSLMQLAIGWDKLDPSTTMLSCDIIANIFVNAAWVRKDRDQESVKLPFSE
DFLMETAAHLNWVLKDSPFELNSAKQEAAKGVLRLFRAYLSQGCGVQCVS
AFLQAICRLVQEADDNIGVEAYLLLEAYVHCLATRIMQTADKPYTYAFDK
GSSSNAHAKEPSPAHFAMDHLSGLTPQVVTAAKIVVTPESRHSISRRAAA
GHFVATMLTVTLIPFDETYYSQAKCVASEVNFLIAKSDLDTVLGLKDSQT
LASLSHAIARILNGKLLERSFASREVELLVNAADREKKSLSKKSGRKGTW
RLIANACAEWMGLLSRLESTLSIVQTASVLLSCLSDVQVILDLISRCILR
KEILLNLRHATKASEAEQIARKFIPLTWKLINDSGELRSMQLQKIGDPHN
GPVLVSLDSLIGLWLKHDGLTLEGLILCQTLFQATLVDNSLLFESLIGIR
PNQCTAPPTLFDLILQVGNACFEREGRLITSVTNTKQSSLSTSMDSQFFN
SVMNLADQLVARGPMPVTCSRKMVDSLGSIVLSIMCGLEADSTLRQKIWN
RCVQECGGAALFKDAVFVQGTELDTTSADTCLEKEDMMHKYVSAIGESFL
DPGRCPEIMRRIVLSRLSAYLLFPVKTAALESMLQSLSPASRERIYDKLC
HFLAVEGGDSFKSLAKWVQDAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013929RNA_pol_II_AP1_C
IPR013930RNA_pol_II_AP1_N
IPR039913RPAP1/Rba50