Gcaud7884.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7884.t1
Unique NameGcaud7884.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length623
Homology
BLAST of Gcaud7884.t1 vs. uniprot
Match: A0A2V3IEM1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM1_9FLOR)

HSP 1 Score: 192 bits (488), Expect = 9.710e-50
Identity = 223/616 (36.20%), Postives = 316/616 (51.30%), Query Frame = 0
Query:    1 MASNQQNKLREAHSLEKKVLLHNDIDAVVELGALLLFDQD------FVSQRARGFQMLERAIKQAQDPVAMFGVAVHLLNNGDDKDHCRAVSLLESSLKLREDHFVVYRLALCYVHGEGVEQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLGMLYHCGNGNLSRCPKRASKWYRRAIRTSRLPESMRNLAVLHLDNNPGA-EDIHRAVRLLEDALEQYQGQDEETMLKLAELYSVHD--IDFERAVQLYETAAVRFNSKTAKCVLYGSWVDGVGDIHLDHSHIYDYCREDMK-KNKDIASFLVLVSMTWSGTREFRMNRKRAVEVYYASVSNKTKHSLFSLMLRHDFNHIRGGERCARRFMTKFNDNIDKSNLLGEESVVLSESCYESDKLLALESFRAQIAWKDSFHLIAWLAPYLRIGRCNLPFDGSLGCITDTIRRFTRWKYIASLNLACLLLEIEGRQQE----AVKVLEDMMNGDLRLIAMLNLAYIFMNDDCGVTKDWARGMQLLEDSVKETNDVSARAMLANALTEKSESTGSDVERG-WKLWRSVEDEXXXXELSKLRRLISVRTDEKWSALALQ 601
            M+ N  + ++ A   E+ +   ND+DA+++LG +LL  +       +     RG Q+LERA+KQA +P A   +A+H  + G+ K   R VSLLE + +   D   ++ LA     G+  E+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ++L  LYH G  NL    + A KWY+R+I      +S   LA L L+   G   D  RA  LLEDAL Q     E +++ LA +Y+VH    +  RA  L E A   F S  A   L      G     LDH      C   +   N      +++ S+ WSG+   R++R+RA++V  A         +F+LMLR+D        + A  + T F      + L  E+     +S  +++++  L   R  +   D    + W+  Y+R     LP+ G   C T  + RF     I SLNLA LLL+   +  E    A+ +LE +M  +LR IA +NL Y+      G+ +D  R +++L   + ET DVSAR +LA+ L E++  +  ++E   W L     +     EL KL RL+S +    W    LQ
Sbjct:    1 MSLNNLSAVQLAKRYERAIKRFNDVDAMIQLGHMLLSGRHSSGAVGYKIDHCRGVQLLERAVKQADNPRAKALLALHFRDFGNKKQRRRVVSLLEDAFRQMGDPVSLHVLAKVLYDGDCGEKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNESDIMHRLARLYHEGTVNLEPSFENAVKWYQRSIDVGEHCDSKYYLARLLLETPVGEYRDPTRAALLLEDALTQ--SYTERSLICLANVYTVHRQVANIPRAAYLLERAVCDFGSTAATVHLLNFCAFGFQGFPLDHQRAILICERHLSCTNPHRTVMMIMASILWSGSVSVRVDRERAIQV--ARQIENDHGIMFALMLRYDAPSRPADRKLAASYFTNFRHCYVNALLTSEQEDPRFDSV-QAEQMFRLA--RGNLLGTD---YLGWIPLYIRKSTLGLPYHGDERCFTKNVMRFCSVANITSLNLASLLLDRTSKSPEQCAEAITILECLMETELRDIAAVNLCYVLWYGVGGIAQDQPRALKMLVRFIGETRDVSARVLLASTLAERANESNWNLESSSWTLSAIRAEISDEEELQKLARLLSPKA---WEVFTLQ 603          
BLAST of Gcaud7884.t1 vs. uniprot
Match: A0A2V3ITQ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 5.700e-49
Identity = 227/578 (39.27%), Postives = 321/578 (55.54%), Query Frame = 0
Query:   28 VVELGALLLFDQDFVSQRARGFQMLERAIKQAQDPVAMFGVAVHLLNNGDDKDHCRAVSLLESSLKLREDHFVVYRLALCYVHGEGVEQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLGMLYHCGNGNLSRCPKRASKWYRRAIRTSRLPESMRNLAVLHLDNNPGA-EDIHRAVRLLEDALEQYQGQDEETMLKLAELYS--VHDIDFERAVQLYETAAVRFNSKTAKCVLYGSWVDGVGDIHLDHSHIYDYCREDMKKNKDIASFLVLVSMTWSGTREFRMNRKRAVEVYYASVSNKTKHSLFSL--MLRHDFNHIRGGERCARRFMTKFNDNIDKSNLLGEESVVLSES--CYESDKLLALESFRAQIAWKDSFHLIAWLAPYLRIGRCNLPFDGSLGCITDTIRRFTRWKYIASLNLACLLLEIEGR----QQEAVKVLEDMMNGDLRLIAMLNLAYIFMNDDCGVTKDWARGMQLLEDSVKETNDVSARAMLANALTEKSESTGSDVERGWKLWRSVED-EXXXXELSKLRRLISVRTDE 593
            ++ L  LL++ +D+  +  RG QMLERAIKQA  P+AM+ +A + L+ G    + +AV+LLE SL   ED  V++ L+     G GV +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN LG+++  G  +     +RA KW+ RAI    LP +  NLAV+    +     D  RA  LLE+ +E+   Q    +L+LAELYS  +  +++ RAV L   A   FNS  A+  L      G G +    +          +K  DI S L L  M WSGT E   + +R+V +    +  KT    + L  MLR+    +    + A     +   + D   +L   +++LSE     +SD   A+E FRA            WL   LR    +LP  G+  CIT++++R+     IA LNLA LL+E         +EAV++LE +++  +  +A LNL Y+  N+  G+ +D  R   L E + +E N++  + +LANAL+E  +   SD ++  +LWRSVED      E+S+L  ++S +  E
Sbjct:    1 MIALANLLMYSEDYRDEE-RGIQMLERAIKQAGSPLAMYRLARYYLDFGSRSQYHKAVALLERSLHQSEDPAVLHLLSFAVASGLGVRRNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTHDKVMPDPSRAALLLEEVVEETGKQG--AILQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLARMLAFGEG-VPAQRATALGLFERHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLC-KQLCRKTDIGNYVLASMLRYGAPTLPRNLKQAITICEREKADDDHFIMLVH-AILLSEDPESNDSDISHAIELFRALSVDTPLQMWWVWLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLIDTRIGDLAALNLGYLLWNEVGGIPQDKERARALFERATEEDNNLVGKVLLANALSEGIDEEVSDADQVAELWRSVEDANKTNAEVSRLSSMLSDQAKE 572          
The following BLAST results are available for this feature:
BLAST of Gcaud7884.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEM1_9FLOR9.710e-5036.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITQ7_9FLOR5.700e-4939.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 155..277
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 155..277
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 4..181
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 153..277
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 210..245
e-value: 34.0
score: 9.1
coord: 502..538
e-value: 7.9
score: 14.6
coord: 249..281
e-value: 110.0
score: 4.4
coord: 172..208
e-value: 18.0
score: 11.5
coord: 98..133
e-value: 23.0
score: 10.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 504..527
e-value: 120.0
score: 3.6
coord: 175..204
e-value: 0.58
score: 10.9
coord: 253..277
e-value: 180.0
score: 3.0
coord: 102..130
e-value: 0.7
score: 10.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..395
e-value: 6.6E-33
score: 115.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_465_length_24681_cov_4.375641contigNODE_465_length_24681_cov_4.375641:11975..13843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7884.t1Gcaud7884.t1Gracilaria caudata M_176_S67 malemRNANODE_465_length_24681_cov_4.375641 11975..13843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7884.t1 ID=Gcaud7884.t1|Name=Gcaud7884.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=623bp
MASNQQNKLREAHSLEKKVLLHNDIDAVVELGALLLFDQDFVSQRARGFQ
MLERAIKQAQDPVAMFGVAVHLLNNGDDKDHCRAVSLLESSLKLREDHFV
VYRLALCYVHGEGVEQCHSVAINLFQRALRLKQDPLVMYNLALTMLKVPN
LLSQKKQAISLFNKAIGLHPDAIMMNQLGMLYHCGNGNLSRCPKRASKWY
RRAIRTSRLPESMRNLAVLHLDNNPGAEDIHRAVRLLEDALEQYQGQDEE
TMLKLAELYSVHDIDFERAVQLYETAAVRFNSKTAKCVLYGSWVDGVGDI
HLDHSHIYDYCREDMKKNKDIASFLVLVSMTWSGTREFRMNRKRAVEVYY
ASVSNKTKHSLFSLMLRHDFNHIRGGERCARRFMTKFNDNIDKSNLLGEE
SVVLSESCYESDKLLALESFRAQIAWKDSFHLIAWLAPYLRIGRCNLPFD
GSLGCITDTIRRFTRWKYIASLNLACLLLEIEGRQQEAVKVLEDMMNGDL
RLIAMLNLAYIFMNDDCGVTKDWARGMQLLEDSVKETNDVSARAMLANAL
TEKSESTGSDVERGWKLWRSVEDEEDEEELSKLRRLISVRTDEKWSALAL
QQTEEESVEKPLKAKEEEFSSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf