Gcaud203.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud203.t1
Unique NameGcaud203.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length408
Homology
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BLAST of Gcaud203.t1 vs. uniprot
Match: A0A2V3IXF9_9FLOR (Hemolysin, chromosomal n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF9_9FLOR)

HSP 1 Score: 215 bits (547), Expect = 5.600e-58
Identity = 145/411 (35.28%), Postives = 214/411 (52.07%), Query Frame = 0 
Query:    4 EPYRFSLDINVRNLWLDVDLLEKG----VKVYTCKVPSRTRGMFSDLAVAQEFSLSFLQGIKLRGETKVGKQILEMISECFKEKRYNVTGARSVEHIVHASQVPGGYQVEDGNALIYGDRNYWRISGGEGDTIFKMSKYYMRVDTGTCRADGFHVVDIDRSTAGRLTFTLRGKTYLILNHFPIEKAKPSDEDGEPLPWSFNEEDPFVLSYLPYAHLPRVMWKVVRFNRMPFAFLFGSDDEYKVVHDPVHYCYRTNYLSYKPRLIVTAG-KVMLNVDDFNSNSLEIADWGRSFWFYTLDTSY-RPVTIARFETKRKLPADTALMDSFPSKRNAATHIAACTPGGIRFQDRSVAPNELVSY----IEGRVYLRNLVASTPAAEQETVESVLRQYDPNYELTQAIEIANNAIAI 404
            +P   SL I     +LDV LLE       ++  CKV S +      +AV+Q F +SF +G KL  E     ++   I +CF + +Y V  A +V  +V++S+    Y + DGNALIY DR    I G  G+ I K+S+  M V  G C ADG+ +V++        T +L  KTY+ILN +   + + +DE G  L   F E D FV+ +            V  FNRMPFA L G   EY V+ + + Y YRT  +++ PR+ ++A  +V+LN+ DFNS+ L + D     WFY  D+S  +  + A F+        T       + R  A  +A CTP GIRF+DR VAPNEL SY    +  + +L NL  S P  +  T E +LR  DP+ EL + ++   N++++
Sbjct: 1545 KPLHLSLHILNCTTYLDVTLLEGDGEDKEELCRCKVFSVSTSDIDAIAVSQHFQISFSRGFKLSDEVYDSAKVRNAIMKCFGDGKYTVLHAGNVSQVVYSSKRSSVYTLPDGNALIYADRENNHIFGRNGNNIVKVSESGMTVGPGICSADGYGIVEVMEGVTDT-TISLSSKTYVILNGYGFREVEATDEAGGLLSPDFGENDDFVIKHDGIT--------VATFNRMPFALLIGKLGEYVVLRNALEY-YRTP-VTFVPRIAISAANRVLLNIADFNSSDLCVGDKAGKVWFYNYDSSTDKQTSFATFDV-----GYTNSWHRDETARTGAALVATCTPAGIRFKDRFVAPNELESYFRELLPKQTHL-NLSTSNPIMDY-TFEDLLRNRDPSRELVEVVDTMKNSLSV 1937
The following BLAST results are available for this feature:
BLAST of Gcaud203.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXF9_9FLOR5.600e-5835.28Hemolysin, chromosomal n=1 Tax=Gracilariopsis chor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4618_length_2124_cov_4.782095contigNODE_4618_length_2124_cov_4.782095:85..1308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud203.t1Gcaud203.t1Gracilaria caudata M_176_S67 malemRNANODE_4618_length_2124_cov_4.782095 85..1308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud203.t1 ID=Gcaud203.t1|Name=Gcaud203.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=408bp
MRNEPYRFSLDINVRNLWLDVDLLEKGVKVYTCKVPSRTRGMFSDLAVAQ
EFSLSFLQGIKLRGETKVGKQILEMISECFKEKRYNVTGARSVEHIVHAS
QVPGGYQVEDGNALIYGDRNYWRISGGEGDTIFKMSKYYMRVDTGTCRAD
GFHVVDIDRSTAGRLTFTLRGKTYLILNHFPIEKAKPSDEDGEPLPWSFN
EEDPFVLSYLPYAHLPRVMWKVVRFNRMPFAFLFGSDDEYKVVHDPVHYC
YRTNYLSYKPRLIVTAGKVMLNVDDFNSNSLEIADWGRSFWFYTLDTSYR
PVTIARFETKRKLPADTALMDSFPSKRNAATHIAACTPGGIRFQDRSVAP
NELVSYIEGRVYLRNLVASTPAAEQETVESVLRQYDPNYELTQAIEIANN
AIAISSN*
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